RNA–Protein interactions for RNA: ENST00000054950.3

RCN1-201, Transcript of reticulocalbin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCN1, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-201ENST00000054950 SPG11Q96JI7 2443 aa15.15■□□□□ 0.02
RCN1-201ENST00000054950 A0A0J9YY99 117 aa15.15■□□□□ 0.02
RCN1-201ENST00000054950 IGHV4-39P01824 125 aa15.15■□□□□ 0.02
RCN1-201ENST00000054950 MED14OSP0DP75 135 aa15.15■□□□□ 0.02
RCN1-201ENST00000054950 ZNRF2Q8NHG8 242 aa15.15■□□□□ 0.02
RCN1-201ENST00000054950 SORL1Q92673 2214 aa15.15■□□□□ 0.02
RCN1-201ENST00000054950 CRIP2P52943 208 aaPredicted RBP15.15■□□□□ 0.02
RCN1-201ENST00000054950 POLR2KP53803 58 aaKnown RBP15.15■□□□□ 0.02
RCN1-201ENST00000054950 FAM159AQ6UWV7 190 aa15.15■□□□□ 0.02
RCN1-201ENST00000054950 DLX4Q92988 240 aaPredicted RBP15.15■□□□□ 0.02
RCN1-201ENST00000054950 ZNF256Q9Y2P7 627 aaPredicted RBP15.15■□□□□ 0.02
RCN1-201ENST00000054950 TMEM95Q3KNT9 176 aa15.14■□□□□ 0.01
RCN1-201ENST00000054950 TRAV12-2A0A075B6T6 113 aa15.14■□□□□ 0.01
RCN1-201ENST00000054950 TMEM238LA0A1B0GVL6 79 aa15.14■□□□□ 0.01
RCN1-201ENST00000054950 SDHAF1A6NFY7 115 aa15.14■□□□□ 0.01
RCN1-201ENST00000054950 A6NJY4 79 aa15.14■□□□□ 0.01
RCN1-201ENST00000054950 LY6DQ14210 128 aa15.14■□□□□ 0.01
RCN1-201ENST00000054950 IGHV4-61A0A0C4DH41 118 aa15.13■□□□□ 0.01
RCN1-201ENST00000054950 NXPH4O95158 308 aa15.13■□□□□ 0.01
RCN1-201ENST00000054950 PMVKQ15126 192 aa15.13■□□□□ 0.01
RCN1-201ENST00000054950 POM121L12Q8N7R1 296 aa15.13■□□□□ 0.01
RCN1-201ENST00000054950 ATP6V0BQ99437 205 aa15.13■□□□□ 0.01
RCN1-201ENST00000054950 CSMD2Q7Z408 3487 aa15.13■□□□□ 0.01
RCN1-201ENST00000054950 FOXI1Q12951 378 aa15.13■□□□□ 0.01
RCN1-201ENST00000054950 KLLNB2CW77 178 aa15.12■□□□□ 0.01
RCN1-201ENST00000054950 FHL3Q13643 280 aa15.12■□□□□ 0.01
RCN1-201ENST00000054950 NDUFA11Q86Y39 141 aa15.12■□□□□ 0.01
RCN1-201ENST00000054950 C1QTNF4Q9BXJ3 329 aa15.12■□□□□ 0.01
RCN1-201ENST00000054950 CSPG4Q6UVK1 2322 aa15.11■□□□□ 0.01
RCN1-201ENST00000054950 IGHV4OR15-8A0A075B7B6 117 aa15.11■□□□□ 0.01
RCN1-201ENST00000054950 A0A087WW49 117 aa15.11■□□□□ 0.01
RCN1-201ENST00000054950 SYT8Q8NBV8 401 aa15.11■□□□□ 0.01
RCN1-201ENST00000054950 KIR2DL4Q99706 377 aa15.11■□□□□ 0.01
RCN1-201ENST00000054950 MDFICQ9P1T7 246 aa15.11■□□□□ 0.01
RCN1-201ENST00000054950 IGHV3-64A0A075B6Q5 118 aa15.11■□□□□ 0.01
RCN1-201ENST00000054950 PPP1R17O96001 155 aa15.11■□□□□ 0.01
RCN1-201ENST00000054950 IGHG2P01859 326 aa15.11■□□□□ 0.01
RCN1-201ENST00000054950 DAZ1Q9NQZ3 744 aaKnown RBP15.11■□□□□ 0.01
RCN1-201ENST00000054950 HERVK_113P61574 105 aa15.1■□□□□ 0.01
RCN1-201ENST00000054950 TCL1BO95988 128 aa15.1■□□□□ 0.01
RCN1-201ENST00000054950 CFC1BP0CG36 223 aa15.1■□□□□ 0.01
RCN1-201ENST00000054950 CFC1P0CG37 223 aa15.1■□□□□ 0.01
RCN1-201ENST00000054950 UBE2D3P61077 147 aa15.1■□□□□ 0.01
RCN1-201ENST00000054950 UBE2D2P62837 147 aa15.1■□□□□ 0.01
RCN1-201ENST00000054950 USMG5Q96IX5 58 aa15.1■□□□□ 0.01
RCN1-201ENST00000054950 ITPR1Q14643 2758 aa15.1■□□□□ 0.01
RCN1-201ENST00000054950 IGHV3-30P01768 117 aa15.09■□□□□ 0.01
RCN1-201ENST00000054950 ZNF688P0C7X2 276 aa15.09■□□□□ 0.01
RCN1-201ENST00000054950 IGHV3-30-5P0DP03 117 aa15.09■□□□□ 0.01
RCN1-201ENST00000054950 VCYO14598 125 aa15.09■□□□□ 0.01
RCN1-201ENST00000054950 SCGB1A1P11684 91 aa15.08■□□□□ 0
RCN1-201ENST00000054950 ZNF56Q15929 161 aa15.08■□□□□ 0
RCN1-201ENST00000054950 C10orf99Q6UWK7 81 aa15.08■□□□□ 0
RCN1-201ENST00000054950 DCANP1Q8TF63 244 aa15.08■□□□□ 0
RCN1-201ENST00000054950 DOPEY2Q9Y3R5 2298 aa15.08■□□□□ 0
RCN1-201ENST00000054950 AMELXQ99217 191 aa15.08■□□□□ 0
RCN1-201ENST00000054950 CDIP1Q9H305 208 aa15.07■□□□□ 0
RCN1-201ENST00000054950 ZNF876PQ49A33 203 aa15.07■□□□□ 0
RCN1-201ENST00000054950 A6NDX4 124 aa15.06■□□□□ 0
RCN1-201ENST00000054950 CARD19Q96LW7 228 aa15.06■□□□□ 0
RCN1-201ENST00000054950 ZNF580Q9UK33 172 aa15.06■□□□□ 0
RCN1-201ENST00000054950 CIDEAO60543 219 aa15.06■□□□□ 0
RCN1-201ENST00000054950 TIMM17AQ99595 171 aa15.06■□□□□ 0
RCN1-201ENST00000054950 J3QQQ9 107 aa15.05■□□□□ 0
RCN1-201ENST00000054950 SLC25A29Q8N8R3 303 aa15.05■□□□□ 0
RCN1-201ENST00000054950 TMEM141Q96I45 108 aa15.05■□□□□ -0
RCN1-201ENST00000054950 EIF4EBP3O60516 100 aaPredicted RBP15.04■□□□□ -0
RCN1-201ENST00000054950 RPL32P62910 135 aaKnown RBP15.04■□□□□ -0
RCN1-201ENST00000054950 PAPPA-AS1Q5QFB9 102 aa15.04■□□□□ -0
RCN1-201ENST00000054950 RAX2Q96IS3 184 aa15.04■□□□□ -0
RCN1-201ENST00000054950 IGHV3-16A0A0C4DH30 117 aa15.04■□□□□ -0
RCN1-201ENST00000054950 TRBV7-9A0A0J9YWB2 115 aa15.04■□□□□ -0
RCN1-201ENST00000054950 TRBV27A0A0K0K1C4 114 aa15.04■□□□□ -0
RCN1-201ENST00000054950 LGALS9O00182 355 aa15.04■□□□□ -0
RCN1-201ENST00000054950 IGLV1-40P01703 118 aa15.04■□□□□ -0
RCN1-201ENST00000054950 Q8N1Y9 231 aa15.04■□□□□ -0
RCN1-201ENST00000054950 H7C2G1 150 aa15.03■□□□□ -0
RCN1-201ENST00000054950 UCNP55089 124 aa15.03■□□□□ -0
RCN1-201ENST00000054950 SPINK13Q1W4C9 94 aa15.03■□□□□ -0
RCN1-201ENST00000054950 MT-ATP8P03928 68 aa15.03■□□□□ -0
RCN1-201ENST00000054950 P0DMU3 169 aa15.03■□□□□ -0
RCN1-201ENST00000054950 FAM231AP0DMU4 169 aa15.03■□□□□ -0
RCN1-201ENST00000054950 FAM231CP0DMU5 169 aa15.03■□□□□ -0
RCN1-201ENST00000054950 LGALS3P17931 250 aaKnown RBP15.03■□□□□ -0
RCN1-201ENST00000054950 H3BUA1 57 aa15.02■□□□□ -0
RCN1-201ENST00000054950 M0QY20 66 aa15.02■□□□□ -0
RCN1-201ENST00000054950 SCGB1C2P0DMR2 95 aa15.02□□□□□ -0.01
RCN1-201ENST00000054950 ID1P41134 155 aa15.02□□□□□ -0.01
RCN1-201ENST00000054950 C10orf126Q8N4M7 172 aa15.02□□□□□ -0.01
RCN1-201ENST00000054950 C9orf85Q96MD7 179 aa15.01□□□□□ -0.01
RCN1-201ENST00000054950 A4D1N5 150 aa15.01□□□□□ -0.01
RCN1-201ENST00000054950 AVPP01185 164 aa15.01□□□□□ -0.01
RCN1-201ENST00000054950 ATP6V0E2Q8NHE4 81 aa15.01□□□□□ -0.01
RCN1-201ENST00000054950 TRAV2A0A0B4J234 112 aa15□□□□□ -0.01
RCN1-201ENST00000054950 IGHV4-30-2A0A087WSY4 118 aa15□□□□□ -0.01
RCN1-201ENST00000054950 XGP55808 180 aa15□□□□□ -0.01
RCN1-201ENST00000054950 CKS1BP61024 79 aa15□□□□□ -0.01
RCN1-201ENST00000054950 PIMREGQ9BSJ6 248 aa15□□□□□ -0.01
RCN1-201ENST00000054950 PRO1854Q9UHT4 67 aa15□□□□□ -0.01
RCN1-201ENST00000054950 A0A0J9YXV3 536 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms