RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 UBE2D2P62837 147 aa17.02■□□□□ 0.32
MCF2L-201ENST00000261963 CFHR3Q02985 330 aa17.02■□□□□ 0.32
MCF2L-201ENST00000261963 J3KRW8 73 aa17.01■□□□□ 0.31
MCF2L-201ENST00000261963 SRSF9Q13242 221 aaKnown RBP eCLIP17.01■□□□□ 0.31
MCF2L-201ENST00000261963 B4DSR2 109 aa17.01■□□□□ 0.31
MCF2L-201ENST00000261963 H3BVH4 76 aa17.01■□□□□ 0.31
MCF2L-201ENST00000261963 SCGB1D4Q6XE38 83 aa17.01■□□□□ 0.31
MCF2L-201ENST00000261963 SCGB3A1Q96QR1 104 aa17.01■□□□□ 0.31
MCF2L-201ENST00000261963 PRSS29PA6NIE9 313 aa17■□□□□ 0.31
MCF2L-201ENST00000261963 ZNF815PA8K554 130 aa17■□□□□ 0.31
MCF2L-201ENST00000261963 OVOL1O14753 267 aa17■□□□□ 0.31
MCF2L-201ENST00000261963 CSMD2Q7Z408 3487 aa17■□□□□ 0.31
MCF2L-201ENST00000261963 OR10J6PQ8NGY7 276 aa17■□□□□ 0.31
MCF2L-201ENST00000261963 PRADC1Q9BSG0 188 aa17■□□□□ 0.31
MCF2L-201ENST00000261963 ZNF688P0C7X2 276 aa16.99■□□□□ 0.31
MCF2L-201ENST00000261963 SPANXN1Q5VSR9 72 aa16.99■□□□□ 0.31
MCF2L-201ENST00000261963 NEXN-AS1Q8NBZ9 246 aa16.99■□□□□ 0.31
MCF2L-201ENST00000261963 SS18L2Q9UHA2 77 aa16.99■□□□□ 0.31
MCF2L-201ENST00000261963 RHPN1-AS1Q9BWJ2 59 aa16.99■□□□□ 0.31
MCF2L-201ENST00000261963 USP9YO00507 2555 aaPredicted RBP16.98■□□□□ 0.31
MCF2L-201ENST00000261963 TMEM95Q3KNT9 176 aa16.98■□□□□ 0.31
MCF2L-201ENST00000261963 ZFAND6Q6FIF0 208 aa16.98■□□□□ 0.31
MCF2L-201ENST00000261963 FAM19A4Q96LR4 140 aa16.98■□□□□ 0.31
MCF2L-201ENST00000261963 SMIM2Q9BVW6 85 aa16.98■□□□□ 0.31
MCF2L-201ENST00000261963 F6UB75 175 aa16.98■□□□□ 0.31
MCF2L-201ENST00000261963 RPL11P62913 178 aaKnown RBP16.98■□□□□ 0.31
MCF2L-201ENST00000261963 GAGE5Q13069 117 aa16.98■□□□□ 0.31
MCF2L-201ENST00000261963 GAGE6Q13070 117 aa16.98■□□□□ 0.31
MCF2L-201ENST00000261963 ORMDL2Q53FV1 153 aa16.98■□□□□ 0.31
MCF2L-201ENST00000261963 A8MWV9 139 aa16.97■□□□□ 0.31
MCF2L-201ENST00000261963 TOMM6Q96B49 74 aa16.97■□□□□ 0.31
MCF2L-201ENST00000261963 IGKV3-7A0A075B6H7 116 aa16.97■□□□□ 0.31
MCF2L-201ENST00000261963 EDN2P20800 178 aa16.97■□□□□ 0.31
MCF2L-201ENST00000261963 TEX29Q8N6K0 151 aa16.97■□□□□ 0.31
MCF2L-201ENST00000261963 PLEKHB2Q96CS7 222 aa16.97■□□□□ 0.31
MCF2L-201ENST00000261963 TRBV20-1A0A075B6N2 111 aa16.96■□□□□ 0.31
MCF2L-201ENST00000261963 TRAV21A0A0B4J279 112 aa16.96■□□□□ 0.31
MCF2L-201ENST00000261963 DAZ1Q9NQZ3 744 aaKnown RBP16.96■□□□□ 0.31
MCF2L-201ENST00000261963 TMEM262E9PQX1 116 aa16.96■□□□□ 0.3
MCF2L-201ENST00000261963 TCL1BO95988 128 aa16.96■□□□□ 0.3
MCF2L-201ENST00000261963 SLC25A16P16260 332 aa16.96■□□□□ 0.3
MCF2L-201ENST00000261963 SBSPONQ8IVN8 264 aa16.96■□□□□ 0.3
MCF2L-201ENST00000261963 ZFYVE26Q68DK2 2539 aa16.95■□□□□ 0.3
MCF2L-201ENST00000261963 SPRY2O43597 315 aa16.95■□□□□ 0.3
MCF2L-201ENST00000261963 CD7P09564 240 aa16.95■□□□□ 0.3
MCF2L-201ENST00000261963 NDUFA11Q86Y39 141 aa16.94■□□□□ 0.3
MCF2L-201ENST00000261963 IGHV4-59P01825 116 aa16.94■□□□□ 0.3
MCF2L-201ENST00000261963 APRG1Q8IVJ8 170 aa16.94■□□□□ 0.3
MCF2L-201ENST00000261963 DEFB112Q30KQ8 113 aa16.93■□□□□ 0.3
MCF2L-201ENST00000261963 ANXA2RQ3ZCQ2 193 aa16.93■□□□□ 0.3
MCF2L-201ENST00000261963 ZANQ9Y493 2812 aa16.93■□□□□ 0.3
MCF2L-201ENST00000261963 POLQO75417 2590 aa16.93■□□□□ 0.3
MCF2L-201ENST00000261963 COX6B1P14854 86 aa16.92■□□□□ 0.3
MCF2L-201ENST00000261963 RNASE4P34096 147 aaKnown RBP16.92■□□□□ 0.3
MCF2L-201ENST00000261963 DSCR9P59020 149 aa16.92■□□□□ 0.3
MCF2L-201ENST00000261963 ANKRD29Q8N6D5 301 aa16.92■□□□□ 0.3
MCF2L-201ENST00000261963 BAALCQ8WXS3 180 aa16.92■□□□□ 0.3
MCF2L-201ENST00000261963 ZNF580Q9UK33 172 aa16.92■□□□□ 0.3
MCF2L-201ENST00000261963 FBN2P35556 2912 aa16.92■□□□□ 0.3
MCF2L-201ENST00000261963 SRD5A1P18405 259 aa16.92■□□□□ 0.3
MCF2L-201ENST00000261963 A0A096LNT2 108 aa16.91■□□□□ 0.3
MCF2L-201ENST00000261963 M0R381 172 aa16.91■□□□□ 0.3
MCF2L-201ENST00000261963 PSMB8P28062 276 aa16.91■□□□□ 0.3
MCF2L-201ENST00000261963 KIR2DL4Q99706 377 aa16.91■□□□□ 0.3
MCF2L-201ENST00000261963 ASIPP42127 132 aa16.9■□□□□ 0.3
MCF2L-201ENST00000261963 C10orf99Q6UWK7 81 aa16.9■□□□□ 0.3
MCF2L-201ENST00000261963 RASL10AQ92737 203 aa16.9■□□□□ 0.3
MCF2L-201ENST00000261963 K7EMT4 169 aa16.9■□□□□ 0.3
MCF2L-201ENST00000261963 SUMO2P61956 95 aaKnown RBP16.9■□□□□ 0.3
MCF2L-201ENST00000261963 CITED1Q99966 193 aa16.9■□□□□ 0.3
MCF2L-201ENST00000261963 B5MCH6 92 aa16.89■□□□□ 0.29
MCF2L-201ENST00000261963 S100A4P26447 101 aaKnown RBP16.89■□□□□ 0.29
MCF2L-201ENST00000261963 LINC01356Q8N9X3 169 aa16.89■□□□□ 0.29
MCF2L-201ENST00000261963 KLHL30-AS1Q8NEE0 82 aa16.89■□□□□ 0.29
MCF2L-201ENST00000261963 FAM208BQ5VWN6 2430 aa16.89■□□□□ 0.29
MCF2L-201ENST00000261963 TRBV7-9A0A0J9YWB2 115 aa16.89■□□□□ 0.29
MCF2L-201ENST00000261963 C2orf66Q6UXQ4 117 aa16.89■□□□□ 0.29
MCF2L-201ENST00000261963 LRRK2Q5S007 2527 aa16.89■□□□□ 0.29
MCF2L-201ENST00000261963 CENPEQ02224 2701 aa16.89■□□□□ 0.29
MCF2L-201ENST00000261963 GNRH2O43555 120 aa16.88■□□□□ 0.29
MCF2L-201ENST00000261963 SCGB1C2P0DMR2 95 aa16.88■□□□□ 0.29
MCF2L-201ENST00000261963 ZNF462Q96JM2 2506 aa16.88■□□□□ 0.29
MCF2L-201ENST00000261963 ANKRD17O75179 2603 aaKnown RBP16.88■□□□□ 0.29
MCF2L-201ENST00000261963 DCANP1Q8TF63 244 aa16.88■□□□□ 0.29
MCF2L-201ENST00000261963 USP24Q9UPU5 2620 aa16.87■□□□□ 0.29
MCF2L-201ENST00000261963 TGFAP01135 160 aa16.87■□□□□ 0.29
MCF2L-201ENST00000261963 RNASE3P12724 160 aaKnown RBP16.87■□□□□ 0.29
MCF2L-201ENST00000261963 PHLDA3Q9Y5J5 127 aa16.87■□□□□ 0.29
MCF2L-201ENST00000261963 MED14OSP0DP75 135 aa16.87■□□□□ 0.29
MCF2L-201ENST00000261963 A0A0J9YY99 117 aa16.86■□□□□ 0.29
MCF2L-201ENST00000261963 CFC1BP0CG36 223 aa16.86■□□□□ 0.29
MCF2L-201ENST00000261963 CFC1P0CG37 223 aa16.86■□□□□ 0.29
MCF2L-201ENST00000261963 C10orf126Q8N4M7 172 aa16.86■□□□□ 0.29
MCF2L-201ENST00000261963 C14orf178Q8N769 122 aaPredicted RBP16.86■□□□□ 0.29
MCF2L-201ENST00000261963 NHLRC4P0CG21 123 aaPredicted RBP16.86■□□□□ 0.29
MCF2L-201ENST00000261963 MAPK1IP1LQ8NDC0 245 aa16.86■□□□□ 0.29
MCF2L-201ENST00000261963 DPH3P1Q9H4G8 78 aa16.86■□□□□ 0.29
MCF2L-201ENST00000261963 KLLNB2CW77 178 aa16.85■□□□□ 0.29
MCF2L-201ENST00000261963 RHODO00212 210 aa16.85■□□□□ 0.29
MCF2L-201ENST00000261963 HERVK_113P61574 105 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms