RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 C2orf66Q6UXQ4 117 aa11.98□□□□□ -0.49
UBE3D-201ENST00000237186 Q8N1Y9 231 aa11.98□□□□□ -0.49
UBE3D-201ENST00000237186 SYT8Q8NBV8 401 aa11.98□□□□□ -0.49
UBE3D-201ENST00000237186 C4orf3Q8WVX3 66 aa11.98□□□□□ -0.49
UBE3D-201ENST00000237186 JPT2Q9H910 190 aa11.98□□□□□ -0.49
UBE3D-201ENST00000237186 MDFICQ9P1T7 246 aa11.98□□□□□ -0.49
UBE3D-201ENST00000237186 TRAV12-2A0A075B6T6 113 aa11.97□□□□□ -0.49
UBE3D-201ENST00000237186 SPINK13Q1W4C9 94 aa11.97□□□□□ -0.49
UBE3D-201ENST00000237186 ERASQ7Z444 233 aa11.97□□□□□ -0.49
UBE3D-201ENST00000237186 GTSCR1Q86UQ5 136 aa11.97□□□□□ -0.49
UBE3D-201ENST00000237186 WFDC11Q8NEX6 87 aa11.97□□□□□ -0.49
UBE3D-201ENST00000237186 VCYO14598 125 aa11.97□□□□□ -0.49
UBE3D-201ENST00000237186 IGKV3-20P01619 116 aa11.97□□□□□ -0.49
UBE3D-201ENST00000237186 SLURP1P55000 103 aa11.97□□□□□ -0.49
UBE3D-201ENST00000237186 C18orf65Q6ZTR6 163 aa11.97□□□□□ -0.49
UBE3D-201ENST00000237186 PEMTQ9UBM1 199 aa11.97□□□□□ -0.49
UBE3D-201ENST00000237186 MUC4Q99102 2169 aa11.96□□□□□ -0.49
UBE3D-201ENST00000237186 A6NDN8 102 aa11.95□□□□□ -0.5
UBE3D-201ENST00000237186 CRYGDP07320 174 aa11.95□□□□□ -0.5
UBE3D-201ENST00000237186 OR11H1Q8NG94 326 aa11.95□□□□□ -0.5
UBE3D-201ENST00000237186 TRGV11A0A075B6L2 103 aa11.95□□□□□ -0.5
UBE3D-201ENST00000237186 A0A087WWL8 130 aa11.95□□□□□ -0.5
UBE3D-201ENST00000237186 TRBV27A0A0K0K1C4 114 aa11.95□□□□□ -0.5
UBE3D-201ENST00000237186 H3BRM9 83 aa11.95□□□□□ -0.5
UBE3D-201ENST00000237186 VAMP3Q15836 100 aa11.95□□□□□ -0.5
UBE3D-201ENST00000237186 DEFB136Q30KP8 78 aa11.95□□□□□ -0.5
UBE3D-201ENST00000237186 BAALCQ8WXS3 180 aa11.95□□□□□ -0.5
UBE3D-201ENST00000237186 CHTOPQ9Y3Y2 248 aaKnown RBP11.95□□□□□ -0.5
UBE3D-201ENST00000237186 CYSLTR1Q9Y271 337 aa11.94□□□□□ -0.5
UBE3D-201ENST00000237186 ZNF256Q9Y2P7 627 aaPredicted RBP11.94□□□□□ -0.5
UBE3D-201ENST00000237186 M0QY20 66 aa11.93□□□□□ -0.5
UBE3D-201ENST00000237186 ZFP2Q6ZN57 461 aa11.93□□□□□ -0.5
UBE3D-201ENST00000237186 KIR2DL4Q99706 377 aa11.93□□□□□ -0.5
UBE3D-201ENST00000237186 TRBV25-1A0A075B6N4 114 aa11.93□□□□□ -0.5
UBE3D-201ENST00000237186 SDHAF1A6NFY7 115 aa11.93□□□□□ -0.5
UBE3D-201ENST00000237186 F5H697 171 aa11.93□□□□□ -0.5
UBE3D-201ENST00000237186 H3BMM0 161 aa11.93□□□□□ -0.5
UBE3D-201ENST00000237186 PRSS29PA6NIE9 313 aa11.92□□□□□ -0.5
UBE3D-201ENST00000237186 IGIPA6NJ69 53 aa11.92□□□□□ -0.5
UBE3D-201ENST00000237186 RIPPLY3P57055 190 aa11.92□□□□□ -0.5
UBE3D-201ENST00000237186 DEFB131AP59861 70 aa11.92□□□□□ -0.5
UBE3D-201ENST00000237186 TTTY13Q9BZ97 58 aa11.92□□□□□ -0.5
UBE3D-201ENST00000237186 TEX15Q9BXT5 2789 aa11.92□□□□□ -0.5
UBE3D-201ENST00000237186 CCDC168Q8NDH2 2452 aa11.91□□□□□ -0.5
UBE3D-201ENST00000237186 Q6ZSV7 163 aa11.91□□□□□ -0.5
UBE3D-201ENST00000237186 ITPR3Q14573 2671 aa11.91□□□□□ -0.5
UBE3D-201ENST00000237186 ZNF469Q96JG9 3925 aaPredicted RBP11.91□□□□□ -0.5
UBE3D-201ENST00000237186 RBMY1A1P0DJD3 496 aaKnown RBP11.91□□□□□ -0.5
UBE3D-201ENST00000237186 RBMY1CP0DJD4 496 aa11.91□□□□□ -0.5
UBE3D-201ENST00000237186 RBMY1FQ15415 496 aaKnown RBP11.91□□□□□ -0.5
UBE3D-201ENST00000237186 AMMECR1LQ6DCA0 310 aa11.91□□□□□ -0.5
UBE3D-201ENST00000237186 NEGR1Q7Z3B1 354 aa11.91□□□□□ -0.5
UBE3D-201ENST00000237186 TMEM61Q8N0U2 210 aa11.91□□□□□ -0.5
UBE3D-201ENST00000237186 DLX4Q92988 240 aaPredicted RBP11.91□□□□□ -0.5
UBE3D-201ENST00000237186 TMEM141Q96I45 108 aa11.91□□□□□ -0.5
UBE3D-201ENST00000237186 JMJD8Q96S16 334 aa11.91□□□□□ -0.5
UBE3D-201ENST00000237186 SPAG8Q99932 426 aaPredicted RBP11.91□□□□□ -0.5
UBE3D-201ENST00000237186 CHAC1Q9BUX1 264 aa11.91□□□□□ -0.5
UBE3D-201ENST00000237186 EDA2RQ9HAV5 297 aa11.91□□□□□ -0.5
UBE3D-201ENST00000237186 TRAV8-6A0A0B4J262 113 aa11.9□□□□□ -0.5
UBE3D-201ENST00000237186 C9orf118A6NHY6 69 aa11.9□□□□□ -0.5
UBE3D-201ENST00000237186 KNCNA6PVL3 124 aa11.9□□□□□ -0.5
UBE3D-201ENST00000237186 TSHBP01222 138 aa11.9□□□□□ -0.5
UBE3D-201ENST00000237186 ZNF876PQ49A33 203 aa11.9□□□□□ -0.5
UBE3D-201ENST00000237186 MORN3Q6PF18 240 aaPredicted RBP11.9□□□□□ -0.5
UBE3D-201ENST00000237186 MAPKAPK5-AS1Q8N8E1 139 aa11.9□□□□□ -0.5
UBE3D-201ENST00000237186 TIMM17AQ99595 171 aa11.9□□□□□ -0.5
UBE3D-201ENST00000237186 TM2D2Q9BX73 214 aa11.9□□□□□ -0.5
UBE3D-201ENST00000237186 AKAP9Q99996 3911 aa11.9□□□□□ -0.51
UBE3D-201ENST00000237186 PIK3CD-AS1Q5SR53 167 aa11.89□□□□□ -0.51
UBE3D-201ENST00000237186 TRPT1Q86TN4 253 aaKnown RBP11.89□□□□□ -0.51
UBE3D-201ENST00000237186 TP53TG1Q9Y2A0 90 aa11.89□□□□□ -0.51
UBE3D-201ENST00000237186 TAL2Q16559 108 aa11.89□□□□□ -0.51
UBE3D-201ENST00000237186 DEFB114Q30KQ6 69 aa11.89□□□□□ -0.51
UBE3D-201ENST00000237186 FAM74A4Q5TZK3 123 aa11.89□□□□□ -0.51
UBE3D-201ENST00000237186 OR4C5Q8NGB2 326 aa11.89□□□□□ -0.51
UBE3D-201ENST00000237186 UNC79Q9P2D8 2635 aa11.88□□□□□ -0.51
UBE3D-201ENST00000237186 PDZD2O15018 2839 aa11.88□□□□□ -0.51
UBE3D-201ENST00000237186 E9PLD3 99 aa11.88□□□□□ -0.51
UBE3D-201ENST00000237186 K7EP13 123 aa11.88□□□□□ -0.51
UBE3D-201ENST00000237186 RHOHQ15669 191 aa11.88□□□□□ -0.51
UBE3D-201ENST00000237186 ZNF56Q15929 161 aa11.88□□□□□ -0.51
UBE3D-201ENST00000237186 KLHL30-AS1Q8NEE0 82 aa11.88□□□□□ -0.51
UBE3D-201ENST00000237186 PTH2Q96A98 100 aa11.88□□□□□ -0.51
UBE3D-201ENST00000237186 LINC00467Q9BRT7 94 aa11.88□□□□□ -0.51
UBE3D-201ENST00000237186 RBMY1BA6NDE4 496 aaKnown RBP11.87□□□□□ -0.51
UBE3D-201ENST00000237186 RBMY1EA6NEQ0 496 aaKnown RBP11.87□□□□□ -0.51
UBE3D-201ENST00000237186 OR11H12B2RN74 326 aa11.87□□□□□ -0.51
UBE3D-201ENST00000237186 RBMY1DP0C7P1 496 aaKnown RBP11.87□□□□□ -0.51
UBE3D-201ENST00000237186 PAPPA-AS1Q5QFB9 102 aa11.87□□□□□ -0.51
UBE3D-201ENST00000237186 OR11H2Q8NH07 326 aa11.87□□□□□ -0.51
UBE3D-201ENST00000237186 MAP6D1Q9H9H5 199 aa11.87□□□□□ -0.51
UBE3D-201ENST00000237186 GCN1Q92616 2671 aaKnown RBP11.87□□□□□ -0.51
UBE3D-201ENST00000237186 DNAJC9-AS1A6NH13 148 aa11.87□□□□□ -0.51
UBE3D-201ENST00000237186 NSUN5P1Q3KNT7 163 aa11.87□□□□□ -0.51
UBE3D-201ENST00000237186 CLUHP3Q96NS8 147 aa11.87□□□□□ -0.51
UBE3D-201ENST00000237186 DUX3Q96PT4 197 aa11.87□□□□□ -0.51
UBE3D-201ENST00000237186 MYO9AB2RTY4 2548 aa11.86□□□□□ -0.51
UBE3D-201ENST00000237186 PMVKQ15126 192 aa11.86□□□□□ -0.51
UBE3D-201ENST00000237186 DYNLRB2Q8TF09 96 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 159 ms