RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 IGLV1-51P01701 117 aa17.14■□□□□ 0.33
SYNGR3-201ENST00000248121 C14orf144Q96I85 54 aa17.14■□□□□ 0.33
SYNGR3-201ENST00000248121 MCRIP2Q9BUT9 160 aaKnown RBP17.14■□□□□ 0.33
SYNGR3-201ENST00000248121 MAP1LC3CQ9BXW4 147 aa17.14■□□□□ 0.33
SYNGR3-201ENST00000248121 HBDP02042 147 aa17.13■□□□□ 0.33
SYNGR3-201ENST00000248121 Q8N8P6 123 aa17.13■□□□□ 0.33
SYNGR3-201ENST00000248121 POM121L12Q8N7R1 296 aa17.12■□□□□ 0.33
SYNGR3-201ENST00000248121 RASL10AQ92737 203 aa17.12■□□□□ 0.33
SYNGR3-201ENST00000248121 DEFA6Q01524 100 aa17.11■□□□□ 0.33
SYNGR3-201ENST00000248121 SPATA45Q537H7 98 aa17.11■□□□□ 0.33
SYNGR3-201ENST00000248121 PET117Q6UWS5 81 aa17.11■□□□□ 0.33
SYNGR3-201ENST00000248121 NDUFAF3Q9BU61 184 aa17.11■□□□□ 0.33
SYNGR3-201ENST00000248121 MGPP08493 103 aa17.11■□□□□ 0.33
SYNGR3-201ENST00000248121 RPL39LQ96EH5 51 aaKnown RBP17.1■□□□□ 0.33
SYNGR3-201ENST00000248121 H0Y8G0 127 aa17.09■□□□□ 0.33
SYNGR3-201ENST00000248121 NOTCH3Q9UM47 2321 aa17.08■□□□□ 0.33
SYNGR3-201ENST00000248121 LINC01545Q5VT33 79 aa17.08■□□□□ 0.33
SYNGR3-201ENST00000248121 WFDC10AQ9H1F0 79 aa17.08■□□□□ 0.33
SYNGR3-201ENST00000248121 TRAV9-2A0A087WT02 112 aa17.08■□□□□ 0.32
SYNGR3-201ENST00000248121 PRM2P04554 102 aa17.08■□□□□ 0.32
SYNGR3-201ENST00000248121 A0A087WWL8 130 aa17.07■□□□□ 0.32
SYNGR3-201ENST00000248121 CBY3A6NI87 242 aa17.07■□□□□ 0.32
SYNGR3-201ENST00000248121 FCER1GP30273 86 aa17.07■□□□□ 0.32
SYNGR3-201ENST00000248121 ZNF705AQ6ZN79 300 aaPredicted RBP17.07■□□□□ 0.32
SYNGR3-201ENST00000248121 PMCHL2Q9BQD1 86 aa17.07■□□□□ 0.32
SYNGR3-201ENST00000248121 SMIM2Q9BVW6 85 aa17.06■□□□□ 0.32
SYNGR3-201ENST00000248121 TRGV11A0A075B6L2 103 aa17.06■□□□□ 0.32
SYNGR3-201ENST00000248121 C20orf202A1L168 122 aa17.06■□□□□ 0.32
SYNGR3-201ENST00000248121 TCAPO15273 167 aa17.06■□□□□ 0.32
SYNGR3-201ENST00000248121 CLUHP3Q96NS8 147 aa17.06■□□□□ 0.32
SYNGR3-201ENST00000248121 MIEN1Q9BRT3 115 aa17.06■□□□□ 0.32
SYNGR3-201ENST00000248121 STAB1Q9NY15 2570 aa17.06■□□□□ 0.32
SYNGR3-201ENST00000248121 SUMO2P61956 95 aaKnown RBP17.05■□□□□ 0.32
SYNGR3-201ENST00000248121 CTAG1AP78358 180 aa17.05■□□□□ 0.32
SYNGR3-201ENST00000248121 HTN1P15515 57 aa17.05■□□□□ 0.32
SYNGR3-201ENST00000248121 IGLL1P15814 213 aa17.05■□□□□ 0.32
SYNGR3-201ENST00000248121 TMEM158Q8WZ71 300 aa17.05■□□□□ 0.32
SYNGR3-201ENST00000248121 OR11H12B2RN74 326 aa17.04■□□□□ 0.32
SYNGR3-201ENST00000248121 SMIM17P0DL12 118 aa17.04■□□□□ 0.32
SYNGR3-201ENST00000248121 IFI27L1Q96BM0 104 aa17.04■□□□□ 0.32
SYNGR3-201ENST00000248121 C20orf78Q9BR46 151 aa17.04■□□□□ 0.32
SYNGR3-201ENST00000248121 CRYGDP07320 174 aa17.03■□□□□ 0.32
SYNGR3-201ENST00000248121 SUMO4Q6EEV6 95 aa17.03■□□□□ 0.32
SYNGR3-201ENST00000248121 IGLC3P0DOY3 106 aa17.03■□□□□ 0.32
SYNGR3-201ENST00000248121 LAGE3Q14657 143 aa17.03■□□□□ 0.32
SYNGR3-201ENST00000248121 SYT8Q8NBV8 401 aa17.03■□□□□ 0.32
SYNGR3-201ENST00000248121 BEAN1Q3B7T3 259 aa17.02■□□□□ 0.32
SYNGR3-201ENST00000248121 TRPT1Q86TN4 253 aaKnown RBP17.02■□□□□ 0.32
SYNGR3-201ENST00000248121 C18orf15Q96N68 181 aa17.02■□□□□ 0.32
SYNGR3-201ENST00000248121 C19orf73Q9NVV2 129 aa17.02■□□□□ 0.32
SYNGR3-201ENST00000248121 hDV102S1A0JD36 115 aa17.01■□□□□ 0.31
SYNGR3-201ENST00000248121 ZNF876PQ49A33 203 aa17.01■□□□□ 0.31
SYNGR3-201ENST00000248121 STHQ8IWL8 128 aa17.01■□□□□ 0.31
SYNGR3-201ENST00000248121 FAM74A4Q5TZK3 123 aa17■□□□□ 0.31
SYNGR3-201ENST00000248121 XCL2Q9UBD3 114 aa17■□□□□ 0.31
SYNGR3-201ENST00000248121 INSP01308 110 aa16.99■□□□□ 0.31
SYNGR3-201ENST00000248121 LGALS9BQ3B8N2 356 aa16.98■□□□□ 0.31
SYNGR3-201ENST00000248121 LGALS9CQ6DKI2 356 aa16.98■□□□□ 0.31
SYNGR3-201ENST00000248121 LINC00467Q9BRT7 94 aa16.98■□□□□ 0.31
SYNGR3-201ENST00000248121 F5H697 171 aa16.98■□□□□ 0.31
SYNGR3-201ENST00000248121 PPP1R17O96001 155 aa16.98■□□□□ 0.31
SYNGR3-201ENST00000248121 LINC01587Q99440 93 aa16.98■□□□□ 0.31
SYNGR3-201ENST00000248121 C11orf72Q8NBR9 251 aa16.97■□□□□ 0.31
SYNGR3-201ENST00000248121 CSTL1Q9H114 145 aa16.97■□□□□ 0.31
SYNGR3-201ENST00000248121 UQCR10Q9UDW1 63 aa16.97■□□□□ 0.31
SYNGR3-201ENST00000248121 C9orf66Q5T8R8 295 aa16.96■□□□□ 0.31
SYNGR3-201ENST00000248121 MORN3Q6PF18 240 aaPredicted RBP16.96■□□□□ 0.31
SYNGR3-201ENST00000248121 NEGR1Q7Z3B1 354 aa16.96■□□□□ 0.31
SYNGR3-201ENST00000248121 C1orf158Q8N1D5 194 aa16.96■□□□□ 0.31
SYNGR3-201ENST00000248121 C3orf56Q8N813 242 aa16.96■□□□□ 0.31
SYNGR3-201ENST00000248121 NACAE9PAV3 2078 aa16.95■□□□□ 0.3
SYNGR3-201ENST00000248121 M0QY20 66 aa16.95■□□□□ 0.3
SYNGR3-201ENST00000248121 POLR2KP53803 58 aaKnown RBP16.95■□□□□ 0.3
SYNGR3-201ENST00000248121 COL6A5A8TX70 2615 aa16.95■□□□□ 0.3
SYNGR3-201ENST00000248121 EREGO14944 169 aa16.94■□□□□ 0.3
SYNGR3-201ENST00000248121 NUDT3O95989 172 aa16.94■□□□□ 0.3
SYNGR3-201ENST00000248121 ZNF56Q15929 161 aa16.94■□□□□ 0.3
SYNGR3-201ENST00000248121 FAM110AQ9BQ89 295 aa16.94■□□□□ 0.3
SYNGR3-201ENST00000248121 ST20Q9HBF5 79 aa16.94■□□□□ 0.3
SYNGR3-201ENST00000248121 GOLT1BQ9Y3E0 138 aa16.94■□□□□ 0.3
SYNGR3-201ENST00000248121 RPL32P62910 135 aaKnown RBP16.93■□□□□ 0.3
SYNGR3-201ENST00000248121 ZNF415Q09FC8 603 aa16.93■□□□□ 0.3
SYNGR3-201ENST00000248121 SNHG12Q9BXW3 62 aa16.93■□□□□ 0.3
SYNGR3-201ENST00000248121 M0R2P5 195 aa16.93■□□□□ 0.3
SYNGR3-201ENST00000248121 GIG44P09565 113 aaPredicted RBP16.93■□□□□ 0.3
SYNGR3-201ENST00000248121 CMC4P56277 68 aaPredicted RBP16.93■□□□□ 0.3
SYNGR3-201ENST00000248121 ORMDL2Q53FV1 153 aa16.93■□□□□ 0.3
SYNGR3-201ENST00000248121 DKK2Q9UBU2 259 aa16.93■□□□□ 0.3
SYNGR3-201ENST00000248121 K7EMI3 77 aa16.92■□□□□ 0.3
SYNGR3-201ENST00000248121 AZU1P20160 251 aa16.92■□□□□ 0.3
SYNGR3-201ENST00000248121 C12orf54Q6X4T0 127 aa16.92■□□□□ 0.3
SYNGR3-201ENST00000248121 WFDC9Q8NEX5 89 aa16.92■□□□□ 0.3
SYNGR3-201ENST00000248121 TP73-AS1Q9UF72 201 aa16.92■□□□□ 0.3
SYNGR3-201ENST00000248121 TRBV6-5A0A0K0K1A5 114 aa16.92■□□□□ 0.3
SYNGR3-201ENST00000248121 CMYA5Q8N3K9 4069 aa16.91■□□□□ 0.3
SYNGR3-201ENST00000248121 INSL3P51460 131 aa16.91■□□□□ 0.3
SYNGR3-201ENST00000248121 ODF1Q14990 250 aa16.9■□□□□ 0.3
SYNGR3-201ENST00000248121 UFSP1Q6NVU6 142 aa16.9■□□□□ 0.3
SYNGR3-201ENST00000248121 Q6ZN92 141 aa16.9■□□□□ 0.3
SYNGR3-201ENST00000248121 HSBP1L1C9JCN9 74 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms