RNA–Protein interactions for RNA: ENST00000193403.10

ACTN1-201, Transcript of actinin alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN1, Length 3,779 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-201ENST00000193403 RNASE13Q5GAN3 156 aaKnown RBP8.55□□□□□ -1.04
ACTN1-201ENST00000193403 ZFAND6Q6FIF0 208 aa8.55□□□□□ -1.04
ACTN1-201ENST00000193403 Q8N9W7 124 aa8.55□□□□□ -1.04
ACTN1-201ENST00000193403 LY6LH3BQJ8 138 aa8.55□□□□□ -1.04
ACTN1-201ENST00000193403 TMEM95Q3KNT9 176 aa8.55□□□□□ -1.04
ACTN1-201ENST00000193403 ERG28Q9UKR5 140 aa8.55□□□□□ -1.04
ACTN1-201ENST00000193403 C9orf139Q6ZV77 190 aa8.54□□□□□ -1.04
ACTN1-201ENST00000193403 RASL10AQ92737 203 aa8.54□□□□□ -1.04
ACTN1-201ENST00000193403 SDHAF1A6NFY7 115 aa8.54□□□□□ -1.04
ACTN1-201ENST00000193403 B5MCH6 92 aa8.54□□□□□ -1.04
ACTN1-201ENST00000193403 M0R1W7 72 aa8.54□□□□□ -1.04
ACTN1-201ENST00000193403 TCL1BO95988 128 aa8.54□□□□□ -1.04
ACTN1-201ENST00000193403 IGHV7-4-1A0A0J9YVY3 117 aa8.53□□□□□ -1.04
ACTN1-201ENST00000193403 A0A1W2PRX2 142 aa8.53□□□□□ -1.04
ACTN1-201ENST00000193403 TRBV12-3P01733 135 aa8.53□□□□□ -1.04
ACTN1-201ENST00000193403 ZFP36P26651 326 aaKnown RBP8.53□□□□□ -1.04
ACTN1-201ENST00000193403 TRPT1Q86TN4 253 aaKnown RBP8.53□□□□□ -1.04
ACTN1-201ENST00000193403 ANKRD29Q8N6D5 301 aa8.53□□□□□ -1.04
ACTN1-201ENST00000193403 CCDC140Q96MF4 163 aa8.53□□□□□ -1.04
ACTN1-201ENST00000193403 SPXQ9BT56 116 aa8.53□□□□□ -1.04
ACTN1-201ENST00000193403 TRBV7-3A0A075B6L6 115 aa8.53□□□□□ -1.04
ACTN1-201ENST00000193403 SCGB1A1P11684 91 aa8.53□□□□□ -1.04
ACTN1-201ENST00000193403 GAGE2BQ13066 116 aa8.53□□□□□ -1.04
ACTN1-201ENST00000193403 GAGE2EQ4V326 116 aa8.53□□□□□ -1.04
ACTN1-201ENST00000193403 RNF183Q96D59 192 aa8.53□□□□□ -1.04
ACTN1-201ENST00000193403 GAGE2DQ9UEU5 116 aa8.53□□□□□ -1.04
ACTN1-201ENST00000193403 PRRC2AP48634 2157 aaKnown RBP8.53□□□□□ -1.04
ACTN1-201ENST00000193403 UNQ9165/PRO28630Q6UXU0 137 aa8.53□□□□□ -1.04
ACTN1-201ENST00000193403 NTN5Q8WTR8 489 aaPredicted RBP8.53□□□□□ -1.04
ACTN1-201ENST00000193403 TMEM190Q8WZ59 177 aa8.53□□□□□ -1.04
ACTN1-201ENST00000193403 KLK9Q9UKQ9 250 aa8.53□□□□□ -1.04
ACTN1-201ENST00000193403 HELZ2Q9BYK8 2649 aaKnown RBP8.53□□□□□ -1.04
ACTN1-201ENST00000193403 SLC25A20O43772 301 aa8.52□□□□□ -1.04
ACTN1-201ENST00000193403 MORN3Q6PF18 240 aaPredicted RBP8.52□□□□□ -1.04
ACTN1-201ENST00000193403 ZMAT4Q9H898 229 aa8.52□□□□□ -1.04
ACTN1-201ENST00000193403 XGP55808 180 aa8.52□□□□□ -1.05
ACTN1-201ENST00000193403 PMVKQ15126 192 aa8.52□□□□□ -1.05
ACTN1-201ENST00000193403 PRO1854Q9UHT4 67 aa8.52□□□□□ -1.05
ACTN1-201ENST00000193403 A4D1N5 150 aa8.52□□□□□ -1.05
ACTN1-201ENST00000193403 J3QQQ9 107 aa8.52□□□□□ -1.05
ACTN1-201ENST00000193403 HIST2H2BDQ6DRA6 164 aa8.52□□□□□ -1.05
ACTN1-201ENST00000193403 Q6ZS46 218 aa8.52□□□□□ -1.05
ACTN1-201ENST00000193403 Q6ZUT4 128 aa8.52□□□□□ -1.05
ACTN1-201ENST00000193403 C20orf173Q96LM9 149 aa8.52□□□□□ -1.05
ACTN1-201ENST00000193403 RHPN1-AS1Q9BWJ2 59 aa8.52□□□□□ -1.05
ACTN1-201ENST00000193403 VCX2Q9H322 139 aa8.52□□□□□ -1.05
ACTN1-201ENST00000193403 NPFFO15130 113 aa8.51□□□□□ -1.05
ACTN1-201ENST00000193403 ID1P41134 155 aa8.51□□□□□ -1.05
ACTN1-201ENST00000193403 TOMM6Q96B49 74 aa8.51□□□□□ -1.05
ACTN1-201ENST00000193403 CSMD1Q96PZ7 3565 aa8.51□□□□□ -1.05
ACTN1-201ENST00000193403 TEN1Q86WV5 123 aa8.51□□□□□ -1.05
ACTN1-201ENST00000193403 ZFAND3Q9H8U3 227 aa8.51□□□□□ -1.05
ACTN1-201ENST00000193403 NFE4Q86UQ8 179 aa8.51□□□□□ -1.05
ACTN1-201ENST00000193403 NEXN-AS1Q8NBZ9 246 aa8.51□□□□□ -1.05
ACTN1-201ENST00000193403 NRGNQ92686 78 aa8.51□□□□□ -1.05
ACTN1-201ENST00000193403 CCL19Q99731 98 aa8.51□□□□□ -1.05
ACTN1-201ENST00000193403 SPATA25Q9BR10 227 aa8.51□□□□□ -1.05
ACTN1-201ENST00000193403 DOPEY1Q5JWR5 2465 aa8.51□□□□□ -1.05
ACTN1-201ENST00000193403 IGLV2-18A0A075B6J9 118 aa8.5□□□□□ -1.05
ACTN1-201ENST00000193403 OVOL1O14753 267 aa8.5□□□□□ -1.05
ACTN1-201ENST00000193403 CDSNQ15517 529 aa8.5□□□□□ -1.05
ACTN1-201ENST00000193403 ZNF876PQ49A33 203 aa8.5□□□□□ -1.05
ACTN1-201ENST00000193403 PAPPA-AS1Q5QFB9 102 aa8.5□□□□□ -1.05
ACTN1-201ENST00000193403 MINOS1Q5TGZ0 78 aa8.5□□□□□ -1.05
ACTN1-201ENST00000193403 ZNF625Q96I27 306 aaPredicted RBP8.5□□□□□ -1.05
ACTN1-201ENST00000193403 MINOS1-NBL1R4GNA1 71 aa8.5□□□□□ -1.05
ACTN1-201ENST00000193403 TRBV7-1A0A0A6YYK4 115 aa8.5□□□□□ -1.05
ACTN1-201ENST00000193403 VCYO14598 125 aa8.5□□□□□ -1.05
ACTN1-201ENST00000193403 PPP1R17O96001 155 aa8.5□□□□□ -1.05
ACTN1-201ENST00000193403 BLCAPP62952 87 aa8.5□□□□□ -1.05
ACTN1-201ENST00000193403 SPINK13Q1W4C9 94 aa8.5□□□□□ -1.05
ACTN1-201ENST00000193403 NDUFA11Q86Y39 141 aa8.5□□□□□ -1.05
ACTN1-201ENST00000193403 ITLN2Q8WWU7 325 aaPredicted RBP8.5□□□□□ -1.05
ACTN1-201ENST00000193403 ITPR1Q14643 2758 aa8.5□□□□□ -1.05
ACTN1-201ENST00000193403 RBAKDNA6NC62 111 aa8.5□□□□□ -1.05
ACTN1-201ENST00000193403 C3orf56Q8N813 242 aa8.5□□□□□ -1.05
ACTN1-201ENST00000193403 DYNLRB2Q8TF09 96 aa8.5□□□□□ -1.05
ACTN1-201ENST00000193403 CNFNQ9BYD5 112 aa8.5□□□□□ -1.05
ACTN1-201ENST00000193403 TRAV12-1A0A0B4J245 112 aa8.49□□□□□ -1.05
ACTN1-201ENST00000193403 CD28P10747 220 aa8.49□□□□□ -1.05
ACTN1-201ENST00000193403 CFAP126Q5VTH2 177 aa8.49□□□□□ -1.05
ACTN1-201ENST00000193403 TRAV8-4A0A0B4J246 113 aa8.49□□□□□ -1.05
ACTN1-201ENST00000193403 SUMO4Q6EEV6 95 aa8.49□□□□□ -1.05
ACTN1-201ENST00000193403 DUX3Q96PT4 197 aa8.49□□□□□ -1.05
ACTN1-201ENST00000193403 C10orf126Q8N4M7 172 aa8.48□□□□□ -1.05
ACTN1-201ENST00000193403 SVEP1Q4LDE5 3571 aa8.48□□□□□ -1.05
ACTN1-201ENST00000193403 TMEM262E9PQX1 116 aa8.48□□□□□ -1.05
ACTN1-201ENST00000193403 COX6CP09669 75 aa8.48□□□□□ -1.05
ACTN1-201ENST00000193403 C9orf47Q6ZRZ4 202 aa8.48□□□□□ -1.05
ACTN1-201ENST00000193403 PIFOQ8TCI5 191 aa8.48□□□□□ -1.05
ACTN1-201ENST00000193403 PIMREGQ9BSJ6 248 aa8.48□□□□□ -1.05
ACTN1-201ENST00000193403 IGHV3-16A0A0C4DH30 117 aa8.48□□□□□ -1.05
ACTN1-201ENST00000193403 A0A0J9YXV3 536 aa8.48□□□□□ -1.05
ACTN1-201ENST00000193403 RPL13AP40429 203 aaKnown RBP8.48□□□□□ -1.05
ACTN1-201ENST00000193403 SYNJ2BPP57105 145 aa8.48□□□□□ -1.05
ACTN1-201ENST00000193403 C2orf82Q6UX34 121 aa8.48□□□□□ -1.05
ACTN1-201ENST00000193403 ZNF48Q96MX3 618 aaPredicted RBP8.48□□□□□ -1.05
ACTN1-201ENST00000193403 CLPSL1A2RUU4 121 aa8.47□□□□□ -1.05
ACTN1-201ENST00000193403 IGHV3-53P01767 116 aa8.47□□□□□ -1.05
ACTN1-201ENST00000193403 A0A0J9YY99 117 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms