RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 MYMXA0A1B0GTQ4 84 aa12.35□□□□□ -0.43
PDZRN3-201ENST00000263666 C1orf122Q6ZSJ8 110 aa12.35□□□□□ -0.43
PDZRN3-201ENST00000263666 IGHV3-16A0A0C4DH30 117 aa12.35□□□□□ -0.43
PDZRN3-201ENST00000263666 C5orf56Q8N8D9 126 aa12.35□□□□□ -0.43
PDZRN3-201ENST00000263666 ANKRD17O75179 2603 aaKnown RBP12.35□□□□□ -0.43
PDZRN3-201ENST00000263666 LYRM7Q5U5X0 104 aa12.35□□□□□ -0.43
PDZRN3-201ENST00000263666 ZFAND3Q9H8U3 227 aa12.35□□□□□ -0.43
PDZRN3-201ENST00000263666 IGLL5B9A064 214 aa12.34□□□□□ -0.43
PDZRN3-201ENST00000263666 DEFB136Q30KP8 78 aa12.34□□□□□ -0.43
PDZRN3-201ENST00000263666 AJUBAQ96IF1 538 aa12.34□□□□□ -0.43
PDZRN3-201ENST00000263666 TNFRSF18Q9Y5U5 241 aa12.34□□□□□ -0.43
PDZRN3-201ENST00000263666 CSMD1Q96PZ7 3565 aa12.33□□□□□ -0.43
PDZRN3-201ENST00000263666 IGHV3-38A0A0C4DH36 116 aa12.33□□□□□ -0.44
PDZRN3-201ENST00000263666 TRBV6-1A0A0K0K1D8 114 aa12.33□□□□□ -0.44
PDZRN3-201ENST00000263666 Q6ZS46 218 aa12.33□□□□□ -0.44
PDZRN3-201ENST00000263666 ZNF843Q8N446 348 aa12.33□□□□□ -0.44
PDZRN3-201ENST00000263666 ZNF625Q96I27 306 aaPredicted RBP12.33□□□□□ -0.44
PDZRN3-201ENST00000263666 CD28P10747 220 aa12.33□□□□□ -0.44
PDZRN3-201ENST00000263666 EDN2P20800 178 aa12.33□□□□□ -0.44
PDZRN3-201ENST00000263666 MRAP2Q96G30 205 aa12.33□□□□□ -0.44
PDZRN3-201ENST00000263666 TRAV8-2A0A0B4J237 113 aa12.32□□□□□ -0.44
PDZRN3-201ENST00000263666 C10orf99Q6UWK7 81 aa12.32□□□□□ -0.44
PDZRN3-201ENST00000263666 FAM223BA6NKX1 122 aa12.32□□□□□ -0.44
PDZRN3-201ENST00000263666 IGHV4-59P01825 116 aa12.32□□□□□ -0.44
PDZRN3-201ENST00000263666 AZU1P20160 251 aa12.32□□□□□ -0.44
PDZRN3-201ENST00000263666 FAM223AQ8IWN6 122 aa12.32□□□□□ -0.44
PDZRN3-201ENST00000263666 PTH2Q96A98 100 aa12.32□□□□□ -0.44
PDZRN3-201ENST00000263666 GEMIN7Q9H840 131 aaKnown RBP12.32□□□□□ -0.44
PDZRN3-201ENST00000263666 IGHV3-53P01767 116 aa12.32□□□□□ -0.44
PDZRN3-201ENST00000263666 GATD1Q8NB37 220 aa12.32□□□□□ -0.44
PDZRN3-201ENST00000263666 LINC01587Q99440 93 aa12.32□□□□□ -0.44
PDZRN3-201ENST00000263666 VCYO14598 125 aa12.31□□□□□ -0.44
PDZRN3-201ENST00000263666 LMO4P61968 165 aa12.31□□□□□ -0.44
PDZRN3-201ENST00000263666 C10orf105Q8TEF2 133 aa12.31□□□□□ -0.44
PDZRN3-201ENST00000263666 SIVA1O15304 175 aa12.3□□□□□ -0.44
PDZRN3-201ENST00000263666 PPP1R17O96001 155 aa12.3□□□□□ -0.44
PDZRN3-201ENST00000263666 IGHG4P01861 327 aa12.3□□□□□ -0.44
PDZRN3-201ENST00000263666 GATA3P23771 443 aa12.3□□□□□ -0.44
PDZRN3-201ENST00000263666 DEFB131AP59861 70 aa12.3□□□□□ -0.44
PDZRN3-201ENST00000263666 C16orf54Q6UWD8 224 aa12.3□□□□□ -0.44
PDZRN3-201ENST00000263666 UBE2E2Q96LR5 201 aa12.3□□□□□ -0.44
PDZRN3-201ENST00000263666 NDUFA4O00483 81 aa12.29□□□□□ -0.44
PDZRN3-201ENST00000263666 HIST2H2BCQ6DN03 193 aa12.29□□□□□ -0.44
PDZRN3-201ENST00000263666 RASL10AQ92737 203 aa12.29□□□□□ -0.44
PDZRN3-201ENST00000263666 DLX4Q92988 240 aaPredicted RBP12.29□□□□□ -0.44
PDZRN3-201ENST00000263666 IGHV7-4-1A0A0J9YVY3 117 aa12.28□□□□□ -0.44
PDZRN3-201ENST00000263666 CLPSL1A2RUU4 121 aa12.28□□□□□ -0.44
PDZRN3-201ENST00000263666 DEFB113Q30KQ7 82 aa12.28□□□□□ -0.44
PDZRN3-201ENST00000263666 PLEKHB2Q96CS7 222 aa12.28□□□□□ -0.44
PDZRN3-201ENST00000263666 U3KQK5 164 aa12.28□□□□□ -0.44
PDZRN3-201ENST00000263666 C11orf86A6NJI1 115 aa12.28□□□□□ -0.44
PDZRN3-201ENST00000263666 PRM2P04554 102 aa12.28□□□□□ -0.44
PDZRN3-201ENST00000263666 BAALCQ8WXS3 180 aa12.28□□□□□ -0.44
PDZRN3-201ENST00000263666 MDFICQ9P1T7 246 aa12.28□□□□□ -0.44
PDZRN3-201ENST00000263666 SUMO4Q6EEV6 95 aa12.28□□□□□ -0.44
PDZRN3-201ENST00000263666 C9JAW5 83 aa12.27□□□□□ -0.44
PDZRN3-201ENST00000263666 TMEM238C9JI98 176 aa12.27□□□□□ -0.44
PDZRN3-201ENST00000263666 C9orf47Q6ZRZ4 202 aa12.27□□□□□ -0.44
PDZRN3-201ENST00000263666 USMG5Q96IX5 58 aa12.27□□□□□ -0.44
PDZRN3-201ENST00000263666 GAGE12HA6NDE8 117 aa12.27□□□□□ -0.45
PDZRN3-201ENST00000263666 RRN3P1Q2M238 152 aa12.27□□□□□ -0.45
PDZRN3-201ENST00000263666 PMVKQ15126 192 aa12.27□□□□□ -0.45
PDZRN3-201ENST00000263666 RBAKDNA6NC62 111 aa12.26□□□□□ -0.45
PDZRN3-201ENST00000263666 HHLA3Q9XRX5 114 aa12.26□□□□□ -0.45
PDZRN3-201ENST00000263666 FOXI2Q6ZQN5 318 aa12.26□□□□□ -0.45
PDZRN3-201ENST00000263666 ZNF48Q96MX3 618 aaPredicted RBP12.26□□□□□ -0.45
PDZRN3-201ENST00000263666 PF4P02776 101 aa12.25□□□□□ -0.45
PDZRN3-201ENST00000263666 MEIG1Q5JSS6 88 aa12.25□□□□□ -0.45
PDZRN3-201ENST00000263666 CEMP1Q6PRD7 247 aaPredicted RBP12.25□□□□□ -0.45
PDZRN3-201ENST00000263666 A8MWV9 139 aa12.25□□□□□ -0.45
PDZRN3-201ENST00000263666 Q8N6K4 173 aa12.25□□□□□ -0.45
PDZRN3-201ENST00000263666 NRACQ8N912 160 aa12.25□□□□□ -0.45
PDZRN3-201ENST00000263666 TOMM7Q9P0U1 55 aa12.25□□□□□ -0.45
PDZRN3-201ENST00000263666 DEFB112Q30KQ8 113 aa12.25□□□□□ -0.45
PDZRN3-201ENST00000263666 C11orf71Q6IPW1 123 aa12.25□□□□□ -0.45
PDZRN3-201ENST00000263666 A0A0J9YXV3 536 aa12.24□□□□□ -0.45
PDZRN3-201ENST00000263666 LGALS1P09382 135 aaKnown RBP12.24□□□□□ -0.45
PDZRN3-201ENST00000263666 ERG28Q9UKR5 140 aa12.24□□□□□ -0.45
PDZRN3-201ENST00000263666 G3V4G9 280 aa12.24□□□□□ -0.45
PDZRN3-201ENST00000263666 P0DMU3 169 aa12.24□□□□□ -0.45
PDZRN3-201ENST00000263666 FAM231AP0DMU4 169 aa12.24□□□□□ -0.45
PDZRN3-201ENST00000263666 FAM231CP0DMU5 169 aa12.24□□□□□ -0.45
PDZRN3-201ENST00000263666 ZFP2Q6ZN57 461 aa12.24□□□□□ -0.45
PDZRN3-201ENST00000263666 ZFAND2AQ8N6M9 145 aa12.24□□□□□ -0.45
PDZRN3-201ENST00000263666 XCL2Q9UBD3 114 aa12.23□□□□□ -0.45
PDZRN3-201ENST00000263666 J3QQQ9 107 aa12.23□□□□□ -0.45
PDZRN3-201ENST00000263666 INSL3P51460 131 aa12.23□□□□□ -0.45
PDZRN3-201ENST00000263666 TMEM190Q8WZ59 177 aa12.23□□□□□ -0.45
PDZRN3-201ENST00000263666 Q8N1Y9 231 aa12.23□□□□□ -0.45
PDZRN3-201ENST00000263666 PAPPA-AS1Q5QFB9 102 aa12.22□□□□□ -0.45
PDZRN3-201ENST00000263666 C20orf78Q9BR46 151 aa12.22□□□□□ -0.45
PDZRN3-201ENST00000263666 A0A1B0GV72 72 aa12.22□□□□□ -0.45
PDZRN3-201ENST00000263666 SVEP1Q4LDE5 3571 aa12.22□□□□□ -0.45
PDZRN3-201ENST00000263666 SPINK8P0C7L1 97 aa12.22□□□□□ -0.45
PDZRN3-201ENST00000263666 TCTEX1D4Q5JR98 221 aa12.22□□□□□ -0.45
PDZRN3-201ENST00000263666 IGHV1OR15-1A0A075B7D0 117 aa12.21□□□□□ -0.45
PDZRN3-201ENST00000263666 HECTD1Q9ULT8 2610 aa12.21□□□□□ -0.45
PDZRN3-201ENST00000263666 F8W1H4 67 aa12.21□□□□□ -0.46
PDZRN3-201ENST00000263666 EBI3Q14213 229 aa12.21□□□□□ -0.46
PDZRN3-201ENST00000263666 TRAV13-1A0A0B4J241 112 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms