RNA–Protein interactions for RNA: ENST00000243103.3

HOXC12-201, Transcript of homeobox C12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC12, Length 3,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12-201ENST00000243103 FBN2P35556 2912 aa11.52□□□□□ -0.57
HOXC12-201ENST00000243103 ASIPP42127 132 aa11.52□□□□□ -0.57
HOXC12-201ENST00000243103 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.51□□□□□ -0.57
HOXC12-201ENST00000243103 F6UB75 175 aa11.51□□□□□ -0.57
HOXC12-201ENST00000243103 H3BRN7 92 aa11.51□□□□□ -0.57
HOXC12-201ENST00000243103 TIMD4Q96H15 378 aa11.51□□□□□ -0.57
HOXC12-201ENST00000243103 K7EIM0 57 aa11.51□□□□□ -0.57
HOXC12-201ENST00000243103 SMIM2Q9BVW6 85 aa11.51□□□□□ -0.57
HOXC12-201ENST00000243103 ZMAT4Q9H898 229 aa11.51□□□□□ -0.57
HOXC12-201ENST00000243103 TNFRSF13BO14836 293 aaPredicted RBP11.5□□□□□ -0.57
HOXC12-201ENST00000243103 SUMO2P61956 95 aaKnown RBP11.5□□□□□ -0.57
HOXC12-201ENST00000243103 TAL2Q16559 108 aa11.5□□□□□ -0.57
HOXC12-201ENST00000243103 IGLV3-9A0A075B6K5 115 aa11.5□□□□□ -0.57
HOXC12-201ENST00000243103 IGHV3-73A0A0B4J1V6 119 aa11.5□□□□□ -0.57
HOXC12-201ENST00000243103 CRYGCP07315 174 aa11.5□□□□□ -0.57
HOXC12-201ENST00000243103 LINC01620Q4KN68 170 aa11.5□□□□□ -0.57
HOXC12-201ENST00000243103 TNFRSF18Q9Y5U5 241 aa11.5□□□□□ -0.57
HOXC12-201ENST00000243103 NF1P21359 2839 aa11.5□□□□□ -0.57
HOXC12-201ENST00000243103 GNRH2O43555 120 aa11.49□□□□□ -0.57
HOXC12-201ENST00000243103 CDSNQ15517 529 aa11.49□□□□□ -0.57
HOXC12-201ENST00000243103 AGPAT4-IT1Q9H0P7 198 aa11.49□□□□□ -0.57
HOXC12-201ENST00000243103 A0A0J9YY99 117 aa11.49□□□□□ -0.57
HOXC12-201ENST00000243103 E7EQL1 145 aa11.49□□□□□ -0.57
HOXC12-201ENST00000243103 I3L2K1 104 aa11.49□□□□□ -0.57
HOXC12-201ENST00000243103 RNASE4P34096 147 aaKnown RBP11.49□□□□□ -0.57
HOXC12-201ENST00000243103 RPL13AP40429 203 aaKnown RBP11.49□□□□□ -0.57
HOXC12-201ENST00000243103 IGHV1-3A0A0C4DH29 117 aa11.48□□□□□ -0.57
HOXC12-201ENST00000243103 HIST2H2BDQ6DRA6 164 aa11.48□□□□□ -0.57
HOXC12-201ENST00000243103 RNASE6Q93091 150 aaKnown RBP11.48□□□□□ -0.57
HOXC12-201ENST00000243103 HIVEP2P31629 2446 aa11.48□□□□□ -0.57
HOXC12-201ENST00000243103 TEX22C9J3V5 150 aa11.48□□□□□ -0.57
HOXC12-201ENST00000243103 IGLC6P0CF74 106 aa11.48□□□□□ -0.57
HOXC12-201ENST00000243103 CLEC19AQ6UXS0 136 aa11.48□□□□□ -0.57
HOXC12-201ENST00000243103 OR10J6PQ8NGY7 276 aa11.48□□□□□ -0.57
HOXC12-201ENST00000243103 ATP6V0E2Q8NHE4 81 aa11.48□□□□□ -0.57
HOXC12-201ENST00000243103 ODF3Q96PU9 254 aa11.48□□□□□ -0.57
HOXC12-201ENST00000243103 TRAV13-1A0A0B4J241 112 aa11.47□□□□□ -0.57
HOXC12-201ENST00000243103 THBDP07204 575 aa11.47□□□□□ -0.57
HOXC12-201ENST00000243103 LOXP28300 417 aaPredicted RBP11.47□□□□□ -0.57
HOXC12-201ENST00000243103 INS-IGF2F8WCM5 200 aa11.47□□□□□ -0.57
HOXC12-201ENST00000243103 TMEM178BH3BS89 294 aa11.47□□□□□ -0.57
HOXC12-201ENST00000243103 MFAP4P55083 255 aa11.47□□□□□ -0.57
HOXC12-201ENST00000243103 IGHV1-8P0DP01 117 aa11.47□□□□□ -0.57
HOXC12-201ENST00000243103 C16orf92Q96LL3 132 aa11.47□□□□□ -0.57
HOXC12-201ENST00000243103 J3QQQ9 107 aa11.46□□□□□ -0.57
HOXC12-201ENST00000243103 MRGPRG-AS1Q2M3A8 158 aa11.46□□□□□ -0.57
HOXC12-201ENST00000243103 TMEM219Q86XT9 240 aa11.46□□□□□ -0.57
HOXC12-201ENST00000243103 VCX2Q9H322 139 aa11.46□□□□□ -0.57
HOXC12-201ENST00000243103 PRRC2AP48634 2157 aaKnown RBP11.46□□□□□ -0.57
HOXC12-201ENST00000243103 UBE2D3P61077 147 aa11.46□□□□□ -0.58
HOXC12-201ENST00000243103 UBE2D2P62837 147 aa11.46□□□□□ -0.58
HOXC12-201ENST00000243103 NRACQ8N912 160 aa11.46□□□□□ -0.58
HOXC12-201ENST00000243103 CEACAM4O75871 244 aa11.45□□□□□ -0.58
HOXC12-201ENST00000243103 ZNF883P0CG24 379 aa11.45□□□□□ -0.58
HOXC12-201ENST00000243103 UBE2D1P51668 147 aa11.45□□□□□ -0.58
HOXC12-201ENST00000243103 TMEM14CQ9P0S9 112 aa11.45□□□□□ -0.58
HOXC12-201ENST00000243103 PRB1P04280 392 aa11.45□□□□□ -0.58
HOXC12-201ENST00000243103 CFAP46Q8IYW2 2715 aa11.45□□□□□ -0.58
HOXC12-201ENST00000243103 MBD3L4A6NDZ8 208 aaPredicted RBP11.45□□□□□ -0.58
HOXC12-201ENST00000243103 MBD3L3A6NE82 208 aaPredicted RBP11.45□□□□□ -0.58
HOXC12-201ENST00000243103 MBD3L5A6NJ08 208 aaPredicted RBP11.45□□□□□ -0.58
HOXC12-201ENST00000243103 CD3EP07766 207 aa11.45□□□□□ -0.58
HOXC12-201ENST00000243103 MBD3L2Q8NHZ7 208 aaPredicted RBP11.45□□□□□ -0.58
HOXC12-201ENST00000243103 NIPBLQ6KC79 2804 aaeCLIP11.44□□□□□ -0.58
HOXC12-201ENST00000243103 TRIAP1O43715 76 aa11.44□□□□□ -0.58
HOXC12-201ENST00000243103 HERVK_113P63121 156 aa11.44□□□□□ -0.58
HOXC12-201ENST00000243103 ATXN8Q156A1 80 aa11.44□□□□□ -0.58
HOXC12-201ENST00000243103 HOXD3P31249 432 aaPredicted RBP11.44□□□□□ -0.58
HOXC12-201ENST00000243103 UBE2E1P51965 193 aa11.44□□□□□ -0.58
HOXC12-201ENST00000243103 ZNF462Q96JM2 2506 aa11.44□□□□□ -0.58
HOXC12-201ENST00000243103 hADV29S1A0JD25 119 aa11.43□□□□□ -0.58
HOXC12-201ENST00000243103 CSDC2Q9Y534 153 aaKnown RBP11.43□□□□□ -0.58
HOXC12-201ENST00000243103 GATD1Q8NB37 220 aa11.43□□□□□ -0.58
HOXC12-201ENST00000243103 HOXB4P17483 251 aaPredicted RBP11.43□□□□□ -0.58
HOXC12-201ENST00000243103 ORMDL2Q53FV1 153 aa11.43□□□□□ -0.58
HOXC12-201ENST00000243103 FAM19A5Q7Z5A7 132 aaPredicted RBP11.43□□□□□ -0.58
HOXC12-201ENST00000243103 NEXN-AS1Q8NBZ9 246 aa11.43□□□□□ -0.58
HOXC12-201ENST00000243103 SMAD5-AS1Q9Y6J3 95 aa11.43□□□□□ -0.58
HOXC12-201ENST00000243103 A0A0J9YXV3 536 aa11.42□□□□□ -0.58
HOXC12-201ENST00000243103 NPFFO15130 113 aa11.42□□□□□ -0.58
HOXC12-201ENST00000243103 IGHV3-30P01768 117 aa11.42□□□□□ -0.58
HOXC12-201ENST00000243103 IGHV3-30-5P0DP03 117 aa11.42□□□□□ -0.58
HOXC12-201ENST00000243103 C1orf162Q8NEQ5 155 aaPredicted RBP11.42□□□□□ -0.58
HOXC12-201ENST00000243103 LY6DQ14210 128 aa11.42□□□□□ -0.58
HOXC12-201ENST00000243103 IGLV2-18A0A075B6J9 118 aa11.42□□□□□ -0.58
HOXC12-201ENST00000243103 PRR9Q5T870 116 aa11.42□□□□□ -0.58
HOXC12-201ENST00000243103 IGHV3-33P01772 117 aa11.41□□□□□ -0.58
HOXC12-201ENST00000243103 IGKV3D-7A0A0C4DH55 119 aa11.41□□□□□ -0.58
HOXC12-201ENST00000243103 IGHV3-11P01762 117 aa11.41□□□□□ -0.58
HOXC12-201ENST00000243103 LY6EQ16553 131 aa11.41□□□□□ -0.58
HOXC12-201ENST00000243103 GAGE2AQ6NT46 116 aa11.41□□□□□ -0.58
HOXC12-201ENST00000243103 DSCR8Q96T75 97 aa11.41□□□□□ -0.58
HOXC12-201ENST00000243103 G3V318 75 aa11.4□□□□□ -0.58
HOXC12-201ENST00000243103 C15orf32Q32M92 178 aa11.4□□□□□ -0.58
HOXC12-201ENST00000243103 PVRIGQ6DKI7 326 aa11.4□□□□□ -0.58
HOXC12-201ENST00000243103 ZNRF2Q8NHG8 242 aa11.4□□□□□ -0.58
HOXC12-201ENST00000243103 RAB1BQ9H0U4 201 aa11.4□□□□□ -0.58
HOXC12-201ENST00000243103 CENPVL3A0A0U1RRI6 287 aa11.4□□□□□ -0.59
HOXC12-201ENST00000243103 SHISA9B4DS77 424 aa11.4□□□□□ -0.59
HOXC12-201ENST00000243103 HRCT1Q6UXD1 115 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms