RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 RASL10AQ92737 203 aa14.71□□□□□ -0.05
RTCA-201ENST00000260563 AP1S3Q96PC3 154 aa14.71□□□□□ -0.05
RTCA-201ENST00000260563 NDUFAF3Q9BU61 184 aa14.71□□□□□ -0.05
RTCA-201ENST00000260563 TMEM191AQ9H0A3 160 aa14.71□□□□□ -0.05
RTCA-201ENST00000260563 HLA-DQA1P01909 254 aa14.71□□□□□ -0.06
RTCA-201ENST00000260563 DEFB130BP0DP73 79 aa14.71□□□□□ -0.06
RTCA-201ENST00000260563 DEFB130AP0DP74 79 aa14.71□□□□□ -0.06
RTCA-201ENST00000260563 EVI2AP22794 236 aa14.71□□□□□ -0.06
RTCA-201ENST00000260563 C12orf74Q32Q52 190 aa14.71□□□□□ -0.06
RTCA-201ENST00000260563 MT-ND6P03923 174 aa14.7□□□□□ -0.06
RTCA-201ENST00000260563 Q6ZTC4 211 aa14.7□□□□□ -0.06
RTCA-201ENST00000260563 Q6ZTI0 123 aa14.7□□□□□ -0.06
RTCA-201ENST00000260563 TRAPPC1Q9Y5R8 145 aa14.7□□□□□ -0.06
RTCA-201ENST00000260563 GAGE12BA1L429 117 aa14.69□□□□□ -0.06
RTCA-201ENST00000260563 GAGE7O76087 117 aa14.69□□□□□ -0.06
RTCA-201ENST00000260563 GAGE12FP0CL80 117 aa14.69□□□□□ -0.06
RTCA-201ENST00000260563 GAGE12GP0CL81 117 aa14.69□□□□□ -0.06
RTCA-201ENST00000260563 GAGE12IP0CL82 117 aa14.69□□□□□ -0.06
RTCA-201ENST00000260563 C14orf178Q8N769 122 aaPredicted RBP14.69□□□□□ -0.06
RTCA-201ENST00000260563 MUC7Q8TAX7 377 aa14.69□□□□□ -0.06
RTCA-201ENST00000260563 JPT2Q9H910 190 aa14.69□□□□□ -0.06
RTCA-201ENST00000260563 A8MWV9 139 aa14.68□□□□□ -0.06
RTCA-201ENST00000260563 LINC00612Q8N6U2 182 aa14.68□□□□□ -0.06
RTCA-201ENST00000260563 FRZBQ92765 325 aa14.68□□□□□ -0.06
RTCA-201ENST00000260563 SMIM17P0DL12 118 aa14.67□□□□□ -0.06
RTCA-201ENST00000260563 MRPL18Q9H0U6 180 aaKnown RBP14.67□□□□□ -0.06
RTCA-201ENST00000260563 DPH3P1Q9H4G8 78 aa14.67□□□□□ -0.06
RTCA-201ENST00000260563 FABP9Q0Z7S8 132 aa14.66□□□□□ -0.06
RTCA-201ENST00000260563 FAM104BQ5XKR9 115 aa14.66□□□□□ -0.06
RTCA-201ENST00000260563 AMN1Q8IY45 258 aa14.66□□□□□ -0.06
RTCA-201ENST00000260563 CSMD3Q7Z407 3707 aa14.66□□□□□ -0.06
RTCA-201ENST00000260563 TRGV2A0A075B6R0 118 aa14.66□□□□□ -0.06
RTCA-201ENST00000260563 A0A087WWL8 130 aa14.66□□□□□ -0.06
RTCA-201ENST00000260563 APCSP02743 223 aa14.66□□□□□ -0.06
RTCA-201ENST00000260563 TRGC2P03986 189 aa14.66□□□□□ -0.06
RTCA-201ENST00000260563 SLAQ13239 276 aa14.66□□□□□ -0.06
RTCA-201ENST00000260563 SAMD10Q9BYL1 202 aa14.66□□□□□ -0.06
RTCA-201ENST00000260563 KIF25-AS1Q9Y6Z4 181 aa14.66□□□□□ -0.06
RTCA-201ENST00000260563 RS1O15537 224 aa14.65□□□□□ -0.06
RTCA-201ENST00000260563 CRYGDP07320 174 aa14.65□□□□□ -0.06
RTCA-201ENST00000260563 FAM74A4Q5TZK3 123 aa14.65□□□□□ -0.06
RTCA-201ENST00000260563 CFAP126Q5VTH2 177 aa14.65□□□□□ -0.06
RTCA-201ENST00000260563 PHLDA1Q8WV24 401 aaPredicted RBP14.65□□□□□ -0.06
RTCA-201ENST00000260563 TRAV10A0A0B4J240 114 aa14.64□□□□□ -0.07
RTCA-201ENST00000260563 RAB4AP20338 218 aa14.64□□□□□ -0.07
RTCA-201ENST00000260563 RNF185Q96GF1 192 aa14.64□□□□□ -0.07
RTCA-201ENST00000260563 STARD9Q9P2P6 4700 aa14.64□□□□□ -0.07
RTCA-201ENST00000260563 ATP5G1P05496 136 aa14.63□□□□□ -0.07
RTCA-201ENST00000260563 MGPP08493 103 aa14.63□□□□□ -0.07
RTCA-201ENST00000260563 C18orf15Q96N68 181 aa14.63□□□□□ -0.07
RTCA-201ENST00000260563 NACAE9PAV3 2078 aa14.63□□□□□ -0.07
RTCA-201ENST00000260563 DEFB131BA0A096LNP1 70 aa14.62□□□□□ -0.07
RTCA-201ENST00000260563 TRAV4A0A0B4J268 109 aa14.62□□□□□ -0.07
RTCA-201ENST00000260563 NUPR2A6NF83 97 aa14.62□□□□□ -0.07
RTCA-201ENST00000260563 HTN3P15516 51 aa14.62□□□□□ -0.07
RTCA-201ENST00000260563 LINC00315P59091 139 aa14.62□□□□□ -0.07
RTCA-201ENST00000260563 MRPL51Q4U2R6 128 aaKnown RBP14.62□□□□□ -0.07
RTCA-201ENST00000260563 ZFAND6Q6FIF0 208 aa14.62□□□□□ -0.07
RTCA-201ENST00000260563 POM121L12Q8N7R1 296 aa14.62□□□□□ -0.07
RTCA-201ENST00000260563 OR4C5Q8NGB2 326 aa14.62□□□□□ -0.07
RTCA-201ENST00000260563 KIAA1644Q3SXP7 199 aa14.61□□□□□ -0.07
RTCA-201ENST00000260563 UFSP1Q6NVU6 142 aa14.61□□□□□ -0.07
RTCA-201ENST00000260563 C3orf84H3BNL1 204 aa14.61□□□□□ -0.07
RTCA-201ENST00000260563 RHODO00212 210 aa14.61□□□□□ -0.07
RTCA-201ENST00000260563 IGHV3-73A0A0B4J1V6 119 aa14.6□□□□□ -0.07
RTCA-201ENST00000260563 PHOX2AO14813 284 aa14.6□□□□□ -0.07
RTCA-201ENST00000260563 ZNF56Q15929 161 aa14.6□□□□□ -0.07
RTCA-201ENST00000260563 ZFP2Q6ZN57 461 aa14.6□□□□□ -0.07
RTCA-201ENST00000260563 ZNF479Q96JC4 524 aa14.6□□□□□ -0.07
RTCA-201ENST00000260563 F5H697 171 aa14.59□□□□□ -0.07
RTCA-201ENST00000260563 IGHV3-53P01767 116 aa14.59□□□□□ -0.07
RTCA-201ENST00000260563 CEMP1Q6PRD7 247 aaPredicted RBP14.58□□□□□ -0.08
RTCA-201ENST00000260563 MRAP2Q96G30 205 aa14.58□□□□□ -0.08
RTCA-201ENST00000260563 DYNC2H1Q8NCM8 4307 aaKnown RBP14.58□□□□□ -0.08
RTCA-201ENST00000260563 TRAV26-2A0A0B4J265 109 aa14.57□□□□□ -0.08
RTCA-201ENST00000260563 C1orf196B1AJZ1 125 aa14.57□□□□□ -0.08
RTCA-201ENST00000260563 D6R8Y8 96 aa14.57□□□□□ -0.08
RTCA-201ENST00000260563 F5H768 121 aa14.57□□□□□ -0.08
RTCA-201ENST00000260563 CIDEAO60543 219 aa14.57□□□□□ -0.08
RTCA-201ENST00000260563 CKS2P33552 79 aa14.57□□□□□ -0.08
RTCA-201ENST00000260563 SUMO4Q6EEV6 95 aa14.57□□□□□ -0.08
RTCA-201ENST00000260563 KLK5Q9Y337 293 aaPredicted RBP14.57□□□□□ -0.08
RTCA-201ENST00000260563 SMKR1H3BMG3 65 aa14.56□□□□□ -0.08
RTCA-201ENST00000260563 ORMDL3Q8N138 153 aa14.56□□□□□ -0.08
RTCA-201ENST00000260563 NCR2O95944 276 aa14.56□□□□□ -0.08
RTCA-201ENST00000260563 PPBPP02775 128 aa14.56□□□□□ -0.08
RTCA-201ENST00000260563 CASC10Q5T4H9 136 aa14.56□□□□□ -0.08
RTCA-201ENST00000260563 HOXA5P20719 270 aa14.55□□□□□ -0.08
RTCA-201ENST00000260563 SRIP30626 198 aa14.55□□□□□ -0.08
RTCA-201ENST00000260563 ALKBH7Q9BT30 221 aaPredicted RBP14.55□□□□□ -0.08
RTCA-201ENST00000260563 GAS8-AS1O95177 125 aa14.54□□□□□ -0.08
RTCA-201ENST00000260563 TRGV4A0A0C4DH28 118 aa14.53□□□□□ -0.08
RTCA-201ENST00000260563 IGLL5B9A064 214 aa14.53□□□□□ -0.08
RTCA-201ENST00000260563 Q6ZSN1 163 aa14.53□□□□□ -0.08
RTCA-201ENST00000260563 PRELID3AQ96N28 172 aa14.53□□□□□ -0.08
RTCA-201ENST00000260563 PLECQ15149 4684 aaKnown RBP14.52□□□□□ -0.08
RTCA-201ENST00000260563 M0QY20 66 aa14.52□□□□□ -0.08
RTCA-201ENST00000260563 GATA1P15976 413 aaPredicted RBP14.52□□□□□ -0.08
RTCA-201ENST00000260563 FHL2Q14192 279 aa14.52□□□□□ -0.08
RTCA-201ENST00000260563 H7C1H1 209 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms