RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 TRPT1Q86TN4 253 aaKnown RBP10.5□□□□□ -0.73
RTFDC1-201ENST00000023939 SORL1Q92673 2214 aa10.49□□□□□ -0.73
RTFDC1-201ENST00000023939 CBY3A6NI87 242 aa10.49□□□□□ -0.73
RTFDC1-201ENST00000023939 INSP01308 110 aa10.49□□□□□ -0.73
RTFDC1-201ENST00000023939 MGPP08493 103 aa10.49□□□□□ -0.73
RTFDC1-201ENST00000023939 DEFA6Q01524 100 aa10.49□□□□□ -0.73
RTFDC1-201ENST00000023939 BEAN1Q3B7T3 259 aa10.49□□□□□ -0.73
RTFDC1-201ENST00000023939 STHQ8IWL8 128 aa10.48□□□□□ -0.73
RTFDC1-201ENST00000023939 MIEN1Q9BRT3 115 aa10.48□□□□□ -0.73
RTFDC1-201ENST00000023939 OTOGQ6ZRI0 2925 aa10.48□□□□□ -0.73
RTFDC1-201ENST00000023939 LAGE3Q14657 143 aa10.47□□□□□ -0.73
RTFDC1-201ENST00000023939 SPATA45Q537H7 98 aa10.47□□□□□ -0.73
RTFDC1-201ENST00000023939 LINC00482Q8N8I6 264 aa10.47□□□□□ -0.73
RTFDC1-201ENST00000023939 IFI27L1Q96BM0 104 aa10.47□□□□□ -0.73
RTFDC1-201ENST00000023939 CRYGDP07320 174 aa10.47□□□□□ -0.73
RTFDC1-201ENST00000023939 C14orf144Q96I85 54 aa10.47□□□□□ -0.73
RTFDC1-201ENST00000023939 JPT2Q9H910 190 aa10.47□□□□□ -0.73
RTFDC1-201ENST00000023939 TRBV6-5A0A0K0K1A5 114 aa10.46□□□□□ -0.74
RTFDC1-201ENST00000023939 CTAG1AP78358 180 aa10.46□□□□□ -0.74
RTFDC1-201ENST00000023939 ZNF415Q09FC8 603 aa10.46□□□□□ -0.74
RTFDC1-201ENST00000023939 LGALS9BQ3B8N2 356 aa10.46□□□□□ -0.74
RTFDC1-201ENST00000023939 ZNF876PQ49A33 203 aa10.46□□□□□ -0.74
RTFDC1-201ENST00000023939 LGALS9CQ6DKI2 356 aa10.46□□□□□ -0.74
RTFDC1-201ENST00000023939 SUMO4Q6EEV6 95 aa10.46□□□□□ -0.74
RTFDC1-201ENST00000023939 ZNF705AQ6ZN79 300 aaPredicted RBP10.46□□□□□ -0.74
RTFDC1-201ENST00000023939 ATOH7Q8N100 152 aa10.46□□□□□ -0.74
RTFDC1-201ENST00000023939 RPL39LQ96EH5 51 aaKnown RBP10.46□□□□□ -0.74
RTFDC1-201ENST00000023939 C19orf73Q9NVV2 129 aa10.46□□□□□ -0.74
RTFDC1-201ENST00000023939 NUTF2P61970 127 aaKnown RBP10.45□□□□□ -0.74
RTFDC1-201ENST00000023939 ORMDL2Q53FV1 153 aa10.45□□□□□ -0.74
RTFDC1-201ENST00000023939 TMEM158Q8WZ71 300 aa10.45□□□□□ -0.74
RTFDC1-201ENST00000023939 A0A087WWL8 130 aa10.44□□□□□ -0.74
RTFDC1-201ENST00000023939 M0R2P5 195 aa10.44□□□□□ -0.74
RTFDC1-201ENST00000023939 PF4P02776 101 aa10.44□□□□□ -0.74
RTFDC1-201ENST00000023939 IGLC3P0DOY3 106 aa10.44□□□□□ -0.74
RTFDC1-201ENST00000023939 C11orf72Q8NBR9 251 aa10.44□□□□□ -0.74
RTFDC1-201ENST00000023939 LINC01587Q99440 93 aa10.44□□□□□ -0.74
RTFDC1-201ENST00000023939 SPXQ9BT56 116 aa10.44□□□□□ -0.74
RTFDC1-201ENST00000023939 EDA2RQ9HAV5 297 aa10.44□□□□□ -0.74
RTFDC1-201ENST00000023939 ATP5LO75964 103 aa10.44□□□□□ -0.74
RTFDC1-201ENST00000023939 POLR2KP53803 58 aaKnown RBP10.44□□□□□ -0.74
RTFDC1-201ENST00000023939 ST20Q9HBF5 79 aa10.44□□□□□ -0.74
RTFDC1-201ENST00000023939 FN1P02751 2386 aaKnown RBP10.44□□□□□ -0.74
RTFDC1-201ENST00000023939 NF1P21359 2839 aa10.43□□□□□ -0.74
RTFDC1-201ENST00000023939 M0QY20 66 aa10.43□□□□□ -0.74
RTFDC1-201ENST00000023939 TCAPO15273 167 aa10.43□□□□□ -0.74
RTFDC1-201ENST00000023939 IGLL1P15814 213 aa10.43□□□□□ -0.74
RTFDC1-201ENST00000023939 MAJINQ3KP22 176 aa10.43□□□□□ -0.74
RTFDC1-201ENST00000023939 MRPL52Q86TS9 123 aaKnown RBP10.43□□□□□ -0.74
RTFDC1-201ENST00000023939 C1orf158Q8N1D5 194 aa10.43□□□□□ -0.74
RTFDC1-201ENST00000023939 UQCR10Q9UDW1 63 aa10.43□□□□□ -0.74
RTFDC1-201ENST00000023939 A8MWV9 139 aa10.42□□□□□ -0.74
RTFDC1-201ENST00000023939 F5H697 171 aa10.42□□□□□ -0.74
RTFDC1-201ENST00000023939 CSTL1Q9H114 145 aa10.42□□□□□ -0.74
RTFDC1-201ENST00000023939 XCL2Q9UBD3 114 aa10.42□□□□□ -0.74
RTFDC1-201ENST00000023939 CUBNO60494 3623 aa10.42□□□□□ -0.74
RTFDC1-201ENST00000023939 VCYO14598 125 aa10.41□□□□□ -0.74
RTFDC1-201ENST00000023939 INSL3P51460 131 aa10.41□□□□□ -0.74
RTFDC1-201ENST00000023939 LINC01549A6NIU2 74 aa10.41□□□□□ -0.74
RTFDC1-201ENST00000023939 HSBP1L1C9JCN9 74 aa10.41□□□□□ -0.74
RTFDC1-201ENST00000023939 H0Y8G0 127 aa10.41□□□□□ -0.74
RTFDC1-201ENST00000023939 NUDT3O95989 172 aa10.41□□□□□ -0.74
RTFDC1-201ENST00000023939 HTN1P15515 57 aa10.41□□□□□ -0.74
RTFDC1-201ENST00000023939 G0S2P27469 103 aa10.41□□□□□ -0.74
RTFDC1-201ENST00000023939 FAM74A4Q5TZK3 123 aa10.41□□□□□ -0.74
RTFDC1-201ENST00000023939 UFSP1Q6NVU6 142 aa10.41□□□□□ -0.74
RTFDC1-201ENST00000023939 TOMM6Q96B49 74 aa10.41□□□□□ -0.74
RTFDC1-201ENST00000023939 CITED1Q99966 193 aa10.41□□□□□ -0.74
RTFDC1-201ENST00000023939 MCRIP2Q9BUT9 160 aaKnown RBP10.41□□□□□ -0.74
RTFDC1-201ENST00000023939 GOLT1BQ9Y3E0 138 aa10.41□□□□□ -0.74
RTFDC1-201ENST00000023939 WNK1Q9H4A3 2382 aa10.4□□□□□ -0.74
RTFDC1-201ENST00000023939 NSD1Q96L73 2696 aaPredicted RBP10.4□□□□□ -0.74
RTFDC1-201ENST00000023939 TRBV27A0A0K0K1C4 114 aa10.4□□□□□ -0.74
RTFDC1-201ENST00000023939 ZNF56Q15929 161 aa10.4□□□□□ -0.74
RTFDC1-201ENST00000023939 MORN3Q6PF18 240 aaPredicted RBP10.4□□□□□ -0.74
RTFDC1-201ENST00000023939 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.4□□□□□ -0.74
RTFDC1-201ENST00000023939 IL17DQ8TAD2 202 aa10.4□□□□□ -0.74
RTFDC1-201ENST00000023939 H7C1H1 209 aa10.39□□□□□ -0.75
RTFDC1-201ENST00000023939 GIG44P09565 113 aaPredicted RBP10.39□□□□□ -0.75
RTFDC1-201ENST00000023939 LBHQ53QV2 105 aaPredicted RBP10.39□□□□□ -0.75
RTFDC1-201ENST00000023939 C18orf15Q96N68 181 aa10.39□□□□□ -0.75
RTFDC1-201ENST00000023939 PMCHL2Q9BQD1 86 aa10.39□□□□□ -0.75
RTFDC1-201ENST00000023939 hDV102S1A0JD36 115 aa10.38□□□□□ -0.75
RTFDC1-201ENST00000023939 TMEM208Q9BTX3 173 aa10.38□□□□□ -0.75
RTFDC1-201ENST00000023939 C1QTNF4Q9BXJ3 329 aa10.38□□□□□ -0.75
RTFDC1-201ENST00000023939 ZMAT4Q9H898 229 aa10.38□□□□□ -0.75
RTFDC1-201ENST00000023939 SDHAF1A6NFY7 115 aa10.38□□□□□ -0.75
RTFDC1-201ENST00000023939 RHODO00212 210 aa10.38□□□□□ -0.75
RTFDC1-201ENST00000023939 PRM2P04554 102 aa10.38□□□□□ -0.75
RTFDC1-201ENST00000023939 ODF1Q14990 250 aa10.38□□□□□ -0.75
RTFDC1-201ENST00000023939 KIR2DL4Q99706 377 aa10.38□□□□□ -0.75
RTFDC1-201ENST00000023939 C2CD3Q4AC94 2353 aa10.38□□□□□ -0.75
RTFDC1-201ENST00000023939 HIVEP1P15822 2718 aa10.38□□□□□ -0.75
RTFDC1-201ENST00000023939 C9orf66Q5T8R8 295 aa10.37□□□□□ -0.75
RTFDC1-201ENST00000023939 RNASE8Q8TDE3 154 aaKnown RBP10.37□□□□□ -0.75
RTFDC1-201ENST00000023939 SETD2Q9BYW2 2564 aaPredicted RBP10.36□□□□□ -0.75
RTFDC1-201ENST00000023939 TRAV12-1A0A0B4J245 112 aa10.36□□□□□ -0.75
RTFDC1-201ENST00000023939 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.36□□□□□ -0.75
RTFDC1-201ENST00000023939 RS1O15537 224 aa10.36□□□□□ -0.75
RTFDC1-201ENST00000023939 PRSS1P07477 247 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms