RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 Q6ZVH6 145 aa7.31□□□□□ -1.24
CCDC113-201ENST00000219299 PRO1854Q9UHT4 67 aa7.31□□□□□ -1.24
CCDC113-201ENST00000219299 ITPR3Q14573 2671 aa7.31□□□□□ -1.24
CCDC113-201ENST00000219299 I3L2K1 104 aa7.31□□□□□ -1.24
CCDC113-201ENST00000219299 Q6YL49 198 aa7.31□□□□□ -1.24
CCDC113-201ENST00000219299 HCFC1P51610 2035 aa7.31□□□□□ -1.24
CCDC113-201ENST00000219299 C12orf74Q32Q52 190 aa7.3□□□□□ -1.24
CCDC113-201ENST00000219299 CHCHD5Q9BSY4 110 aa7.3□□□□□ -1.24
CCDC113-201ENST00000219299 CLPSL1A2RUU4 121 aa7.3□□□□□ -1.24
CCDC113-201ENST00000219299 VWC2LB2RUY7 222 aa7.3□□□□□ -1.24
CCDC113-201ENST00000219299 CTSGP08311 255 aa7.3□□□□□ -1.24
CCDC113-201ENST00000219299 PMVKQ15126 192 aa7.3□□□□□ -1.24
CCDC113-201ENST00000219299 SPXQ9BT56 116 aa7.3□□□□□ -1.24
CCDC113-201ENST00000219299 DMXL2Q8TDJ6 3036 aa7.3□□□□□ -1.24
CCDC113-201ENST00000219299 FLNAP21333 2647 aaKnown RBP7.3□□□□□ -1.24
CCDC113-201ENST00000219299 FGF6P10767 208 aa7.3□□□□□ -1.24
CCDC113-201ENST00000219299 THAP8Q8NA92 274 aa7.3□□□□□ -1.24
CCDC113-201ENST00000219299 LAMTOR3Q9UHA4 124 aa7.3□□□□□ -1.24
CCDC113-201ENST00000219299 TRACP01848 142 aa7.3□□□□□ -1.24
CCDC113-201ENST00000219299 HLA-DRB4P13762 266 aa7.3□□□□□ -1.24
CCDC113-201ENST00000219299 PRR20EP86478 221 aa7.3□□□□□ -1.24
CCDC113-201ENST00000219299 PRR20CP86479 221 aa7.3□□□□□ -1.24
CCDC113-201ENST00000219299 PRR20DP86480 221 aa7.3□□□□□ -1.24
CCDC113-201ENST00000219299 PRR20BP86481 221 aa7.3□□□□□ -1.24
CCDC113-201ENST00000219299 PRR20AP86496 221 aa7.3□□□□□ -1.24
CCDC113-201ENST00000219299 ZNF747Q9BV97 191 aa7.3□□□□□ -1.24
CCDC113-201ENST00000219299 HLA-DRB4X5D2U9 266 aa7.3□□□□□ -1.24
CCDC113-201ENST00000219299 ATRQ13535 2644 aa7.3□□□□□ -1.24
CCDC113-201ENST00000219299 TRBV19A0A075B6N1 114 aa7.29□□□□□ -1.24
CCDC113-201ENST00000219299 IGHV7-4-1A0A0J9YVY3 117 aa7.29□□□□□ -1.24
CCDC113-201ENST00000219299 LY6LH3BQJ8 138 aa7.29□□□□□ -1.24
CCDC113-201ENST00000219299 K7EN84 100 aa7.29□□□□□ -1.24
CCDC113-201ENST00000219299 JPT2Q9H910 190 aa7.29□□□□□ -1.24
CCDC113-201ENST00000219299 MRPL35Q9NZE8 188 aaKnown RBP7.29□□□□□ -1.24
CCDC113-201ENST00000219299 MRPL36Q9P0J6 103 aaKnown RBP7.29□□□□□ -1.24
CCDC113-201ENST00000219299 F8VRH5 84 aa7.29□□□□□ -1.24
CCDC113-201ENST00000219299 K7ERJ3 54 aa7.29□□□□□ -1.24
CCDC113-201ENST00000219299 SOCS3O14543 225 aa7.29□□□□□ -1.24
CCDC113-201ENST00000219299 ERCC8Q13216 396 aa7.29□□□□□ -1.24
CCDC113-201ENST00000219299 CITED2Q99967 270 aaPredicted RBP7.29□□□□□ -1.24
CCDC113-201ENST00000219299 A0A087WX48 190 aa7.29□□□□□ -1.24
CCDC113-201ENST00000219299 TRGV1A0A0A0MS02 117 aa7.29□□□□□ -1.24
CCDC113-201ENST00000219299 CRYGCP07315 174 aa7.29□□□□□ -1.24
CCDC113-201ENST00000219299 HLA-DMBP28068 263 aa7.29□□□□□ -1.24
CCDC113-201ENST00000219299 APOC4P55056 127 aa7.29□□□□□ -1.24
CCDC113-201ENST00000219299 FANCD2OSQ96PS1 177 aa7.29□□□□□ -1.24
CCDC113-201ENST00000219299 TP53TG1Q9Y2A0 90 aa7.29□□□□□ -1.24
CCDC113-201ENST00000219299 FRYQ5TBA9 3013 aa7.29□□□□□ -1.24
CCDC113-201ENST00000219299 AMTNQ6UX39 209 aa7.29□□□□□ -1.24
CCDC113-201ENST00000219299 TMEM14CQ9P0S9 112 aa7.29□□□□□ -1.24
CCDC113-201ENST00000219299 TEP1Q99973 2627 aaKnown RBP7.29□□□□□ -1.24
CCDC113-201ENST00000219299 B5MCH6 92 aa7.29□□□□□ -1.24
CCDC113-201ENST00000219299 PRIMA1Q86XR5 153 aa7.29□□□□□ -1.24
CCDC113-201ENST00000219299 MBD6Q96DN6 1003 aa7.29□□□□□ -1.24
CCDC113-201ENST00000219299 XCL2Q9UBD3 114 aa7.29□□□□□ -1.24
CCDC113-201ENST00000219299 TEX48A0A1B0GUV7 120 aa7.28□□□□□ -1.24
CCDC113-201ENST00000219299 RHODO00212 210 aa7.28□□□□□ -1.24
CCDC113-201ENST00000219299 TRPT1Q86TN4 253 aaKnown RBP7.28□□□□□ -1.24
CCDC113-201ENST00000219299 C8orf49Q96NF6 230 aa7.28□□□□□ -1.24
CCDC113-201ENST00000219299 IGHV4OR15-8A0A075B7B6 117 aa7.28□□□□□ -1.24
CCDC113-201ENST00000219299 A0A087WW49 117 aa7.28□□□□□ -1.24
CCDC113-201ENST00000219299 H3BRN7 92 aa7.28□□□□□ -1.24
CCDC113-201ENST00000219299 NPYP01303 97 aa7.28□□□□□ -1.24
CCDC113-201ENST00000219299 C15orf53Q8NAA6 179 aa7.28□□□□□ -1.24
CCDC113-201ENST00000219299 SS18L2Q9UHA2 77 aa7.28□□□□□ -1.24
CCDC113-201ENST00000219299 NUPR1O60356 82 aa7.27□□□□□ -1.25
CCDC113-201ENST00000219299 SPEGQ15772 3267 aa7.27□□□□□ -1.25
CCDC113-201ENST00000219299 SPINK13Q1W4C9 94 aa7.27□□□□□ -1.25
CCDC113-201ENST00000219299 P0C879 139 aa7.27□□□□□ -1.25
CCDC113-201ENST00000219299 DEFB104AQ8WTQ1 72 aa7.27□□□□□ -1.25
CCDC113-201ENST00000219299 C17orf77Q96MU5 243 aa7.27□□□□□ -1.25
CCDC113-201ENST00000219299 IGKV1OR2-108A0A075B7D4 117 aa7.27□□□□□ -1.25
CCDC113-201ENST00000219299 EBI3Q14213 229 aa7.27□□□□□ -1.25
CCDC113-201ENST00000219299 ZNF625Q96I27 306 aaPredicted RBP7.27□□□□□ -1.25
CCDC113-201ENST00000219299 RAI1Q7Z5J4 1906 aaPredicted RBP7.27□□□□□ -1.25
CCDC113-201ENST00000219299 TDRG1Q3Y452 100 aa7.27□□□□□ -1.25
CCDC113-201ENST00000219299 PLA2G2EQ9NZK7 142 aa7.27□□□□□ -1.25
CCDC113-201ENST00000219299 TRBV12-3P01733 135 aa7.26□□□□□ -1.25
CCDC113-201ENST00000219299 PRR25Q96S07 402 aa7.26□□□□□ -1.25
CCDC113-201ENST00000219299 DKK2Q9UBU2 259 aa7.26□□□□□ -1.25
CCDC113-201ENST00000219299 Q6ZSV7 163 aa7.26□□□□□ -1.25
CCDC113-201ENST00000219299 ANKRD29Q8N6D5 301 aa7.26□□□□□ -1.25
CCDC113-201ENST00000219299 A0A087WWL8 130 aa7.26□□□□□ -1.25
CCDC113-201ENST00000219299 IGHG4P01861 327 aa7.26□□□□□ -1.25
CCDC113-201ENST00000219299 EIF4EBP1Q13541 118 aaPredicted RBP7.26□□□□□ -1.25
CCDC113-201ENST00000219299 MORN5Q5VZ52 161 aa7.26□□□□□ -1.25
CCDC113-201ENST00000219299 NTN5Q8WTR8 489 aaPredicted RBP7.26□□□□□ -1.25
CCDC113-201ENST00000219299 FXYD5Q96DB9 178 aa7.26□□□□□ -1.25
CCDC113-201ENST00000219299 BOD1L1Q8NFC6 3051 aa7.26□□□□□ -1.25
CCDC113-201ENST00000219299 DMXL1Q9Y485 3027 aa7.26□□□□□ -1.25
CCDC113-201ENST00000219299 KNCNA6PVL3 124 aa7.26□□□□□ -1.25
CCDC113-201ENST00000219299 CARD19Q96LW7 228 aa7.26□□□□□ -1.25
CCDC113-201ENST00000219299 SMIM2Q9BVW6 85 aa7.26□□□□□ -1.25
CCDC113-201ENST00000219299 IGHV3-73A0A0B4J1V6 119 aa7.25□□□□□ -1.25
CCDC113-201ENST00000219299 IGLL5B9A064 214 aa7.25□□□□□ -1.25
CCDC113-201ENST00000219299 C10orf99Q6UWK7 81 aa7.25□□□□□ -1.25
CCDC113-201ENST00000219299 SCRT2Q9NQ03 307 aa7.25□□□□□ -1.25
CCDC113-201ENST00000219299 F6UB75 175 aa7.25□□□□□ -1.25
CCDC113-201ENST00000219299 LTAP01374 205 aa7.25□□□□□ -1.25
CCDC113-201ENST00000219299 C1orf159Q96HA4 380 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms