RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 MAP1LC3AQ9H492 121 aa13.59□□□□□ -0.23
TNFSF9-201ENST00000245817 JPT2Q9H910 190 aa13.59□□□□□ -0.23
TNFSF9-201ENST00000245817 VWFP04275 2813 aa13.59□□□□□ -0.23
TNFSF9-201ENST00000245817 A0A087WWL8 130 aa13.59□□□□□ -0.23
TNFSF9-201ENST00000245817 TRAV26-2A0A0B4J265 109 aa13.59□□□□□ -0.23
TNFSF9-201ENST00000245817 F5H697 171 aa13.59□□□□□ -0.23
TNFSF9-201ENST00000245817 TNFRSF6BO95407 300 aa13.59□□□□□ -0.23
TNFSF9-201ENST00000245817 AZU1P20160 251 aa13.59□□□□□ -0.23
TNFSF9-201ENST00000245817 APOC4P55056 127 aa13.59□□□□□ -0.23
TNFSF9-201ENST00000245817 PIK3CD-AS1Q5SR53 167 aa13.59□□□□□ -0.23
TNFSF9-201ENST00000245817 FAM74A4Q5TZK3 123 aa13.59□□□□□ -0.23
TNFSF9-201ENST00000245817 CSNK1G2-AS1Q8NCQ2 148 aa13.59□□□□□ -0.23
TNFSF9-201ENST00000245817 PTH2Q96A98 100 aa13.59□□□□□ -0.23
TNFSF9-201ENST00000245817 NOTCH3Q9UM47 2321 aa13.59□□□□□ -0.23
TNFSF9-201ENST00000245817 PMCHP20382 165 aa13.58□□□□□ -0.24
TNFSF9-201ENST00000245817 AMTP48728 403 aa13.58□□□□□ -0.24
TNFSF9-201ENST00000245817 RRN3P1Q2M238 152 aa13.58□□□□□ -0.24
TNFSF9-201ENST00000245817 KIR2DL5BA0A0G2JN68 375 aa13.57□□□□□ -0.24
TNFSF9-201ENST00000245817 KIR2DL5BA0A0G2JPC4 375 aa13.57□□□□□ -0.24
TNFSF9-201ENST00000245817 PPP1R17O96001 155 aa13.57□□□□□ -0.24
TNFSF9-201ENST00000245817 KIR2DL5AQ8N109 375 aa13.57□□□□□ -0.24
TNFSF9-201ENST00000245817 KIR2DL5BQ8NHK3 375 aa13.57□□□□□ -0.24
TNFSF9-201ENST00000245817 C16orf74Q96GX8 76 aa13.57□□□□□ -0.24
TNFSF9-201ENST00000245817 KIF25-AS1Q9Y6Z4 181 aa13.57□□□□□ -0.24
TNFSF9-201ENST00000245817 A8MWV9 139 aa13.56□□□□□ -0.24
TNFSF9-201ENST00000245817 ZNF705AQ6ZN79 300 aaPredicted RBP13.56□□□□□ -0.24
TNFSF9-201ENST00000245817 RNASE8Q8TDE3 154 aaKnown RBP13.56□□□□□ -0.24
TNFSF9-201ENST00000245817 GATA1P15976 413 aaPredicted RBP13.56□□□□□ -0.24
TNFSF9-201ENST00000245817 IFI27P40305 119 aaPredicted RBP13.56□□□□□ -0.24
TNFSF9-201ENST00000245817 ZNF56Q15929 161 aa13.56□□□□□ -0.24
TNFSF9-201ENST00000245817 AP5S1Q9NUS5 200 aa13.56□□□□□ -0.24
TNFSF9-201ENST00000245817 MUC4Q99102 2169 aa13.56□□□□□ -0.24
TNFSF9-201ENST00000245817 GAS8-AS1O95177 125 aa13.55□□□□□ -0.24
TNFSF9-201ENST00000245817 FAM19A2Q8N3H0 131 aa13.55□□□□□ -0.24
TNFSF9-201ENST00000245817 POM121L12Q8N7R1 296 aa13.55□□□□□ -0.24
TNFSF9-201ENST00000245817 NDUFAF3Q9BU61 184 aa13.55□□□□□ -0.24
TNFSF9-201ENST00000245817 CRYGDP07320 174 aa13.54□□□□□ -0.24
TNFSF9-201ENST00000245817 URB1-AS1Q96HZ7 61 aa13.54□□□□□ -0.24
TNFSF9-201ENST00000245817 NXT2Q9NPJ8 142 aaKnown RBP13.54□□□□□ -0.24
TNFSF9-201ENST00000245817 LINC00315P59091 139 aa13.53□□□□□ -0.24
TNFSF9-201ENST00000245817 EGFEM1PQ0D2K5 195 aa13.53□□□□□ -0.24
TNFSF9-201ENST00000245817 NRACQ8N912 160 aa13.53□□□□□ -0.24
TNFSF9-201ENST00000245817 MRPL16Q9NX20 251 aaKnown RBP13.53□□□□□ -0.24
TNFSF9-201ENST00000245817 TRGV1A0A0A0MS02 117 aa13.53□□□□□ -0.24
TNFSF9-201ENST00000245817 IGHV4-30-4P0DP06 118 aa13.53□□□□□ -0.24
TNFSF9-201ENST00000245817 RASL10AQ92737 203 aa13.53□□□□□ -0.24
TNFSF9-201ENST00000245817 SUMO4Q6EEV6 95 aa13.52□□□□□ -0.25
TNFSF9-201ENST00000245817 C20orf78Q9BR46 151 aa13.52□□□□□ -0.25
TNFSF9-201ENST00000245817 PKD1L1Q8TDX9 2849 aa13.52□□□□□ -0.25
TNFSF9-201ENST00000245817 KRTAP10-11P60412 298 aa13.51□□□□□ -0.25
TNFSF9-201ENST00000245817 DAZ2Q13117 558 aaKnown RBP13.51□□□□□ -0.25
TNFSF9-201ENST00000245817 LGALS9BQ3B8N2 356 aa13.51□□□□□ -0.25
TNFSF9-201ENST00000245817 IL17DQ8TAD2 202 aa13.51□□□□□ -0.25
TNFSF9-201ENST00000245817 NOP10Q9NPE3 64 aaKnown RBP13.51□□□□□ -0.25
TNFSF9-201ENST00000245817 SMIM9A6NGZ8 99 aa13.5□□□□□ -0.25
TNFSF9-201ENST00000245817 PRSS47A8MTI9 375 aa13.5□□□□□ -0.25
TNFSF9-201ENST00000245817 RHODO00212 210 aa13.5□□□□□ -0.25
TNFSF9-201ENST00000245817 Q8N8P6 123 aa13.5□□□□□ -0.25
TNFSF9-201ENST00000245817 H7C1H1 209 aa13.5□□□□□ -0.25
TNFSF9-201ENST00000245817 SUMO2P61956 95 aaKnown RBP13.5□□□□□ -0.25
TNFSF9-201ENST00000245817 PMCHL1Q16048 86 aa13.5□□□□□ -0.25
TNFSF9-201ENST00000245817 CFAP126Q5VTH2 177 aa13.5□□□□□ -0.25
TNFSF9-201ENST00000245817 RPL39LQ96EH5 51 aaKnown RBP13.5□□□□□ -0.25
TNFSF9-201ENST00000245817 IGHV3-73A0A0B4J1V6 119 aa13.49□□□□□ -0.25
TNFSF9-201ENST00000245817 IGHV1-24A0A0C4DH33 117 aa13.49□□□□□ -0.25
TNFSF9-201ENST00000245817 SMIM6P0DI80 62 aa13.49□□□□□ -0.25
TNFSF9-201ENST00000245817 ST20Q9HBF5 79 aa13.49□□□□□ -0.25
TNFSF9-201ENST00000245817 G3V4G9 280 aa13.48□□□□□ -0.25
TNFSF9-201ENST00000245817 RS1O15537 224 aa13.48□□□□□ -0.25
TNFSF9-201ENST00000245817 OR4C5Q8NGB2 326 aa13.48□□□□□ -0.25
TNFSF9-201ENST00000245817 DEFB135Q30KP9 77 aa13.47□□□□□ -0.25
TNFSF9-201ENST00000245817 SMIM2Q9BVW6 85 aa13.47□□□□□ -0.25
TNFSF9-201ENST00000245817 LEPROTL1O95214 131 aa13.47□□□□□ -0.25
TNFSF9-201ENST00000245817 EMP1P54849 157 aa13.47□□□□□ -0.25
TNFSF9-201ENST00000245817 Q6ZTI0 123 aa13.47□□□□□ -0.25
TNFSF9-201ENST00000245817 Q6ZWC4 215 aa13.47□□□□□ -0.25
TNFSF9-201ENST00000245817 OVOL2Q9BRP0 275 aa13.47□□□□□ -0.25
TNFSF9-201ENST00000245817 PLAC8L1A1L4L8 177 aa13.46□□□□□ -0.26
TNFSF9-201ENST00000245817 M0QY20 66 aa13.46□□□□□ -0.26
TNFSF9-201ENST00000245817 KRTDAPP60985 99 aa13.46□□□□□ -0.26
TNFSF9-201ENST00000245817 ZFP2Q6ZN57 461 aa13.46□□□□□ -0.26
TNFSF9-201ENST00000245817 LINC00518Q8N0U6 118 aa13.46□□□□□ -0.26
TNFSF9-201ENST00000245817 TRGV2A0A075B6R0 118 aa13.45□□□□□ -0.26
TNFSF9-201ENST00000245817 UFSP1Q6NVU6 142 aa13.45□□□□□ -0.26
TNFSF9-201ENST00000245817 C12orf57Q99622 126 aa13.45□□□□□ -0.26
TNFSF9-201ENST00000245817 NIT2Q9NQR4 276 aa13.45□□□□□ -0.26
TNFSF9-201ENST00000245817 HSPB8Q9UJY1 196 aa13.45□□□□□ -0.26
TNFSF9-201ENST00000245817 MGAM2Q2M2H8 2515 aa13.45□□□□□ -0.26
TNFSF9-201ENST00000245817 IGLV2-18A0A075B6J9 118 aa13.44□□□□□ -0.26
TNFSF9-201ENST00000245817 TRAV4A0A0B4J268 109 aa13.44□□□□□ -0.26
TNFSF9-201ENST00000245817 LINC01546A6NGU7 62 aa13.44□□□□□ -0.26
TNFSF9-201ENST00000245817 LAGE3Q14657 143 aa13.44□□□□□ -0.26
TNFSF9-201ENST00000245817 JOSD1Q15040 202 aaPredicted RBP13.44□□□□□ -0.26
TNFSF9-201ENST00000245817 PYY3Q5JQD4 70 aa13.44□□□□□ -0.26
TNFSF9-201ENST00000245817 SAMD5Q5TGI4 173 aa13.44□□□□□ -0.26
TNFSF9-201ENST00000245817 OR11H2Q8NH07 326 aa13.44□□□□□ -0.26
TNFSF9-201ENST00000245817 X6R8D5 127 aa13.44□□□□□ -0.26
TNFSF9-201ENST00000245817 TRBV6-5A0A0K0K1A5 114 aa13.44□□□□□ -0.26
TNFSF9-201ENST00000245817 GAGE12BA1L429 117 aa13.44□□□□□ -0.26
TNFSF9-201ENST00000245817 A8MZ25 164 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms