RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 PET117Q6UWS5 81 aa20.33■□□□□ 0.84
CCM2-201ENST00000258781 C20orf202A1L168 122 aa20.32■□□□□ 0.84
CCM2-201ENST00000258781 IGLV1-51P01701 117 aa20.32■□□□□ 0.84
CCM2-201ENST00000258781 MGPP08493 103 aa20.31■□□□□ 0.84
CCM2-201ENST00000258781 SMIM17P0DL12 118 aa20.31■□□□□ 0.84
CCM2-201ENST00000258781 SPATA12Q7Z6I5 190 aa20.31■□□□□ 0.84
CCM2-201ENST00000258781 STAB1Q9NY15 2570 aa20.31■□□□□ 0.84
CCM2-201ENST00000258781 PAM16Q9Y3D7 125 aa20.3■□□□□ 0.84
CCM2-201ENST00000258781 CBY3A6NI87 242 aa20.3■□□□□ 0.84
CCM2-201ENST00000258781 LINC00315P59091 139 aa20.3■□□□□ 0.84
CCM2-201ENST00000258781 PPP1R17O96001 155 aa20.29■□□□□ 0.84
CCM2-201ENST00000258781 RASL10AQ92737 203 aa20.29■□□□□ 0.84
CCM2-201ENST00000258781 C20orf78Q9BR46 151 aa20.29■□□□□ 0.84
CCM2-201ENST00000258781 LINC00467Q9BRT7 94 aa20.29■□□□□ 0.84
CCM2-201ENST00000258781 STHQ8IWL8 128 aa20.28■□□□□ 0.84
CCM2-201ENST00000258781 INSP01308 110 aa20.28■□□□□ 0.84
CCM2-201ENST00000258781 PF4P02776 101 aa20.28■□□□□ 0.84
CCM2-201ENST00000258781 FAM110AQ9BQ89 295 aa20.28■□□□□ 0.84
CCM2-201ENST00000258781 COL6A5A8TX70 2615 aa20.27■□□□□ 0.84
CCM2-201ENST00000258781 FCER1GP30273 86 aa20.27■□□□□ 0.84
CCM2-201ENST00000258781 TRPT1Q86TN4 253 aaKnown RBP20.26■□□□□ 0.83
CCM2-201ENST00000258781 LINC00482Q8N8I6 264 aa20.26■□□□□ 0.83
CCM2-201ENST00000258781 SMIM2Q9BVW6 85 aa20.26■□□□□ 0.83
CCM2-201ENST00000258781 JPT2Q9H910 190 aa20.26■□□□□ 0.83
CCM2-201ENST00000258781 SUMO2P61956 95 aaKnown RBP20.25■□□□□ 0.83
CCM2-201ENST00000258781 SPATA45Q537H7 98 aa20.24■□□□□ 0.83
CCM2-201ENST00000258781 LINC01545Q5VT33 79 aa20.24■□□□□ 0.83
CCM2-201ENST00000258781 ATOH7Q8N100 152 aa20.24■□□□□ 0.83
CCM2-201ENST00000258781 SPATA3Q8NHX4 192 aa20.24■□□□□ 0.83
CCM2-201ENST00000258781 TRAV9-2A0A087WT02 112 aa20.24■□□□□ 0.83
CCM2-201ENST00000258781 DEFA6Q01524 100 aa20.24■□□□□ 0.83
CCM2-201ENST00000258781 BEAN1Q3B7T3 259 aa20.24■□□□□ 0.83
CCM2-201ENST00000258781 NDUFAF3Q9BU61 184 aa20.24■□□□□ 0.83
CCM2-201ENST00000258781 LAGE3Q14657 143 aa20.23■□□□□ 0.83
CCM2-201ENST00000258781 RPL39LQ96EH5 51 aaKnown RBP20.23■□□□□ 0.83
CCM2-201ENST00000258781 ZNF876PQ49A33 203 aa20.22■□□□□ 0.83
CCM2-201ENST00000258781 A0A087WWL8 130 aa20.21■□□□□ 0.83
CCM2-201ENST00000258781 K7EMI3 77 aa20.21■□□□□ 0.83
CCM2-201ENST00000258781 ZNF415Q09FC8 603 aa20.21■□□□□ 0.83
CCM2-201ENST00000258781 SUMO4Q6EEV6 95 aa20.21■□□□□ 0.83
CCM2-201ENST00000258781 ZNF705AQ6ZN79 300 aaPredicted RBP20.21■□□□□ 0.83
CCM2-201ENST00000258781 IFI27L1Q96BM0 104 aa20.21■□□□□ 0.83
CCM2-201ENST00000258781 TMEM158Q8WZ71 300 aa20.2■□□□□ 0.82
CCM2-201ENST00000258781 LINC01587Q99440 93 aa20.2■□□□□ 0.82
CCM2-201ENST00000258781 NOTCH3Q9UM47 2321 aa20.2■□□□□ 0.82
CCM2-201ENST00000258781 RPL32P62910 135 aaKnown RBP20.2■□□□□ 0.82
CCM2-201ENST00000258781 PTH2Q96A98 100 aa20.2■□□□□ 0.82
CCM2-201ENST00000258781 MIEN1Q9BRT3 115 aa20.2■□□□□ 0.82
CCM2-201ENST00000258781 CRYGDP07320 174 aa20.19■□□□□ 0.82
CCM2-201ENST00000258781 HTN1P15515 57 aa20.19■□□□□ 0.82
CCM2-201ENST00000258781 NUTF2P61970 127 aaKnown RBP20.19■□□□□ 0.82
CCM2-201ENST00000258781 PIK3CD-AS1Q5SR53 167 aa20.19■□□□□ 0.82
CCM2-201ENST00000258781 H0Y8G0 127 aa20.18■□□□□ 0.82
CCM2-201ENST00000258781 C14orf144Q96I85 54 aa20.18■□□□□ 0.82
CCM2-201ENST00000258781 XCL2Q9UBD3 114 aa20.18■□□□□ 0.82
CCM2-201ENST00000258781 F5H697 171 aa20.17■□□□□ 0.82
CCM2-201ENST00000258781 TCAPO15273 167 aa20.17■□□□□ 0.82
CCM2-201ENST00000258781 C19orf73Q9NVV2 129 aa20.17■□□□□ 0.82
CCM2-201ENST00000258781 LGALS9BQ3B8N2 356 aa20.16■□□□□ 0.82
CCM2-201ENST00000258781 MAJINQ3KP22 176 aa20.16■□□□□ 0.82
CCM2-201ENST00000258781 ORMDL2Q53FV1 153 aa20.16■□□□□ 0.82
CCM2-201ENST00000258781 FAM74A4Q5TZK3 123 aa20.16■□□□□ 0.82
CCM2-201ENST00000258781 LGALS9CQ6DKI2 356 aa20.16■□□□□ 0.82
CCM2-201ENST00000258781 ST20Q9HBF5 79 aa20.16■□□□□ 0.82
CCM2-201ENST00000258781 M0R2P5 195 aa20.16■□□□□ 0.82
CCM2-201ENST00000258781 C3orf56Q8N813 242 aa20.15■□□□□ 0.82
CCM2-201ENST00000258781 C11orf72Q8NBR9 251 aa20.15■□□□□ 0.82
CCM2-201ENST00000258781 SPXQ9BT56 116 aa20.14■□□□□ 0.81
CCM2-201ENST00000258781 MCRIP2Q9BUT9 160 aaKnown RBP20.14■□□□□ 0.81
CCM2-201ENST00000258781 TRBV6-5A0A0K0K1A5 114 aa20.13■□□□□ 0.81
CCM2-201ENST00000258781 ZNF56Q15929 161 aa20.13■□□□□ 0.81
CCM2-201ENST00000258781 CSTL1Q9H114 145 aa20.13■□□□□ 0.81
CCM2-201ENST00000258781 CMYA5Q8N3K9 4069 aa20.13■□□□□ 0.81
CCM2-201ENST00000258781 IGLC3P0DOY3 106 aa20.13■□□□□ 0.81
CCM2-201ENST00000258781 C12orf54Q6X4T0 127 aa20.13■□□□□ 0.81
CCM2-201ENST00000258781 C1orf158Q8N1D5 194 aa20.13■□□□□ 0.81
CCM2-201ENST00000258781 ANK2Q01484 3957 aa20.13■□□□□ 0.81
CCM2-201ENST00000258781 ATP5LO75964 103 aa20.12■□□□□ 0.81
CCM2-201ENST00000258781 IGLL1P15814 213 aa20.12■□□□□ 0.81
CCM2-201ENST00000258781 C18orf15Q96N68 181 aa20.12■□□□□ 0.81
CCM2-201ENST00000258781 TMEM208Q9BTX3 173 aa20.12■□□□□ 0.81
CCM2-201ENST00000258781 NUDT3O95989 172 aa20.11■□□□□ 0.81
CCM2-201ENST00000258781 A8MWV9 139 aa20.11■□□□□ 0.81
CCM2-201ENST00000258781 M0QY20 66 aa20.11■□□□□ 0.81
CCM2-201ENST00000258781 PRM2P04554 102 aa20.11■□□□□ 0.81
CCM2-201ENST00000258781 POLR2KP53803 58 aaKnown RBP20.11■□□□□ 0.81
CCM2-201ENST00000258781 UQCR10Q9UDW1 63 aa20.11■□□□□ 0.81
CCM2-201ENST00000258781 HSBP1L1C9JCN9 74 aa20.1■□□□□ 0.81
CCM2-201ENST00000258781 PMCHL2Q9BQD1 86 aa20.1■□□□□ 0.81
CCM2-201ENST00000258781 INSL3P51460 131 aa20.09■□□□□ 0.81
CCM2-201ENST00000258781 EDA2RQ9HAV5 297 aa20.09■□□□□ 0.81
CCM2-201ENST00000258781 GOLT1BQ9Y3E0 138 aa20.09■□□□□ 0.81
CCM2-201ENST00000258781 VCYO14598 125 aa20.08■□□□□ 0.81
CCM2-201ENST00000258781 WFDC10AQ9H1F0 79 aa20.08■□□□□ 0.81
CCM2-201ENST00000258781 hDV102S1A0JD36 115 aa20.07■□□□□ 0.8
CCM2-201ENST00000258781 SHISA2Q6UWI4 295 aa20.07■□□□□ 0.8
CCM2-201ENST00000258781 MORN3Q6PF18 240 aaPredicted RBP20.07■□□□□ 0.8
CCM2-201ENST00000258781 TOMM6Q96B49 74 aa20.07■□□□□ 0.8
CCM2-201ENST00000258781 TRBV27A0A0K0K1C4 114 aa20.05■□□□□ 0.8
CCM2-201ENST00000258781 SDHAF1A6NFY7 115 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms