RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 RASL10AQ92737 203 aa11.78□□□□□ -0.52
ITGA4-201ENST00000233573 MAP6D1Q9H9H5 199 aa11.78□□□□□ -0.52
ITGA4-201ENST00000233573 IGHV1OR15-1A0A075B7D0 117 aa11.77□□□□□ -0.52
ITGA4-201ENST00000233573 ADARB2-AS1A8MUL3 147 aa11.77□□□□□ -0.52
ITGA4-201ENST00000233573 RBMY1A1P0DJD3 496 aaKnown RBP11.77□□□□□ -0.52
ITGA4-201ENST00000233573 RBMY1CP0DJD4 496 aa11.77□□□□□ -0.52
ITGA4-201ENST00000233573 RBMY1FQ15415 496 aaKnown RBP11.77□□□□□ -0.52
ITGA4-201ENST00000233573 NSUN5P1Q3KNT7 163 aa11.77□□□□□ -0.52
ITGA4-201ENST00000233573 Q8N1Y9 231 aa11.77□□□□□ -0.52
ITGA4-201ENST00000233573 MDFICQ9P1T7 246 aa11.77□□□□□ -0.52
ITGA4-201ENST00000233573 TEP1Q99973 2627 aaKnown RBP11.77□□□□□ -0.53
ITGA4-201ENST00000233573 M0R143 59 aa11.77□□□□□ -0.53
ITGA4-201ENST00000233573 SPAG8Q99932 426 aaPredicted RBP11.77□□□□□ -0.53
ITGA4-201ENST00000233573 TENM1Q9UKZ4 2725 aa11.76□□□□□ -0.53
ITGA4-201ENST00000233573 H0Y8G0 127 aa11.76□□□□□ -0.53
ITGA4-201ENST00000233573 EREGO14944 169 aa11.76□□□□□ -0.53
ITGA4-201ENST00000233573 SNHG12Q9BXW3 62 aa11.76□□□□□ -0.53
ITGA4-201ENST00000233573 UQCR10Q9UDW1 63 aa11.76□□□□□ -0.53
ITGA4-201ENST00000233573 TRAV25A0A0B4J276 109 aa11.75□□□□□ -0.53
ITGA4-201ENST00000233573 IFI27L1Q96BM0 104 aa11.75□□□□□ -0.53
ITGA4-201ENST00000233573 PMCHL2Q9BQD1 86 aa11.75□□□□□ -0.53
ITGA4-201ENST00000233573 SMIM2Q9BVW6 85 aa11.75□□□□□ -0.53
ITGA4-201ENST00000233573 JPT2Q9H910 190 aa11.75□□□□□ -0.53
ITGA4-201ENST00000233573 hDV102S1A0JD36 115 aa11.74□□□□□ -0.53
ITGA4-201ENST00000233573 RPL39LQ96EH5 51 aaKnown RBP11.74□□□□□ -0.53
ITGA4-201ENST00000233573 C20orf78Q9BR46 151 aa11.74□□□□□ -0.53
ITGA4-201ENST00000233573 SUMO2P61956 95 aaKnown RBP11.74□□□□□ -0.53
ITGA4-201ENST00000233573 LGALS9BQ3B8N2 356 aa11.74□□□□□ -0.53
ITGA4-201ENST00000233573 LGALS9CQ6DKI2 356 aa11.74□□□□□ -0.53
ITGA4-201ENST00000233573 TMEM158Q8WZ71 300 aa11.74□□□□□ -0.53
ITGA4-201ENST00000233573 ST20Q9HBF5 79 aa11.74□□□□□ -0.53
ITGA4-201ENST00000233573 MGPP08493 103 aa11.73□□□□□ -0.53
ITGA4-201ENST00000233573 LAGE3Q14657 143 aa11.73□□□□□ -0.53
ITGA4-201ENST00000233573 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.73□□□□□ -0.53
ITGA4-201ENST00000233573 ODF3L2Q3SX64 289 aa11.72□□□□□ -0.53
ITGA4-201ENST00000233573 CLUHP3Q96NS8 147 aa11.72□□□□□ -0.53
ITGA4-201ENST00000233573 TRGV11A0A075B6L2 103 aa11.71□□□□□ -0.53
ITGA4-201ENST00000233573 PPP1R17O96001 155 aa11.71□□□□□ -0.54
ITGA4-201ENST00000233573 C18orf15Q96N68 181 aa11.71□□□□□ -0.54
ITGA4-201ENST00000233573 A0A087WWL8 130 aa11.7□□□□□ -0.54
ITGA4-201ENST00000233573 SMIM17P0DL12 118 aa11.7□□□□□ -0.54
ITGA4-201ENST00000233573 SUMO4Q6EEV6 95 aa11.7□□□□□ -0.54
ITGA4-201ENST00000233573 Q6ZN92 141 aa11.7□□□□□ -0.54
ITGA4-201ENST00000233573 ATRQ13535 2644 aa11.7□□□□□ -0.54
ITGA4-201ENST00000233573 VWFP04275 2813 aa11.69□□□□□ -0.54
ITGA4-201ENST00000233573 CRYGDP07320 174 aa11.69□□□□□ -0.54
ITGA4-201ENST00000233573 RPL32P62910 135 aaKnown RBP11.69□□□□□ -0.54
ITGA4-201ENST00000233573 SYT8Q8NBV8 401 aa11.69□□□□□ -0.54
ITGA4-201ENST00000233573 GOLT1BQ9Y3E0 138 aa11.69□□□□□ -0.54
ITGA4-201ENST00000233573 K7EMI3 77 aa11.69□□□□□ -0.54
ITGA4-201ENST00000233573 CBY3A6NI87 242 aa11.68□□□□□ -0.54
ITGA4-201ENST00000233573 HSBP1L1C9JCN9 74 aa11.68□□□□□ -0.54
ITGA4-201ENST00000233573 GAGE1Q13065 139 aa11.68□□□□□ -0.54
ITGA4-201ENST00000233573 LINC00467Q9BRT7 94 aa11.68□□□□□ -0.54
ITGA4-201ENST00000233573 HNRNPA3P51991 378 aaKnown RBP11.67□□□□□ -0.54
ITGA4-201ENST00000233573 NDUFA11Q86Y39 141 aa11.67□□□□□ -0.54
ITGA4-201ENST00000233573 MRPS16Q9Y3D3 137 aaKnown RBP11.67□□□□□ -0.54
ITGA4-201ENST00000233573 POLR2KP53803 58 aaKnown RBP11.67□□□□□ -0.54
ITGA4-201ENST00000233573 ODF1Q14990 250 aa11.67□□□□□ -0.54
ITGA4-201ENST00000233573 ORMDL2Q53FV1 153 aa11.67□□□□□ -0.54
ITGA4-201ENST00000233573 ZMAT4Q9H898 229 aa11.67□□□□□ -0.54
ITGA4-201ENST00000233573 DKK2Q9UBU2 259 aa11.67□□□□□ -0.54
ITGA4-201ENST00000233573 TP73-AS1Q9UF72 201 aa11.67□□□□□ -0.54
ITGA4-201ENST00000233573 SAP30O75446 220 aa11.66□□□□□ -0.54
ITGA4-201ENST00000233573 ATP5LO75964 103 aa11.66□□□□□ -0.54
ITGA4-201ENST00000233573 ZNF876PQ49A33 203 aa11.66□□□□□ -0.54
ITGA4-201ENST00000233573 CSTL1Q9H114 145 aa11.66□□□□□ -0.54
ITGA4-201ENST00000233573 PRM2P04554 102 aa11.66□□□□□ -0.54
ITGA4-201ENST00000233573 MORN3Q6PF18 240 aaPredicted RBP11.66□□□□□ -0.54
ITGA4-201ENST00000233573 TRBV6-5A0A0K0K1A5 114 aa11.65□□□□□ -0.54
ITGA4-201ENST00000233573 M0QY20 66 aa11.65□□□□□ -0.54
ITGA4-201ENST00000233573 NUDT3O95989 172 aa11.65□□□□□ -0.54
ITGA4-201ENST00000233573 IGLV1-51P01701 117 aa11.65□□□□□ -0.54
ITGA4-201ENST00000233573 ZNF25P17030 456 aaPredicted RBP11.65□□□□□ -0.54
ITGA4-201ENST00000233573 G0S2P27469 103 aa11.65□□□□□ -0.54
ITGA4-201ENST00000233573 FAM74A4Q5TZK3 123 aa11.65□□□□□ -0.54
ITGA4-201ENST00000233573 TRPT1Q86TN4 253 aaKnown RBP11.65□□□□□ -0.54
ITGA4-201ENST00000233573 TOMM6Q96B49 74 aa11.65□□□□□ -0.54
ITGA4-201ENST00000233573 F5H697 171 aa11.64□□□□□ -0.55
ITGA4-201ENST00000233573 ANKRD39Q53RE8 183 aa11.64□□□□□ -0.55
ITGA4-201ENST00000233573 OR11H12B2RN74 326 aa11.64□□□□□ -0.55
ITGA4-201ENST00000233573 DLEU1O43261 78 aa11.64□□□□□ -0.55
ITGA4-201ENST00000233573 INSP01308 110 aa11.64□□□□□ -0.55
ITGA4-201ENST00000233573 C11orf72Q8NBR9 251 aa11.64□□□□□ -0.55
ITGA4-201ENST00000233573 SPATA3Q8NHX4 192 aa11.64□□□□□ -0.55
ITGA4-201ENST00000233573 TRRAPQ9Y4A5 3859 aa11.64□□□□□ -0.55
ITGA4-201ENST00000233573 PF4P02776 101 aa11.63□□□□□ -0.55
ITGA4-201ENST00000233573 PRSS1P07477 247 aa11.63□□□□□ -0.55
ITGA4-201ENST00000233573 HTN1P15515 57 aa11.63□□□□□ -0.55
ITGA4-201ENST00000233573 SLC25A34Q6PIV7 304 aa11.63□□□□□ -0.55
ITGA4-201ENST00000233573 PTH2Q96A98 100 aa11.63□□□□□ -0.55
ITGA4-201ENST00000233573 COX8AP10176 69 aa11.63□□□□□ -0.55
ITGA4-201ENST00000233573 PIK3CD-AS1Q5SR53 167 aa11.63□□□□□ -0.55
ITGA4-201ENST00000233573 NEGR1Q7Z3B1 354 aa11.63□□□□□ -0.55
ITGA4-201ENST00000233573 STPG4Q8N801 248 aa11.63□□□□□ -0.55
ITGA4-201ENST00000233573 TRBV27A0A0K0K1C4 114 aa11.62□□□□□ -0.55
ITGA4-201ENST00000233573 ZNF56Q15929 161 aa11.62□□□□□ -0.55
ITGA4-201ENST00000233573 UFSP1Q6NVU6 142 aa11.62□□□□□ -0.55
ITGA4-201ENST00000233573 STHQ8IWL8 128 aa11.62□□□□□ -0.55
ITGA4-201ENST00000233573 TMEM208Q9BTX3 173 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms