RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 ZNF815PA8K554 130 aa11.38□□□□□ -0.59
EFNB1-201ENST00000204961 PLEKHB2Q96CS7 222 aa11.38□□□□□ -0.59
EFNB1-201ENST00000204961 TRAV21A0A0B4J279 112 aa11.38□□□□□ -0.59
EFNB1-201ENST00000204961 OOSP1A8MZH6 123 aa11.38□□□□□ -0.59
EFNB1-201ENST00000204961 NPC2P61916 151 aa11.38□□□□□ -0.59
EFNB1-201ENST00000204961 ATP5LO75964 103 aa11.38□□□□□ -0.59
EFNB1-201ENST00000204961 C1orf122Q6ZSJ8 110 aa11.38□□□□□ -0.59
EFNB1-201ENST00000204961 TP53TG1Q9Y2A0 90 aa11.38□□□□□ -0.59
EFNB1-201ENST00000204961 TRAV26-1A0A087WT03 109 aa11.37□□□□□ -0.59
EFNB1-201ENST00000204961 SPAG8Q99932 426 aaPredicted RBP11.37□□□□□ -0.59
EFNB1-201ENST00000204961 IGHV3OR16-12A0A075B7B8 117 aa11.37□□□□□ -0.59
EFNB1-201ENST00000204961 RAB9AP51151 201 aa11.37□□□□□ -0.59
EFNB1-201ENST00000204961 CEND1Q8N111 149 aa11.37□□□□□ -0.59
EFNB1-201ENST00000204961 ZNF48Q96MX3 618 aaPredicted RBP11.37□□□□□ -0.59
EFNB1-201ENST00000204961 PRADC1Q9BSG0 188 aa11.37□□□□□ -0.59
EFNB1-201ENST00000204961 P0DMU3 169 aa11.37□□□□□ -0.59
EFNB1-201ENST00000204961 FAM231AP0DMU4 169 aa11.37□□□□□ -0.59
EFNB1-201ENST00000204961 FAM231CP0DMU5 169 aa11.37□□□□□ -0.59
EFNB1-201ENST00000204961 BEX4Q9NWD9 120 aaPredicted RBP11.37□□□□□ -0.59
EFNB1-201ENST00000204961 IGLL5B9A064 214 aa11.36□□□□□ -0.59
EFNB1-201ENST00000204961 PIMREGQ9BSJ6 248 aa11.36□□□□□ -0.59
EFNB1-201ENST00000204961 IGLV2-18A0A075B6J9 118 aa11.36□□□□□ -0.59
EFNB1-201ENST00000204961 UCNP55089 124 aa11.36□□□□□ -0.59
EFNB1-201ENST00000204961 ITPR3Q14573 2671 aa11.36□□□□□ -0.59
EFNB1-201ENST00000204961 C9orf139Q6ZV77 190 aa11.35□□□□□ -0.59
EFNB1-201ENST00000204961 C20orf78Q9BR46 151 aa11.35□□□□□ -0.59
EFNB1-201ENST00000204961 DPH3P1Q9H4G8 78 aa11.35□□□□□ -0.59
EFNB1-201ENST00000204961 A0A087WX48 190 aa11.35□□□□□ -0.59
EFNB1-201ENST00000204961 J3QR89 54 aa11.35□□□□□ -0.59
EFNB1-201ENST00000204961 CEMP1Q6PRD7 247 aaPredicted RBP11.35□□□□□ -0.59
EFNB1-201ENST00000204961 C9orf47Q6ZRZ4 202 aa11.35□□□□□ -0.59
EFNB1-201ENST00000204961 USP24Q9UPU5 2620 aa11.35□□□□□ -0.59
EFNB1-201ENST00000204961 SIVA1O15304 175 aa11.35□□□□□ -0.59
EFNB1-201ENST00000204961 C12orf74Q32Q52 190 aa11.35□□□□□ -0.59
EFNB1-201ENST00000204961 PTH2Q96A98 100 aa11.35□□□□□ -0.59
EFNB1-201ENST00000204961 MRPL16Q9NX20 251 aaKnown RBP11.35□□□□□ -0.59
EFNB1-201ENST00000204961 PROK1P58294 105 aa11.34□□□□□ -0.59
EFNB1-201ENST00000204961 CKS1BP61024 79 aa11.34□□□□□ -0.59
EFNB1-201ENST00000204961 GAGE13Q4V321 117 aa11.34□□□□□ -0.59
EFNB1-201ENST00000204961 SPANXB1Q9NS25 103 aaPredicted RBP11.34□□□□□ -0.59
EFNB1-201ENST00000204961 RNASE3P12724 160 aaKnown RBP11.34□□□□□ -0.59
EFNB1-201ENST00000204961 PGPEP1Q9NXJ5 209 aa11.34□□□□□ -0.59
EFNB1-201ENST00000204961 GCN1Q92616 2671 aaKnown RBP11.34□□□□□ -0.59
EFNB1-201ENST00000204961 DEFB112Q30KQ8 113 aa11.34□□□□□ -0.59
EFNB1-201ENST00000204961 C18orf65Q6ZTR6 163 aa11.34□□□□□ -0.59
EFNB1-201ENST00000204961 LINC01549A6NIU2 74 aa11.33□□□□□ -0.6
EFNB1-201ENST00000204961 A0A0U1RRA0 63 aa11.33□□□□□ -0.6
EFNB1-201ENST00000204961 H7C1H1 209 aa11.33□□□□□ -0.6
EFNB1-201ENST00000204961 NDUFS8O00217 210 aa11.33□□□□□ -0.6
EFNB1-201ENST00000204961 PSMB2P49721 201 aa11.33□□□□□ -0.6
EFNB1-201ENST00000204961 BAALCQ8WXS3 180 aa11.33□□□□□ -0.6
EFNB1-201ENST00000204961 IGHV3-16A0A0C4DH30 117 aa11.32□□□□□ -0.6
EFNB1-201ENST00000204961 F8VRH5 84 aa11.32□□□□□ -0.6
EFNB1-201ENST00000204961 FOXI2Q6ZQN5 318 aa11.32□□□□□ -0.6
EFNB1-201ENST00000204961 Q9UF83 564 aa11.32□□□□□ -0.6
EFNB1-201ENST00000204961 ZNF580Q9UK33 172 aa11.32□□□□□ -0.6
EFNB1-201ENST00000204961 A0A1B0GV72 72 aa11.32□□□□□ -0.6
EFNB1-201ENST00000204961 RAX2Q96IS3 184 aa11.32□□□□□ -0.6
EFNB1-201ENST00000204961 SDHAF1A6NFY7 115 aa11.32□□□□□ -0.6
EFNB1-201ENST00000204961 C11orf86A6NJI1 115 aa11.32□□□□□ -0.6
EFNB1-201ENST00000204961 ATP6V0BQ99437 205 aa11.32□□□□□ -0.6
EFNB1-201ENST00000204961 DAZ1Q9NQZ3 744 aaKnown RBP11.32□□□□□ -0.6
EFNB1-201ENST00000204961 IGHV3-38A0A0C4DH36 116 aa11.31□□□□□ -0.6
EFNB1-201ENST00000204961 A0A1W2PRX2 142 aa11.31□□□□□ -0.6
EFNB1-201ENST00000204961 ZFP2Q6ZN57 461 aa11.31□□□□□ -0.6
EFNB1-201ENST00000204961 CRYBA4P53673 196 aa11.31□□□□□ -0.6
EFNB1-201ENST00000204961 SUMO4Q6EEV6 95 aa11.31□□□□□ -0.6
EFNB1-201ENST00000204961 SCGB1C2P0DMR2 95 aa11.3□□□□□ -0.6
EFNB1-201ENST00000204961 PHLDA1Q8WV24 401 aaPredicted RBP11.3□□□□□ -0.6
EFNB1-201ENST00000204961 CNFNQ9BYD5 112 aa11.3□□□□□ -0.6
EFNB1-201ENST00000204961 SYT8Q8NBV8 401 aa11.3□□□□□ -0.6
EFNB1-201ENST00000204961 RBAKDNA6NC62 111 aa11.3□□□□□ -0.6
EFNB1-201ENST00000204961 MSMBP08118 114 aa11.3□□□□□ -0.6
EFNB1-201ENST00000204961 RNF223E7ERA6 249 aa11.29□□□□□ -0.6
EFNB1-201ENST00000204961 NDUFA4O00483 81 aa11.29□□□□□ -0.6
EFNB1-201ENST00000204961 Q8N1Y9 231 aa11.29□□□□□ -0.6
EFNB1-201ENST00000204961 HECTD1Q9ULT8 2610 aa11.29□□□□□ -0.6
EFNB1-201ENST00000204961 E9PLD3 99 aa11.29□□□□□ -0.6
EFNB1-201ENST00000204961 PRSS2P07478 247 aa11.29□□□□□ -0.6
EFNB1-201ENST00000204961 ZNF876PQ49A33 203 aa11.29□□□□□ -0.6
EFNB1-201ENST00000204961 ITPR2Q14571 2701 aa11.29□□□□□ -0.6
EFNB1-201ENST00000204961 MYMXA0A1B0GTQ4 84 aa11.29□□□□□ -0.6
EFNB1-201ENST00000204961 OVOL1O14753 267 aa11.29□□□□□ -0.6
EFNB1-201ENST00000204961 LGALS1P09382 135 aaKnown RBP11.29□□□□□ -0.6
EFNB1-201ENST00000204961 FASNP49327 2511 aaKnown RBP11.28□□□□□ -0.6
EFNB1-201ENST00000204961 FAM223BA6NKX1 122 aa11.28□□□□□ -0.6
EFNB1-201ENST00000204961 A8MZ25 164 aa11.28□□□□□ -0.6
EFNB1-201ENST00000204961 ORMDL2Q53FV1 153 aa11.28□□□□□ -0.6
EFNB1-201ENST00000204961 FAM223AQ8IWN6 122 aa11.28□□□□□ -0.6
EFNB1-201ENST00000204961 SMPXQ9UHP9 88 aa11.28□□□□□ -0.6
EFNB1-201ENST00000204961 TMEM190Q8WZ59 177 aa11.28□□□□□ -0.6
EFNB1-201ENST00000204961 KIR2DL4Q99706 377 aa11.28□□□□□ -0.6
EFNB1-201ENST00000204961 U3KQE9 123 aa11.28□□□□□ -0.6
EFNB1-201ENST00000204961 TRAV2A0A0B4J234 112 aa11.27□□□□□ -0.6
EFNB1-201ENST00000204961 F8W1H4 67 aa11.27□□□□□ -0.6
EFNB1-201ENST00000204961 HOXA3O43365 443 aaPredicted RBP11.27□□□□□ -0.61
EFNB1-201ENST00000204961 SPXQ9BT56 116 aa11.27□□□□□ -0.61
EFNB1-201ENST00000204961 COX8CQ7Z4L0 72 aa11.27□□□□□ -0.61
EFNB1-201ENST00000204961 C10orf105Q8TEF2 133 aa11.27□□□□□ -0.61
EFNB1-201ENST00000204961 SS18L2Q9UHA2 77 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms