RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 CSTL1Q9H114 145 aa16.03■□□□□ 0.16
CLN6-201ENST00000249806 ESM1Q9NQ30 184 aa16.03■□□□□ 0.16
CLN6-201ENST00000249806 C12orf54Q6X4T0 127 aa16.03■□□□□ 0.16
CLN6-201ENST00000249806 MRPL35Q9NZE8 188 aaKnown RBP16.03■□□□□ 0.16
CLN6-201ENST00000249806 PEMTQ9UBM1 199 aa16.03■□□□□ 0.16
CLN6-201ENST00000249806 F5H697 171 aa16.02■□□□□ 0.16
CLN6-201ENST00000249806 PLA2G2AP14555 144 aa16.02■□□□□ 0.16
CLN6-201ENST00000249806 SUMO4Q6EEV6 95 aa16.02■□□□□ 0.16
CLN6-201ENST00000249806 TMEM160Q9NX00 188 aa16.02■□□□□ 0.16
CLN6-201ENST00000249806 KMT2BQ9UMN6 2715 aaPredicted RBP16.02■□□□□ 0.16
CLN6-201ENST00000249806 IGKV2D-26A0A0A0MRZ7 120 aa16.02■□□□□ 0.15
CLN6-201ENST00000249806 FAM74A4Q5TZK3 123 aa16.02■□□□□ 0.15
CLN6-201ENST00000249806 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.01■□□□□ 0.15
CLN6-201ENST00000249806 RBMY1A1P0DJD3 496 aaKnown RBP16.01■□□□□ 0.15
CLN6-201ENST00000249806 RBMY1CP0DJD4 496 aa16.01■□□□□ 0.15
CLN6-201ENST00000249806 RBMY1FQ15415 496 aaKnown RBP16.01■□□□□ 0.15
CLN6-201ENST00000249806 DPM2O94777 84 aa16■□□□□ 0.15
CLN6-201ENST00000249806 TOMM6Q96B49 74 aa16■□□□□ 0.15
CLN6-201ENST00000249806 MTORP42345 2549 aa16■□□□□ 0.15
CLN6-201ENST00000249806 PPP1R17O96001 155 aa16■□□□□ 0.15
CLN6-201ENST00000249806 GAGE1Q13065 139 aa16■□□□□ 0.15
CLN6-201ENST00000249806 SCGB3A1Q96QR1 104 aa16■□□□□ 0.15
CLN6-201ENST00000249806 COX11Q9Y6N1 276 aa16■□□□□ 0.15
CLN6-201ENST00000249806 HTN1P15515 57 aa15.99■□□□□ 0.15
CLN6-201ENST00000249806 GTSCR1Q86UQ5 136 aa15.99■□□□□ 0.15
CLN6-201ENST00000249806 A0A087WX48 190 aa15.99■□□□□ 0.15
CLN6-201ENST00000249806 KRTAP1-1Q07627 177 aa15.99■□□□□ 0.15
CLN6-201ENST00000249806 ZC2HC1BQ5TFG8 222 aa15.99■□□□□ 0.15
CLN6-201ENST00000249806 C2orf66Q6UXQ4 117 aa15.99■□□□□ 0.15
CLN6-201ENST00000249806 TTTY13Q9BZ97 58 aa15.99■□□□□ 0.15
CLN6-201ENST00000249806 J3QKU1 62 aa15.98■□□□□ 0.15
CLN6-201ENST00000249806 H3BMM0 161 aa15.98■□□□□ 0.15
CLN6-201ENST00000249806 K7EMI3 77 aa15.98■□□□□ 0.15
CLN6-201ENST00000249806 TEX29Q8N6K0 151 aa15.98■□□□□ 0.15
CLN6-201ENST00000249806 DYNLRB2Q8TF09 96 aa15.98■□□□□ 0.15
CLN6-201ENST00000249806 A0A1W2PRX2 142 aa15.97■□□□□ 0.15
CLN6-201ENST00000249806 RBMY1BA6NDE4 496 aaKnown RBP15.97■□□□□ 0.15
CLN6-201ENST00000249806 RBMY1EA6NEQ0 496 aaKnown RBP15.97■□□□□ 0.15
CLN6-201ENST00000249806 PRM2P04554 102 aa15.97■□□□□ 0.15
CLN6-201ENST00000249806 RBMY1DP0C7P1 496 aaKnown RBP15.97■□□□□ 0.15
CLN6-201ENST00000249806 HLA-DRB4P13762 266 aa15.97■□□□□ 0.15
CLN6-201ENST00000249806 HLA-DRB4X5D2U9 266 aa15.97■□□□□ 0.15
CLN6-201ENST00000249806 ANK3Q12955 4377 aaKnown RBP15.97■□□□□ 0.15
CLN6-201ENST00000249806 CRYGDP07320 174 aa15.96■□□□□ 0.15
CLN6-201ENST00000249806 POLR2KP53803 58 aaKnown RBP15.96■□□□□ 0.15
CLN6-201ENST00000249806 DEFB114Q30KQ6 69 aa15.96■□□□□ 0.15
CLN6-201ENST00000249806 SYT8Q8NBV8 401 aa15.96■□□□□ 0.15
CLN6-201ENST00000249806 CBY3A6NI87 242 aa15.96■□□□□ 0.15
CLN6-201ENST00000249806 ZNF876PQ49A33 203 aa15.96■□□□□ 0.15
CLN6-201ENST00000249806 TMEM97Q5BJF2 176 aa15.96■□□□□ 0.15
CLN6-201ENST00000249806 ERASQ7Z444 233 aa15.96■□□□□ 0.15
CLN6-201ENST00000249806 ORAOV1Q8WV07 137 aa15.96■□□□□ 0.15
CLN6-201ENST00000249806 RAX2Q96IS3 184 aa15.96■□□□□ 0.15
CLN6-201ENST00000249806 UNC79Q9P2D8 2635 aa15.95■□□□□ 0.14
CLN6-201ENST00000249806 TAX1BP3O14907 124 aa15.95■□□□□ 0.14
CLN6-201ENST00000249806 CD300EQ496F6 205 aaPredicted RBP15.95■□□□□ 0.14
CLN6-201ENST00000249806 YAE1D1Q9NRH1 226 aa15.95■□□□□ 0.14
CLN6-201ENST00000249806 ZNF56Q15929 161 aa15.94■□□□□ 0.14
CLN6-201ENST00000249806 MAP6D1Q9H9H5 199 aa15.94■□□□□ 0.14
CLN6-201ENST00000249806 CD28P10747 220 aa15.94■□□□□ 0.14
CLN6-201ENST00000249806 NEXN-AS1Q8NBZ9 246 aa15.94■□□□□ 0.14
CLN6-201ENST00000249806 TRAV2A0A0B4J234 112 aa15.93■□□□□ 0.14
CLN6-201ENST00000249806 SDHAF1A6NFY7 115 aa15.93■□□□□ 0.14
CLN6-201ENST00000249806 NIPBLQ6KC79 2804 aaeCLIP15.93■□□□□ 0.14
CLN6-201ENST00000249806 TRAV12-1A0A0B4J245 112 aa15.92■□□□□ 0.14
CLN6-201ENST00000249806 H7C1H1 209 aa15.92■□□□□ 0.14
CLN6-201ENST00000249806 SIVA1O15304 175 aa15.92■□□□□ 0.14
CLN6-201ENST00000249806 MORN3Q6PF18 240 aaPredicted RBP15.92■□□□□ 0.14
CLN6-201ENST00000249806 BAALCQ8WXS3 180 aa15.92■□□□□ 0.14
CLN6-201ENST00000249806 TRGV11A0A075B6L2 103 aa15.92■□□□□ 0.14
CLN6-201ENST00000249806 A8MTW9 85 aa15.92■□□□□ 0.14
CLN6-201ENST00000249806 F8VRH5 84 aa15.92■□□□□ 0.14
CLN6-201ENST00000249806 M0QY20 66 aa15.92■□□□□ 0.14
CLN6-201ENST00000249806 ZFP2Q6ZN57 461 aa15.92■□□□□ 0.14
CLN6-201ENST00000249806 VCYO14598 125 aa15.91■□□□□ 0.14
CLN6-201ENST00000249806 RPL32P62910 135 aaKnown RBP15.91■□□□□ 0.14
CLN6-201ENST00000249806 CHTOPQ9Y3Y2 248 aaKnown RBP15.91■□□□□ 0.14
CLN6-201ENST00000249806 ZNF256Q9Y2P7 627 aaPredicted RBP15.91■□□□□ 0.14
CLN6-201ENST00000249806 PLNP26678 52 aa15.9■□□□□ 0.14
CLN6-201ENST00000249806 RPL39P62891 51 aaKnown RBP15.9■□□□□ 0.14
CLN6-201ENST00000249806 KIR2DL4Q99706 377 aa15.9■□□□□ 0.14
CLN6-201ENST00000249806 TP53TG1Q9Y2A0 90 aa15.9■□□□□ 0.14
CLN6-201ENST00000249806 CITED2Q99967 270 aaPredicted RBP15.89■□□□□ 0.13
CLN6-201ENST00000249806 CYSLTR1Q9Y271 337 aa15.89■□□□□ 0.13
CLN6-201ENST00000249806 TRBV6-5A0A0K0K1A5 114 aa15.88■□□□□ 0.13
CLN6-201ENST00000249806 TRBV27A0A0K0K1C4 114 aa15.88■□□□□ 0.13
CLN6-201ENST00000249806 PRSS29PA6NIE9 313 aa15.88■□□□□ 0.13
CLN6-201ENST00000249806 CCL24O00175 119 aa15.88■□□□□ 0.13
CLN6-201ENST00000249806 FASNP49327 2511 aaKnown RBP15.88■□□□□ 0.13
CLN6-201ENST00000249806 CCL25O15444 150 aa15.88■□□□□ 0.13
CLN6-201ENST00000249806 TSHBP01222 138 aa15.88■□□□□ 0.13
CLN6-201ENST00000249806 TRAV8-6A0A0B4J262 113 aa15.87■□□□□ 0.13
CLN6-201ENST00000249806 HSD52Q0P140 79 aa15.87■□□□□ 0.13
CLN6-201ENST00000249806 FHL3Q13643 280 aa15.87■□□□□ 0.13
CLN6-201ENST00000249806 MAPKAPK5-AS1Q8N8E1 139 aa15.87■□□□□ 0.13
CLN6-201ENST00000249806 LINC01006Q8NI28 216 aa15.87■□□□□ 0.13
CLN6-201ENST00000249806 SEC11AP67812 179 aa15.87■□□□□ 0.13
CLN6-201ENST00000249806 SPAG8Q99932 426 aaPredicted RBP15.87■□□□□ 0.13
CLN6-201ENST00000249806 IGHV3-73A0A0B4J1V6 119 aa15.86■□□□□ 0.13
CLN6-201ENST00000249806 PTTG1IPP53801 180 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms