RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 E9PLD3 99 aa12.21□□□□□ -0.45
TM9SF1-201ENST00000261789 ZNF479Q96JC4 524 aa12.21□□□□□ -0.45
TM9SF1-201ENST00000261789 MDFICQ9P1T7 246 aa12.21□□□□□ -0.45
TM9SF1-201ENST00000261789 NDUFS8O00217 210 aa12.2□□□□□ -0.46
TM9SF1-201ENST00000261789 PLEKHB2Q96CS7 222 aa12.2□□□□□ -0.46
TM9SF1-201ENST00000261789 H3BMG7 143 aa12.2□□□□□ -0.46
TM9SF1-201ENST00000261789 NXPH4O95158 308 aa12.2□□□□□ -0.46
TM9SF1-201ENST00000261789 DUX5Q96PT3 197 aa12.2□□□□□ -0.46
TM9SF1-201ENST00000261789 TEX48A0A1B0GUV7 120 aa12.19□□□□□ -0.46
TM9SF1-201ENST00000261789 ZNF815PA8K554 130 aa12.19□□□□□ -0.46
TM9SF1-201ENST00000261789 PSMB8P28062 276 aa12.19□□□□□ -0.46
TM9SF1-201ENST00000261789 ID1P41134 155 aa12.19□□□□□ -0.46
TM9SF1-201ENST00000261789 DEFB112Q30KQ8 113 aa12.19□□□□□ -0.46
TM9SF1-201ENST00000261789 ZFP2Q6ZN57 461 aa12.19□□□□□ -0.46
TM9SF1-201ENST00000261789 C11orf86A6NJI1 115 aa12.19□□□□□ -0.46
TM9SF1-201ENST00000261789 SCGB2A2Q13296 93 aa12.19□□□□□ -0.46
TM9SF1-201ENST00000261789 TAL2Q16559 108 aa12.19□□□□□ -0.46
TM9SF1-201ENST00000261789 TRBV7-9A0A0J9YWB2 115 aa12.18□□□□□ -0.46
TM9SF1-201ENST00000261789 POLR2KP53803 58 aaKnown RBP12.18□□□□□ -0.46
TM9SF1-201ENST00000261789 WFDC2Q14508 124 aa12.18□□□□□ -0.46
TM9SF1-201ENST00000261789 FOXI2Q6ZQN5 318 aa12.18□□□□□ -0.46
TM9SF1-201ENST00000261789 POM121L12Q8N7R1 296 aa12.18□□□□□ -0.46
TM9SF1-201ENST00000261789 ANKRD17O75179 2603 aaKnown RBP12.18□□□□□ -0.46
TM9SF1-201ENST00000261789 ZNF256Q9Y2P7 627 aaPredicted RBP12.18□□□□□ -0.46
TM9SF1-201ENST00000261789 IGLV4-69A0A075B6H9 119 aa12.17□□□□□ -0.46
TM9SF1-201ENST00000261789 IGHV4OR15-8A0A075B7B6 117 aa12.17□□□□□ -0.46
TM9SF1-201ENST00000261789 A0A087WW49 117 aa12.17□□□□□ -0.46
TM9SF1-201ENST00000261789 SDHAF1A6NFY7 115 aa12.17□□□□□ -0.46
TM9SF1-201ENST00000261789 B4DSR2 109 aa12.17□□□□□ -0.46
TM9SF1-201ENST00000261789 K7EMT4 169 aa12.17□□□□□ -0.46
TM9SF1-201ENST00000261789 SCGB1D4Q6XE38 83 aa12.17□□□□□ -0.46
TM9SF1-201ENST00000261789 IGIPA6NJ69 53 aa12.17□□□□□ -0.46
TM9SF1-201ENST00000261789 PPP1R17O96001 155 aa12.17□□□□□ -0.46
TM9SF1-201ENST00000261789 SPINK13Q1W4C9 94 aa12.17□□□□□ -0.46
TM9SF1-201ENST00000261789 SYNJ2BPP57105 145 aa12.16□□□□□ -0.46
TM9SF1-201ENST00000261789 SFTA2Q6UW10 78 aa12.16□□□□□ -0.46
TM9SF1-201ENST00000261789 Q8N1Y9 231 aa12.16□□□□□ -0.46
TM9SF1-201ENST00000261789 OPRPNQ99935 248 aaPredicted RBP12.16□□□□□ -0.46
TM9SF1-201ENST00000261789 FAM208BQ5VWN6 2430 aa12.15□□□□□ -0.46
TM9SF1-201ENST00000261789 IGHV3-16A0A0C4DH30 117 aa12.15□□□□□ -0.46
TM9SF1-201ENST00000261789 COX6B1P14854 86 aa12.15□□□□□ -0.46
TM9SF1-201ENST00000261789 KIR2DL4Q99706 377 aa12.15□□□□□ -0.46
TM9SF1-201ENST00000261789 ZNF56Q15929 161 aa12.15□□□□□ -0.46
TM9SF1-201ENST00000261789 RRN3P1Q2M238 152 aa12.15□□□□□ -0.46
TM9SF1-201ENST00000261789 ZFYVE26Q68DK2 2539 aa12.14□□□□□ -0.47
TM9SF1-201ENST00000261789 A0A0J9YX75 114 aa12.14□□□□□ -0.47
TM9SF1-201ENST00000261789 VCYO14598 125 aa12.14□□□□□ -0.47
TM9SF1-201ENST00000261789 MORN3Q6PF18 240 aaPredicted RBP12.14□□□□□ -0.47
TM9SF1-201ENST00000261789 SH2D6Q7Z4S9 175 aa12.14□□□□□ -0.47
TM9SF1-201ENST00000261789 SRSF9Q13242 221 aaKnown RBP eCLIP12.14□□□□□ -0.47
TM9SF1-201ENST00000261789 PMVKQ15126 192 aa12.13□□□□□ -0.47
TM9SF1-201ENST00000261789 ZNRF2Q8NHG8 242 aa12.13□□□□□ -0.47
TM9SF1-201ENST00000261789 ZNF469Q96JG9 3925 aaPredicted RBP12.13□□□□□ -0.47
TM9SF1-201ENST00000261789 TEX15Q9BXT5 2789 aa12.13□□□□□ -0.47
TM9SF1-201ENST00000261789 HOXA3O43365 443 aaPredicted RBP12.13□□□□□ -0.47
TM9SF1-201ENST00000261789 HTN1P15515 57 aa12.13□□□□□ -0.47
TM9SF1-201ENST00000261789 TSPEAR-AS2P59090 65 aa12.13□□□□□ -0.47
TM9SF1-201ENST00000261789 TMEM170BQ5T4T1 132 aa12.13□□□□□ -0.47
TM9SF1-201ENST00000261789 PGPEP1Q9NXJ5 209 aa12.13□□□□□ -0.47
TM9SF1-201ENST00000261789 SNRPD3P62318 126 aaKnown RBP12.12□□□□□ -0.47
TM9SF1-201ENST00000261789 C9orf85Q96MD7 179 aa12.12□□□□□ -0.47
TM9SF1-201ENST00000261789 A0A1B0GWB2 263 aa12.12□□□□□ -0.47
TM9SF1-201ENST00000261789 ETDBQ3ZM63 59 aa12.12□□□□□ -0.47
TM9SF1-201ENST00000261789 TRBV27A0A0K0K1C4 114 aa12.11□□□□□ -0.47
TM9SF1-201ENST00000261789 K7EQG2 157 aa12.11□□□□□ -0.47
TM9SF1-201ENST00000261789 M0QY20 66 aa12.11□□□□□ -0.47
TM9SF1-201ENST00000261789 LGALS9O00182 355 aa12.11□□□□□ -0.47
TM9SF1-201ENST00000261789 PRM2P04554 102 aa12.11□□□□□ -0.47
TM9SF1-201ENST00000261789 LINC01549A6NIU2 74 aa12.11□□□□□ -0.47
TM9SF1-201ENST00000261789 LINC01619G3V211 115 aa12.11□□□□□ -0.47
TM9SF1-201ENST00000261789 TGFAP01135 160 aa12.11□□□□□ -0.47
TM9SF1-201ENST00000261789 BBC3Q96PG8 261 aaPredicted RBP12.11□□□□□ -0.47
TM9SF1-201ENST00000261789 MRPL16Q9NX20 251 aaKnown RBP12.11□□□□□ -0.47
TM9SF1-201ENST00000261789 APOMO95445 188 aa12.1□□□□□ -0.47
TM9SF1-201ENST00000261789 RPL32P62910 135 aaKnown RBP12.1□□□□□ -0.47
TM9SF1-201ENST00000261789 SPANXB1Q9NS25 103 aaPredicted RBP12.1□□□□□ -0.47
TM9SF1-201ENST00000261789 LRRK2Q5S007 2527 aa12.1□□□□□ -0.47
TM9SF1-201ENST00000261789 IGHV1OR15-1A0A075B7D0 117 aa12.1□□□□□ -0.47
TM9SF1-201ENST00000261789 F8W1H4 67 aa12.1□□□□□ -0.47
TM9SF1-201ENST00000261789 ZNF876PQ49A33 203 aa12.1□□□□□ -0.47
TM9SF1-201ENST00000261789 IGHV3-73A0A0B4J1V6 119 aa12.09□□□□□ -0.47
TM9SF1-201ENST00000261789 A0A0J9YY99 117 aa12.09□□□□□ -0.47
TM9SF1-201ENST00000261789 TMEM238C9JI98 176 aa12.09□□□□□ -0.47
TM9SF1-201ENST00000261789 HIST2H2BDQ6DRA6 164 aa12.09□□□□□ -0.47
TM9SF1-201ENST00000261789 ABCA12Q86UK0 2595 aa12.09□□□□□ -0.47
TM9SF1-201ENST00000261789 ZNF580Q9UK33 172 aa12.09□□□□□ -0.47
TM9SF1-201ENST00000261789 PRB1P04280 392 aa12.08□□□□□ -0.48
TM9SF1-201ENST00000261789 P0DMU3 169 aa12.08□□□□□ -0.48
TM9SF1-201ENST00000261789 FAM231AP0DMU4 169 aa12.08□□□□□ -0.48
TM9SF1-201ENST00000261789 FAM231CP0DMU5 169 aa12.08□□□□□ -0.48
TM9SF1-201ENST00000261789 HOXD3P31249 432 aaPredicted RBP12.08□□□□□ -0.48
TM9SF1-201ENST00000261789 DEFB136Q30KP8 78 aa12.08□□□□□ -0.48
TM9SF1-201ENST00000261789 GAGE13Q4V321 117 aa12.08□□□□□ -0.48
TM9SF1-201ENST00000261789 C18orf65Q6ZTR6 163 aa12.08□□□□□ -0.48
TM9SF1-201ENST00000261789 TMEM141Q96I45 108 aa12.08□□□□□ -0.48
TM9SF1-201ENST00000261789 TIMM17AQ99595 171 aa12.08□□□□□ -0.48
TM9SF1-201ENST00000261789 MYO9AB2RTY4 2548 aa12.08□□□□□ -0.48
TM9SF1-201ENST00000261789 IGHV3-64A0A075B6Q5 118 aa12.08□□□□□ -0.48
TM9SF1-201ENST00000261789 RBMY1A1P0DJD3 496 aaKnown RBP12.08□□□□□ -0.48
TM9SF1-201ENST00000261789 RBMY1CP0DJD4 496 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms