RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 C19orf84I3L1E1 186 aa12.22□□□□□ -0.45
SNCAIP-202ENST00000261368 PPP1R17O96001 155 aa12.22□□□□□ -0.45
SNCAIP-202ENST00000261368 AJUBAQ96IF1 538 aa12.22□□□□□ -0.45
SNCAIP-202ENST00000261368 PSMG3-AS1Q96PY0 264 aa12.22□□□□□ -0.45
SNCAIP-202ENST00000261368 PHLDA1Q8WV24 401 aaPredicted RBP12.22□□□□□ -0.45
SNCAIP-202ENST00000261368 OPRPNQ99935 248 aaPredicted RBP12.22□□□□□ -0.45
SNCAIP-202ENST00000261368 SPAG8Q99932 426 aaPredicted RBP12.22□□□□□ -0.45
SNCAIP-202ENST00000261368 TRAV12-1A0A0B4J245 112 aa12.21□□□□□ -0.45
SNCAIP-202ENST00000261368 NDUFS8O00217 210 aa12.21□□□□□ -0.45
SNCAIP-202ENST00000261368 RAX2Q96IS3 184 aa12.21□□□□□ -0.45
SNCAIP-202ENST00000261368 CCL19Q99731 98 aa12.21□□□□□ -0.45
SNCAIP-202ENST00000261368 LENEPQ9Y5L5 61 aa12.21□□□□□ -0.45
SNCAIP-202ENST00000261368 SPINK13Q1W4C9 94 aa12.21□□□□□ -0.45
SNCAIP-202ENST00000261368 KHDC1LQ5JSQ8 128 aa12.21□□□□□ -0.45
SNCAIP-202ENST00000261368 SUMO4Q6EEV6 95 aa12.21□□□□□ -0.45
SNCAIP-202ENST00000261368 PTH2Q96A98 100 aa12.21□□□□□ -0.45
SNCAIP-202ENST00000261368 SPANXB1Q9NS25 103 aaPredicted RBP12.21□□□□□ -0.45
SNCAIP-202ENST00000261368 PRSS2P07478 247 aa12.21□□□□□ -0.46
SNCAIP-202ENST00000261368 U3KQE9 123 aa12.21□□□□□ -0.46
SNCAIP-202ENST00000261368 TRAV2A0A0B4J234 112 aa12.2□□□□□ -0.46
SNCAIP-202ENST00000261368 VCYO14598 125 aa12.2□□□□□ -0.46
SNCAIP-202ENST00000261368 DLX4Q92988 240 aaPredicted RBP12.2□□□□□ -0.46
SNCAIP-202ENST00000261368 SONP18583 2426 aaKnown RBP12.2□□□□□ -0.46
SNCAIP-202ENST00000261368 RNASE3P12724 160 aaKnown RBP12.2□□□□□ -0.46
SNCAIP-202ENST00000261368 ITLN2Q8WWU7 325 aaPredicted RBP12.2□□□□□ -0.46
SNCAIP-202ENST00000261368 ZFP2Q6ZN57 461 aa12.2□□□□□ -0.46
SNCAIP-202ENST00000261368 GPHB5Q86YW7 130 aa12.2□□□□□ -0.46
SNCAIP-202ENST00000261368 USMG5Q96IX5 58 aa12.2□□□□□ -0.46
SNCAIP-202ENST00000261368 PMVKQ15126 192 aa12.19□□□□□ -0.46
SNCAIP-202ENST00000261368 TRBV7-3A0A075B6L6 115 aa12.19□□□□□ -0.46
SNCAIP-202ENST00000261368 IGHV4-4A0A075B6R2 117 aa12.18□□□□□ -0.46
SNCAIP-202ENST00000261368 LINC01546A6NGU7 62 aa12.18□□□□□ -0.46
SNCAIP-202ENST00000261368 MAPK1IP1LQ8NDC0 245 aa12.18□□□□□ -0.46
SNCAIP-202ENST00000261368 SNRPD3P62318 126 aaKnown RBP12.18□□□□□ -0.46
SNCAIP-202ENST00000261368 SYT8Q8NBV8 401 aa12.18□□□□□ -0.46
SNCAIP-202ENST00000261368 MDFICQ9P1T7 246 aa12.17□□□□□ -0.46
SNCAIP-202ENST00000261368 ZFYVE26Q68DK2 2539 aa12.17□□□□□ -0.46
SNCAIP-202ENST00000261368 LYRM7Q5U5X0 104 aa12.17□□□□□ -0.46
SNCAIP-202ENST00000261368 ADARB2-AS1A8MUL3 147 aa12.16□□□□□ -0.46
SNCAIP-202ENST00000261368 CIDEAO60543 219 aa12.16□□□□□ -0.46
SNCAIP-202ENST00000261368 C10orf99Q6UWK7 81 aa12.16□□□□□ -0.46
SNCAIP-202ENST00000261368 KNCNA6PVL3 124 aa12.16□□□□□ -0.46
SNCAIP-202ENST00000261368 SYNJ2BPP57105 145 aa12.16□□□□□ -0.46
SNCAIP-202ENST00000261368 ZNF876PQ49A33 203 aa12.16□□□□□ -0.46
SNCAIP-202ENST00000261368 RNASE13Q5GAN3 156 aaKnown RBP12.16□□□□□ -0.46
SNCAIP-202ENST00000261368 PAPPA-AS1Q5QFB9 102 aa12.15□□□□□ -0.46
SNCAIP-202ENST00000261368 MUC4Q99102 2169 aa12.15□□□□□ -0.46
SNCAIP-202ENST00000261368 NPC2P61916 151 aa12.15□□□□□ -0.46
SNCAIP-202ENST00000261368 Q5PR19 223 aa12.14□□□□□ -0.47
SNCAIP-202ENST00000261368 VCX2Q9H322 139 aa12.14□□□□□ -0.47
SNCAIP-202ENST00000261368 CCDC168Q8NDH2 2452 aa12.14□□□□□ -0.47
SNCAIP-202ENST00000261368 IGHV4-30-2A0A087WSY4 118 aa12.14□□□□□ -0.47
SNCAIP-202ENST00000261368 J3QQQ9 107 aa12.14□□□□□ -0.47
SNCAIP-202ENST00000261368 MORN3Q6PF18 240 aaPredicted RBP12.14□□□□□ -0.47
SNCAIP-202ENST00000261368 ABCA2Q9BZC7 2435 aa12.14□□□□□ -0.47
SNCAIP-202ENST00000261368 TSPAN13O95857 204 aa12.13□□□□□ -0.47
SNCAIP-202ENST00000261368 NRGNQ92686 78 aa12.13□□□□□ -0.47
SNCAIP-202ENST00000261368 SPXQ9BT56 116 aa12.13□□□□□ -0.47
SNCAIP-202ENST00000261368 IGHG2P01859 326 aa12.13□□□□□ -0.47
SNCAIP-202ENST00000261368 PIEZO1Q92508 2521 aa12.12□□□□□ -0.47
SNCAIP-202ENST00000261368 PRSS47A8MTI9 375 aa12.12□□□□□ -0.47
SNCAIP-202ENST00000261368 Q8N1Y9 231 aa12.12□□□□□ -0.47
SNCAIP-202ENST00000261368 LRRK2Q5S007 2527 aa12.12□□□□□ -0.47
SNCAIP-202ENST00000261368 PKD1L2Q7Z442 2459 aa12.12□□□□□ -0.47
SNCAIP-202ENST00000261368 NAV2Q8IVL1 2488 aa12.12□□□□□ -0.47
SNCAIP-202ENST00000261368 IGHV4-59P01825 116 aa12.11□□□□□ -0.47
SNCAIP-202ENST00000261368 MSMBP08118 114 aa12.11□□□□□ -0.47
SNCAIP-202ENST00000261368 A0A1B0GV72 72 aa12.11□□□□□ -0.47
SNCAIP-202ENST00000261368 A8MWV9 139 aa12.11□□□□□ -0.47
SNCAIP-202ENST00000261368 SOCS3O14543 225 aa12.11□□□□□ -0.47
SNCAIP-202ENST00000261368 ABCA12Q86UK0 2595 aa12.11□□□□□ -0.47
SNCAIP-202ENST00000261368 A0A0J9YXV3 536 aa12.1□□□□□ -0.47
SNCAIP-202ENST00000261368 CD28P10747 220 aa12.1□□□□□ -0.47
SNCAIP-202ENST00000261368 A0A0J9YY99 117 aa12.1□□□□□ -0.47
SNCAIP-202ENST00000261368 C9JAW5 83 aa12.1□□□□□ -0.47
SNCAIP-202ENST00000261368 CRYGDP07320 174 aa12.1□□□□□ -0.47
SNCAIP-202ENST00000261368 TSPEAR-AS2P59090 65 aa12.09□□□□□ -0.47
SNCAIP-202ENST00000261368 TMEM141Q96I45 108 aa12.09□□□□□ -0.47
SNCAIP-202ENST00000261368 TSHBP01222 138 aa12.09□□□□□ -0.47
SNCAIP-202ENST00000261368 SPINK8P0C7L1 97 aa12.09□□□□□ -0.47
SNCAIP-202ENST00000261368 CKS1BP61024 79 aa12.09□□□□□ -0.47
SNCAIP-202ENST00000261368 FOXI1Q12951 378 aa12.09□□□□□ -0.47
SNCAIP-202ENST00000261368 IGHV3OR16-12A0A075B7B8 117 aa12.09□□□□□ -0.47
SNCAIP-202ENST00000261368 IGHV1OR15-1A0A075B7D0 117 aa12.09□□□□□ -0.47
SNCAIP-202ENST00000261368 PRM2P04554 102 aa12.09□□□□□ -0.47
SNCAIP-202ENST00000261368 NDUFA11Q86Y39 141 aa12.09□□□□□ -0.47
SNCAIP-202ENST00000261368 ZNRF2Q8NHG8 242 aa12.09□□□□□ -0.47
SNCAIP-202ENST00000261368 A4D1N5 150 aa12.08□□□□□ -0.48
SNCAIP-202ENST00000261368 P0DMU3 169 aa12.08□□□□□ -0.48
SNCAIP-202ENST00000261368 FAM231AP0DMU4 169 aa12.08□□□□□ -0.48
SNCAIP-202ENST00000261368 FAM231CP0DMU5 169 aa12.08□□□□□ -0.48
SNCAIP-202ENST00000261368 CEMP1Q6PRD7 247 aaPredicted RBP12.08□□□□□ -0.48
SNCAIP-202ENST00000261368 PRO1854Q9UHT4 67 aa12.08□□□□□ -0.48
SNCAIP-202ENST00000261368 C1QTNF4Q9BXJ3 329 aa12.08□□□□□ -0.48
SNCAIP-202ENST00000261368 IGLV4-69A0A075B6H9 119 aa12.08□□□□□ -0.48
SNCAIP-202ENST00000261368 A6NDX4 124 aa12.08□□□□□ -0.48
SNCAIP-202ENST00000261368 TCL1BO95988 128 aa12.08□□□□□ -0.48
SNCAIP-202ENST00000261368 ERG28Q9UKR5 140 aa12.08□□□□□ -0.48
SNCAIP-202ENST00000261368 TNFRSF18Q9Y5U5 241 aa12.08□□□□□ -0.48
SNCAIP-202ENST00000261368 DUX3Q96PT4 197 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 171.8 ms