RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 ORMDL2Q53FV1 153 aa14.11□□□□□ -0.15
YBX3-201ENST00000228251 RAX2Q96IS3 184 aa14.11□□□□□ -0.15
YBX3-201ENST00000228251 CUBNO60494 3623 aa14.11□□□□□ -0.15
YBX3-201ENST00000228251 KHDC1LQ5JSQ8 128 aa14.11□□□□□ -0.15
YBX3-201ENST00000228251 SUMO4Q6EEV6 95 aa14.11□□□□□ -0.15
YBX3-201ENST00000228251 ACANP16112 2415 aa14.11□□□□□ -0.15
YBX3-201ENST00000228251 BOD1L2Q8IYS8 172 aa14.1□□□□□ -0.15
YBX3-201ENST00000228251 TOMM6Q96B49 74 aa14.1□□□□□ -0.15
YBX3-201ENST00000228251 MAP6D1Q9H9H5 199 aa14.1□□□□□ -0.15
YBX3-201ENST00000228251 RNASE1P07998 156 aaKnown RBP14.09□□□□□ -0.15
YBX3-201ENST00000228251 POLR2KP53803 58 aaKnown RBP14.09□□□□□ -0.15
YBX3-201ENST00000228251 C16orf95Q9H693 158 aa14.09□□□□□ -0.15
YBX3-201ENST00000228251 ZNF256Q9Y2P7 627 aaPredicted RBP14.09□□□□□ -0.15
YBX3-201ENST00000228251 DLEU1O43261 78 aa14.09□□□□□ -0.15
YBX3-201ENST00000228251 NUDT3O95989 172 aa14.09□□□□□ -0.15
YBX3-201ENST00000228251 CRYGDP07320 174 aa14.09□□□□□ -0.15
YBX3-201ENST00000228251 PRSS1P07477 247 aa14.09□□□□□ -0.15
YBX3-201ENST00000228251 MPV17L2Q567V2 206 aa14.09□□□□□ -0.15
YBX3-201ENST00000228251 YAE1D1Q9NRH1 226 aa14.09□□□□□ -0.15
YBX3-201ENST00000228251 TRBV6-5A0A0K0K1A5 114 aa14.08□□□□□ -0.16
YBX3-201ENST00000228251 ZNF124Q15973 351 aa14.08□□□□□ -0.16
YBX3-201ENST00000228251 A0A087WWL8 130 aa14.07□□□□□ -0.16
YBX3-201ENST00000228251 CD28P10747 220 aa14.07□□□□□ -0.16
YBX3-201ENST00000228251 BVES-AS1Q5T3Y7 98 aa14.07□□□□□ -0.16
YBX3-201ENST00000228251 CSTL1Q9H114 145 aa14.07□□□□□ -0.16
YBX3-201ENST00000228251 TRGV11A0A075B6L2 103 aa14.06□□□□□ -0.16
YBX3-201ENST00000228251 A0A087WX48 190 aa14.06□□□□□ -0.16
YBX3-201ENST00000228251 TRAV12-1A0A0B4J245 112 aa14.06□□□□□ -0.16
YBX3-201ENST00000228251 CD300EQ496F6 205 aaPredicted RBP14.06□□□□□ -0.16
YBX3-201ENST00000228251 SYT8Q8NBV8 401 aa14.06□□□□□ -0.16
YBX3-201ENST00000228251 SPAG8Q99932 426 aaPredicted RBP14.06□□□□□ -0.16
YBX3-201ENST00000228251 TMEM208Q9BTX3 173 aa14.06□□□□□ -0.16
YBX3-201ENST00000228251 DPM2O94777 84 aa14.06□□□□□ -0.16
YBX3-201ENST00000228251 IGKCP01834 107 aa14.06□□□□□ -0.16
YBX3-201ENST00000228251 MORN3Q6PF18 240 aaPredicted RBP14.06□□□□□ -0.16
YBX3-201ENST00000228251 LINC01006Q8NI28 216 aa14.06□□□□□ -0.16
YBX3-201ENST00000228251 DYNLRB2Q8TF09 96 aa14.06□□□□□ -0.16
YBX3-201ENST00000228251 TRAV25A0A0B4J276 109 aa14.05□□□□□ -0.16
YBX3-201ENST00000228251 ZNF25P17030 456 aaPredicted RBP14.05□□□□□ -0.16
YBX3-201ENST00000228251 CLUHP3Q96NS8 147 aa14.05□□□□□ -0.16
YBX3-201ENST00000228251 MRPL35Q9NZE8 188 aaKnown RBP14.05□□□□□ -0.16
YBX3-201ENST00000228251 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.04□□□□□ -0.16
YBX3-201ENST00000228251 M0QY20 66 aa14.04□□□□□ -0.16
YBX3-201ENST00000228251 GAGE1Q13065 139 aa14.04□□□□□ -0.16
YBX3-201ENST00000228251 C12orf54Q6X4T0 127 aa14.04□□□□□ -0.16
YBX3-201ENST00000228251 CCL24O00175 119 aa14.04□□□□□ -0.16
YBX3-201ENST00000228251 C2orf66Q6UXQ4 117 aa14.04□□□□□ -0.16
YBX3-201ENST00000228251 NEXN-AS1Q8NBZ9 246 aa14.04□□□□□ -0.16
YBX3-201ENST00000228251 LINC00467Q9BRT7 94 aa14.04□□□□□ -0.16
YBX3-201ENST00000228251 IGKV2D-26A0A0A0MRZ7 120 aa14.03□□□□□ -0.16
YBX3-201ENST00000228251 TRBV27A0A0K0K1C4 114 aa14.03□□□□□ -0.16
YBX3-201ENST00000228251 SIVA1O15304 175 aa14.03□□□□□ -0.16
YBX3-201ENST00000228251 PCP2Q8IVA1 136 aa14.03□□□□□ -0.16
YBX3-201ENST00000228251 TMEM160Q9NX00 188 aa14.03□□□□□ -0.16
YBX3-201ENST00000228251 NACAE9PAV3 2078 aa14.03□□□□□ -0.16
YBX3-201ENST00000228251 ODF3L2Q3SX64 289 aa14.02□□□□□ -0.16
YBX3-201ENST00000228251 NEGR1Q7Z3B1 354 aa14.02□□□□□ -0.16
YBX3-201ENST00000228251 SCGB3A1Q96QR1 104 aa14.02□□□□□ -0.16
YBX3-201ENST00000228251 CITED2Q99967 270 aaPredicted RBP14.02□□□□□ -0.16
YBX3-201ENST00000228251 G0S2P27469 103 aa14.01□□□□□ -0.17
YBX3-201ENST00000228251 ZNF876PQ49A33 203 aa14.01□□□□□ -0.17
YBX3-201ENST00000228251 C11orf44Q8N8P7 122 aa14.01□□□□□ -0.17
YBX3-201ENST00000228251 EDA2RQ9HAV5 297 aa14.01□□□□□ -0.17
YBX3-201ENST00000228251 MTORP42345 2549 aa14.01□□□□□ -0.17
YBX3-201ENST00000228251 CBY3A6NI87 242 aa14.01□□□□□ -0.17
YBX3-201ENST00000228251 VCYO14598 125 aa14.01□□□□□ -0.17
YBX3-201ENST00000228251 RIPPLY3P57055 190 aa14.01□□□□□ -0.17
YBX3-201ENST00000228251 ZFP2Q6ZN57 461 aa14.01□□□□□ -0.17
YBX3-201ENST00000228251 ERASQ7Z444 233 aa14.01□□□□□ -0.17
YBX3-201ENST00000228251 PTH2Q96A98 100 aa14.01□□□□□ -0.17
YBX3-201ENST00000228251 JMJD8Q96S16 334 aa14.01□□□□□ -0.17
YBX3-201ENST00000228251 TSSC4Q9Y5U2 329 aaPredicted RBP14.01□□□□□ -0.17
YBX3-201ENST00000228251 SDHAF1A6NFY7 115 aa14□□□□□ -0.17
YBX3-201ENST00000228251 F8VRH5 84 aa14□□□□□ -0.17
YBX3-201ENST00000228251 HILS1P60008 231 aa14□□□□□ -0.17
YBX3-201ENST00000228251 FAM74A4Q5TZK3 123 aa14□□□□□ -0.17
YBX3-201ENST00000228251 BAALCQ8WXS3 180 aa14□□□□□ -0.17
YBX3-201ENST00000228251 A0A1W2PRX2 142 aa13.99□□□□□ -0.17
YBX3-201ENST00000228251 F5H697 171 aa13.99□□□□□ -0.17
YBX3-201ENST00000228251 PLNP26678 52 aa13.99□□□□□ -0.17
YBX3-201ENST00000228251 TCTAP57738 103 aa13.99□□□□□ -0.17
YBX3-201ENST00000228251 PIK3CD-AS1Q5SR53 167 aa13.99□□□□□ -0.17
YBX3-201ENST00000228251 ZC2HC1BQ5TFG8 222 aa13.99□□□□□ -0.17
YBX3-201ENST00000228251 ORAOV1Q8WV07 137 aa13.99□□□□□ -0.17
YBX3-201ENST00000228251 COX11Q9Y6N1 276 aa13.99□□□□□ -0.17
YBX3-201ENST00000228251 FASNP49327 2511 aaKnown RBP13.99□□□□□ -0.17
YBX3-201ENST00000228251 IGIPA6NJ69 53 aa13.99□□□□□ -0.17
YBX3-201ENST00000228251 H7C1H1 209 aa13.99□□□□□ -0.17
YBX3-201ENST00000228251 NMUP48645 174 aa13.99□□□□□ -0.17
YBX3-201ENST00000228251 UFSP1Q6NVU6 142 aa13.99□□□□□ -0.17
YBX3-201ENST00000228251 WNK1Q9H4A3 2382 aa13.98□□□□□ -0.17
YBX3-201ENST00000228251 LINC01549A6NIU2 74 aa13.98□□□□□ -0.17
YBX3-201ENST00000228251 TSHBP01222 138 aa13.98□□□□□ -0.17
YBX3-201ENST00000228251 SCGB2A2Q13296 93 aa13.98□□□□□ -0.17
YBX3-201ENST00000228251 Q6ZVH6 145 aa13.98□□□□□ -0.17
YBX3-201ENST00000228251 ADARB2-AS1A8MUL3 147 aa13.97□□□□□ -0.17
YBX3-201ENST00000228251 TAX1BP3O14907 124 aa13.97□□□□□ -0.17
YBX3-201ENST00000228251 NDUFA7O95182 113 aa13.97□□□□□ -0.17
YBX3-201ENST00000228251 ZNF56Q15929 161 aa13.97□□□□□ -0.17
YBX3-201ENST00000228251 TMEM97Q5BJF2 176 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms