RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 GCSHP23434 173 aa12.27□□□□□ -0.45
UBQLN1-201ENST00000257468 TCTEX1D4Q5JR98 221 aa12.27□□□□□ -0.45
UBQLN1-201ENST00000257468 BAALCQ8WXS3 180 aa12.27□□□□□ -0.45
UBQLN1-201ENST00000257468 CHTOPQ9Y3Y2 248 aaKnown RBP12.27□□□□□ -0.45
UBQLN1-201ENST00000257468 H3BUT2 72 aa12.26□□□□□ -0.45
UBQLN1-201ENST00000257468 DUSP14O95147 198 aaKnown RBP12.26□□□□□ -0.45
UBQLN1-201ENST00000257468 PLNP26678 52 aa12.26□□□□□ -0.45
UBQLN1-201ENST00000257468 CDKN1BP46527 198 aa12.26□□□□□ -0.45
UBQLN1-201ENST00000257468 FXYD2P54710 66 aa12.26□□□□□ -0.45
UBQLN1-201ENST00000257468 CREBBPQ92793 2442 aa12.26□□□□□ -0.45
UBQLN1-201ENST00000257468 TRAV12-1A0A0B4J245 112 aa12.26□□□□□ -0.45
UBQLN1-201ENST00000257468 H3BRM9 83 aa12.26□□□□□ -0.45
UBQLN1-201ENST00000257468 C9orf85Q96MD7 179 aa12.26□□□□□ -0.45
UBQLN1-201ENST00000257468 APCP25054 2843 aa12.26□□□□□ -0.45
UBQLN1-201ENST00000257468 ODF3Q96PU9 254 aa12.25□□□□□ -0.45
UBQLN1-201ENST00000257468 KNCNA6PVL3 124 aa12.25□□□□□ -0.45
UBQLN1-201ENST00000257468 HLA-DRB4P13762 266 aa12.25□□□□□ -0.45
UBQLN1-201ENST00000257468 HLA-DRB4X5D2U9 266 aa12.25□□□□□ -0.45
UBQLN1-201ENST00000257468 EPG5Q9HCE0 2579 aa12.24□□□□□ -0.45
UBQLN1-201ENST00000257468 AKAP9Q99996 3911 aa12.24□□□□□ -0.45
UBQLN1-201ENST00000257468 C9orf118A6NHY6 69 aa12.24□□□□□ -0.45
UBQLN1-201ENST00000257468 RPL39P62891 51 aaKnown RBP12.24□□□□□ -0.45
UBQLN1-201ENST00000257468 HIGD1BQ9P298 99 aa12.24□□□□□ -0.45
UBQLN1-201ENST00000257468 PRRC2AP48634 2157 aaKnown RBP12.24□□□□□ -0.45
UBQLN1-201ENST00000257468 CUBNO60494 3623 aa12.24□□□□□ -0.45
UBQLN1-201ENST00000257468 IGHV1OR15-1A0A075B7D0 117 aa12.23□□□□□ -0.45
UBQLN1-201ENST00000257468 PRSS29PA6NIE9 313 aa12.23□□□□□ -0.45
UBQLN1-201ENST00000257468 PPP1R17O96001 155 aa12.23□□□□□ -0.45
UBQLN1-201ENST00000257468 RBMY1A1P0DJD3 496 aaKnown RBP12.23□□□□□ -0.45
UBQLN1-201ENST00000257468 RBMY1CP0DJD4 496 aa12.23□□□□□ -0.45
UBQLN1-201ENST00000257468 RBMY1FQ15415 496 aaKnown RBP12.23□□□□□ -0.45
UBQLN1-201ENST00000257468 AMTNQ6UX39 209 aa12.23□□□□□ -0.45
UBQLN1-201ENST00000257468 TP53TG1Q9Y2A0 90 aa12.23□□□□□ -0.45
UBQLN1-201ENST00000257468 K7ERJ3 54 aa12.23□□□□□ -0.45
UBQLN1-201ENST00000257468 POLR2KP53803 58 aaKnown RBP12.23□□□□□ -0.45
UBQLN1-201ENST00000257468 RNF152Q8N8N0 203 aa12.23□□□□□ -0.45
UBQLN1-201ENST00000257468 TLN2Q9Y4G6 2542 aa12.23□□□□□ -0.45
UBQLN1-201ENST00000257468 SDHAF1A6NFY7 115 aa12.22□□□□□ -0.45
UBQLN1-201ENST00000257468 TSHBP01222 138 aa12.22□□□□□ -0.45
UBQLN1-201ENST00000257468 ZNF56Q15929 161 aa12.22□□□□□ -0.45
UBQLN1-201ENST00000257468 KHDC1LQ5JSQ8 128 aa12.22□□□□□ -0.45
UBQLN1-201ENST00000257468 ZFP2Q6ZN57 461 aa12.22□□□□□ -0.45
UBQLN1-201ENST00000257468 KRTAP1-3Q8IUG1 177 aa12.22□□□□□ -0.45
UBQLN1-201ENST00000257468 PRM2P04554 102 aa12.22□□□□□ -0.45
UBQLN1-201ENST00000257468 HTN1P15515 57 aa12.22□□□□□ -0.45
UBQLN1-201ENST00000257468 EMP1P54849 157 aa12.22□□□□□ -0.45
UBQLN1-201ENST00000257468 MORN3Q6PF18 240 aaPredicted RBP12.22□□□□□ -0.45
UBQLN1-201ENST00000257468 CRYGDP07320 174 aa12.21□□□□□ -0.45
UBQLN1-201ENST00000257468 FOXI2Q6ZQN5 318 aa12.21□□□□□ -0.45
UBQLN1-201ENST00000257468 OR11H1Q8NG94 326 aa12.21□□□□□ -0.45
UBQLN1-201ENST00000257468 ZNF256Q9Y2P7 627 aaPredicted RBP12.21□□□□□ -0.45
UBQLN1-201ENST00000257468 MYO9AB2RTY4 2548 aa12.21□□□□□ -0.45
UBQLN1-201ENST00000257468 DEFB131AP59861 70 aa12.21□□□□□ -0.46
UBQLN1-201ENST00000257468 CYSLTR1Q9Y271 337 aa12.21□□□□□ -0.46
UBQLN1-201ENST00000257468 GAGE10A6NGK3 116 aa12.2□□□□□ -0.46
UBQLN1-201ENST00000257468 LRRC75A-AS1Q8N1F1 130 aa12.2□□□□□ -0.46
UBQLN1-201ENST00000257468 M0QY20 66 aa12.19□□□□□ -0.46
UBQLN1-201ENST00000257468 VCYO14598 125 aa12.19□□□□□ -0.46
UBQLN1-201ENST00000257468 ZNF876PQ49A33 203 aa12.19□□□□□ -0.46
UBQLN1-201ENST00000257468 CEND1Q8N111 149 aa12.19□□□□□ -0.46
UBQLN1-201ENST00000257468 SYT8Q8NBV8 401 aa12.19□□□□□ -0.46
UBQLN1-201ENST00000257468 KIR2DL4Q99706 377 aa12.19□□□□□ -0.46
UBQLN1-201ENST00000257468 ITPR3Q14573 2671 aa12.19□□□□□ -0.46
UBQLN1-201ENST00000257468 IGIPA6NJ69 53 aa12.18□□□□□ -0.46
UBQLN1-201ENST00000257468 OR11H12B2RN74 326 aa12.18□□□□□ -0.46
UBQLN1-201ENST00000257468 RPL32P62910 135 aaKnown RBP12.18□□□□□ -0.46
UBQLN1-201ENST00000257468 TMEM61Q8N0U2 210 aa12.18□□□□□ -0.46
UBQLN1-201ENST00000257468 Q8N2B8 174 aa12.18□□□□□ -0.46
UBQLN1-201ENST00000257468 OR11H2Q8NH07 326 aa12.18□□□□□ -0.46
UBQLN1-201ENST00000257468 NHP2Q9NX24 153 aaKnown RBP12.18□□□□□ -0.46
UBQLN1-201ENST00000257468 RBMY1BA6NDE4 496 aaKnown RBP12.18□□□□□ -0.46
UBQLN1-201ENST00000257468 RBMY1EA6NEQ0 496 aaKnown RBP12.18□□□□□ -0.46
UBQLN1-201ENST00000257468 LINC01619G3V211 115 aa12.18□□□□□ -0.46
UBQLN1-201ENST00000257468 RBMY1DP0C7P1 496 aaKnown RBP12.18□□□□□ -0.46
UBQLN1-201ENST00000257468 SMIM13P0DJ93 91 aa12.18□□□□□ -0.46
UBQLN1-201ENST00000257468 HIST2H2BCQ6DN03 193 aa12.18□□□□□ -0.46
UBQLN1-201ENST00000257468 UFSP1Q6NVU6 142 aa12.18□□□□□ -0.46
UBQLN1-201ENST00000257468 SONP18583 2426 aaKnown RBP12.18□□□□□ -0.46
UBQLN1-201ENST00000257468 GAGE12BA1L429 117 aa12.17□□□□□ -0.46
UBQLN1-201ENST00000257468 CBY1Q9Y3M2 126 aa12.17□□□□□ -0.46
UBQLN1-201ENST00000257468 IGLV4-69A0A075B6H9 119 aa12.17□□□□□ -0.46
UBQLN1-201ENST00000257468 IGHV3-73A0A0B4J1V6 119 aa12.17□□□□□ -0.46
UBQLN1-201ENST00000257468 TRBV27A0A0K0K1C4 114 aa12.17□□□□□ -0.46
UBQLN1-201ENST00000257468 DLX4Q92988 240 aaPredicted RBP12.17□□□□□ -0.46
UBQLN1-201ENST00000257468 PRADC1Q9BSG0 188 aa12.17□□□□□ -0.46
UBQLN1-201ENST00000257468 CST9LQ9H4G1 147 aa12.17□□□□□ -0.46
UBQLN1-201ENST00000257468 MYMXA0A1B0GTQ4 84 aa12.16□□□□□ -0.46
UBQLN1-201ENST00000257468 A0A1W2PPM0 123 aa12.16□□□□□ -0.46
UBQLN1-201ENST00000257468 C11orf86A6NJI1 115 aa12.16□□□□□ -0.46
UBQLN1-201ENST00000257468 RBX1P62877 108 aa12.16□□□□□ -0.46
UBQLN1-201ENST00000257468 TM2D2Q9BX73 214 aa12.16□□□□□ -0.46
UBQLN1-201ENST00000257468 K7EP34 96 aa12.16□□□□□ -0.46
UBQLN1-201ENST00000257468 CD300EQ496F6 205 aaPredicted RBP12.16□□□□□ -0.46
UBQLN1-201ENST00000257468 KLHL30-AS1Q8NEE0 82 aa12.16□□□□□ -0.46
UBQLN1-201ENST00000257468 WFDC11Q8NEX6 87 aa12.16□□□□□ -0.46
UBQLN1-201ENST00000257468 PHLDA1Q8WV24 401 aaPredicted RBP12.16□□□□□ -0.46
UBQLN1-201ENST00000257468 HIST1H4GQ99525 98 aa12.16□□□□□ -0.46
UBQLN1-201ENST00000257468 OPRPNQ99935 248 aaPredicted RBP12.16□□□□□ -0.46
UBQLN1-201ENST00000257468 TENM4Q6N022 2769 aa12.15□□□□□ -0.46
UBQLN1-201ENST00000257468 NF1P21359 2839 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 196.7 ms