RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 SPANXN1Q5VSR9 72 aa14.46□□□□□ -0.09
TNFRSF1A-201ENST00000162749 CLUHP3Q96NS8 147 aa14.46□□□□□ -0.09
TNFRSF1A-201ENST00000162749 MCRIP2Q9BUT9 160 aaKnown RBP14.46□□□□□ -0.09
TNFRSF1A-201ENST00000162749 MAP1LC3CQ9BXW4 147 aa14.46□□□□□ -0.09
TNFRSF1A-201ENST00000162749 HSPB8Q9UJY1 196 aa14.46□□□□□ -0.09
TNFRSF1A-201ENST00000162749 NPYP01303 97 aa14.46□□□□□ -0.1
TNFRSF1A-201ENST00000162749 FAM110AQ9BQ89 295 aa14.46□□□□□ -0.1
TNFRSF1A-201ENST00000162749 ZNF747Q9BV97 191 aa14.46□□□□□ -0.1
TNFRSF1A-201ENST00000162749 C20orf202A1L168 122 aa14.45□□□□□ -0.1
TNFRSF1A-201ENST00000162749 SPRY2O43597 315 aa14.45□□□□□ -0.1
TNFRSF1A-201ENST00000162749 CKS2P33552 79 aa14.45□□□□□ -0.1
TNFRSF1A-201ENST00000162749 BATFQ16520 125 aa14.45□□□□□ -0.1
TNFRSF1A-201ENST00000162749 Q6ZN92 141 aa14.45□□□□□ -0.1
TNFRSF1A-201ENST00000162749 STHQ8IWL8 128 aa14.45□□□□□ -0.1
TNFRSF1A-201ENST00000162749 IGHV1OR15-1A0A075B7D0 117 aa14.45□□□□□ -0.1
TNFRSF1A-201ENST00000162749 GAS8-AS1O95177 125 aa14.45□□□□□ -0.1
TNFRSF1A-201ENST00000162749 NCR2O95944 276 aa14.45□□□□□ -0.1
TNFRSF1A-201ENST00000162749 CACNG7P62955 275 aa14.45□□□□□ -0.1
TNFRSF1A-201ENST00000162749 PET117Q6UWS5 81 aa14.45□□□□□ -0.1
TNFRSF1A-201ENST00000162749 C19orf73Q9NVV2 129 aa14.45□□□□□ -0.1
TNFRSF1A-201ENST00000162749 PHLDA3Q9Y5J5 127 aa14.45□□□□□ -0.1
TNFRSF1A-201ENST00000162749 TRPT1Q86TN4 253 aaKnown RBP14.44□□□□□ -0.1
TNFRSF1A-201ENST00000162749 Q8N1Y9 231 aa14.44□□□□□ -0.1
TNFRSF1A-201ENST00000162749 WFDC10AQ9H1F0 79 aa14.44□□□□□ -0.1
TNFRSF1A-201ENST00000162749 PKD1L1Q8TDX9 2849 aa14.44□□□□□ -0.1
TNFRSF1A-201ENST00000162749 EVI2AP22794 236 aa14.43□□□□□ -0.1
TNFRSF1A-201ENST00000162749 CMC4P56277 68 aaPredicted RBP14.43□□□□□ -0.1
TNFRSF1A-201ENST00000162749 M0R381 172 aa14.43□□□□□ -0.1
TNFRSF1A-201ENST00000162749 hDV102S1A0JD36 115 aa14.42□□□□□ -0.1
TNFRSF1A-201ENST00000162749 INSL3P51460 131 aa14.42□□□□□ -0.1
TNFRSF1A-201ENST00000162749 HNRNPA3P51991 378 aaKnown RBP14.42□□□□□ -0.1
TNFRSF1A-201ENST00000162749 PRIMA1Q86XR5 153 aa14.42□□□□□ -0.1
TNFRSF1A-201ENST00000162749 IGHV3-16A0A0C4DH30 117 aa14.42□□□□□ -0.1
TNFRSF1A-201ENST00000162749 H0Y8G0 127 aa14.42□□□□□ -0.1
TNFRSF1A-201ENST00000162749 LINC01545Q5VT33 79 aa14.42□□□□□ -0.1
TNFRSF1A-201ENST00000162749 COL5A1-AS1Q5SY13 56 aa14.41□□□□□ -0.1
TNFRSF1A-201ENST00000162749 MDFICQ9P1T7 246 aa14.41□□□□□ -0.1
TNFRSF1A-201ENST00000162749 C9orf66Q5T8R8 295 aa14.41□□□□□ -0.1
TNFRSF1A-201ENST00000162749 PMCHL2Q9BQD1 86 aa14.41□□□□□ -0.1
TNFRSF1A-201ENST00000162749 NXPH4O95158 308 aa14.39□□□□□ -0.11
TNFRSF1A-201ENST00000162749 ANKRD39Q53RE8 183 aa14.39□□□□□ -0.11
TNFRSF1A-201ENST00000162749 SMIM15Q7Z3B0 74 aa14.39□□□□□ -0.11
TNFRSF1A-201ENST00000162749 C9orf85Q96MD7 179 aa14.39□□□□□ -0.11
TNFRSF1A-201ENST00000162749 ST20Q9HBF5 79 aa14.39□□□□□ -0.11
TNFRSF1A-201ENST00000162749 XCL2Q9UBD3 114 aa14.39□□□□□ -0.11
TNFRSF1A-201ENST00000162749 TP73-AS1Q9UF72 201 aa14.39□□□□□ -0.11
TNFRSF1A-201ENST00000162749 LAMTOR2Q9Y2Q5 125 aa14.39□□□□□ -0.11
TNFRSF1A-201ENST00000162749 INSP01308 110 aa14.38□□□□□ -0.11
TNFRSF1A-201ENST00000162749 PPBPP02775 128 aa14.38□□□□□ -0.11
TNFRSF1A-201ENST00000162749 CBY3A6NI87 242 aa14.38□□□□□ -0.11
TNFRSF1A-201ENST00000162749 GATA1P15976 413 aaPredicted RBP14.38□□□□□ -0.11
TNFRSF1A-201ENST00000162749 MRPS16Q9Y3D3 137 aaKnown RBP14.38□□□□□ -0.11
TNFRSF1A-201ENST00000162749 HTN1P15515 57 aa14.37□□□□□ -0.11
TNFRSF1A-201ENST00000162749 TRGV11A0A075B6L2 103 aa14.37□□□□□ -0.11
TNFRSF1A-201ENST00000162749 TNFRSF6BO95407 300 aa14.37□□□□□ -0.11
TNFRSF1A-201ENST00000162749 HBDP02042 147 aa14.36□□□□□ -0.11
TNFRSF1A-201ENST00000162749 PRM2P04554 102 aa14.36□□□□□ -0.11
TNFRSF1A-201ENST00000162749 WFDC9Q8NEX5 89 aa14.36□□□□□ -0.11
TNFRSF1A-201ENST00000162749 LINC01546A6NGU7 62 aa14.35□□□□□ -0.11
TNFRSF1A-201ENST00000162749 C14orf178Q8N769 122 aaPredicted RBP14.35□□□□□ -0.11
TNFRSF1A-201ENST00000162749 MAP1LC3AQ9H492 121 aa14.35□□□□□ -0.11
TNFRSF1A-201ENST00000162749 CMYA5Q8N3K9 4069 aa14.35□□□□□ -0.11
TNFRSF1A-201ENST00000162749 STPG4Q8N801 248 aa14.35□□□□□ -0.11
TNFRSF1A-201ENST00000162749 AP1S3Q96PC3 154 aa14.35□□□□□ -0.11
TNFRSF1A-201ENST00000162749 LINC01587Q99440 93 aa14.34□□□□□ -0.11
TNFRSF1A-201ENST00000162749 NACAE9PAV3 2078 aa14.34□□□□□ -0.11
TNFRSF1A-201ENST00000162749 DPH3P1Q9H4G8 78 aa14.34□□□□□ -0.11
TNFRSF1A-201ENST00000162749 GIG44P09565 113 aaPredicted RBP14.33□□□□□ -0.12
TNFRSF1A-201ENST00000162749 DEFB125Q8N687 156 aa14.33□□□□□ -0.12
TNFRSF1A-201ENST00000162749 LINC00467Q9BRT7 94 aa14.33□□□□□ -0.12
TNFRSF1A-201ENST00000162749 TRAV26-2A0A0B4J265 109 aa14.33□□□□□ -0.12
TNFRSF1A-201ENST00000162749 HSBP1L1C9JCN9 74 aa14.33□□□□□ -0.12
TNFRSF1A-201ENST00000162749 RPL35AP18077 110 aaKnown RBP14.33□□□□□ -0.12
TNFRSF1A-201ENST00000162749 GTSCR1Q86UQ5 136 aa14.33□□□□□ -0.12
TNFRSF1A-201ENST00000162749 C1orf158Q8N1D5 194 aa14.33□□□□□ -0.12
TNFRSF1A-201ENST00000162749 NBEAL2Q6ZNJ1 2754 aa14.33□□□□□ -0.12
TNFRSF1A-201ENST00000162749 C3orf56Q8N813 242 aa14.32□□□□□ -0.12
TNFRSF1A-201ENST00000162749 JPT2Q9H910 190 aa14.32□□□□□ -0.12
TNFRSF1A-201ENST00000162749 IGLV2-18A0A075B6J9 118 aa14.31□□□□□ -0.12
TNFRSF1A-201ENST00000162749 HINT1P49773 126 aaPredicted RBP14.31□□□□□ -0.12
TNFRSF1A-201ENST00000162749 KIF25-AS1Q9Y6Z4 181 aa14.31□□□□□ -0.12
TNFRSF1A-201ENST00000162749 NRACQ8N912 160 aa14.31□□□□□ -0.12
TNFRSF1A-201ENST00000162749 NXT2Q9NPJ8 142 aaKnown RBP14.31□□□□□ -0.12
TNFRSF1A-201ENST00000162749 LGALS9BQ3B8N2 356 aa14.3□□□□□ -0.12
TNFRSF1A-201ENST00000162749 LGALS9CQ6DKI2 356 aa14.3□□□□□ -0.12
TNFRSF1A-201ENST00000162749 IFI27L1Q96BM0 104 aa14.3□□□□□ -0.12
TNFRSF1A-201ENST00000162749 ZNF876PQ49A33 203 aa14.3□□□□□ -0.12
TNFRSF1A-201ENST00000162749 C11orf72Q8NBR9 251 aa14.3□□□□□ -0.12
TNFRSF1A-201ENST00000162749 SYT8Q8NBV8 401 aa14.3□□□□□ -0.12
TNFRSF1A-201ENST00000162749 IGHV3OR16-12A0A075B7B8 117 aa14.29□□□□□ -0.12
TNFRSF1A-201ENST00000162749 WIPF1O43516 503 aa14.29□□□□□ -0.12
TNFRSF1A-201ENST00000162749 LINC00315P59091 139 aa14.29□□□□□ -0.12
TNFRSF1A-201ENST00000162749 SLC25A34Q6PIV7 304 aa14.29□□□□□ -0.12
TNFRSF1A-201ENST00000162749 FCER1GP30273 86 aa14.29□□□□□ -0.12
TNFRSF1A-201ENST00000162749 Q8N8P6 123 aa14.29□□□□□ -0.12
TNFRSF1A-201ENST00000162749 MRAP2Q96G30 205 aa14.29□□□□□ -0.12
TNFRSF1A-201ENST00000162749 PRSS47A8MTI9 375 aa14.28□□□□□ -0.12
TNFRSF1A-201ENST00000162749 ZNF415Q09FC8 603 aa14.28□□□□□ -0.12
TNFRSF1A-201ENST00000162749 A0A087WWL8 130 aa14.27□□□□□ -0.12
TNFRSF1A-201ENST00000162749 MGPP08493 103 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms