RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 FMC1Q96HJ9 113 aa10.49□□□□□ -0.73
ERCC1-201ENST00000013807 DAZ3Q9NR90 486 aaKnown RBP10.49□□□□□ -0.73
ERCC1-201ENST00000013807 H3BVH4 76 aa10.48□□□□□ -0.73
ERCC1-201ENST00000013807 AKR1C8PQ5T2L2 129 aa10.48□□□□□ -0.73
ERCC1-201ENST00000013807 FAM162BQ5T6X4 162 aa10.48□□□□□ -0.73
ERCC1-201ENST00000013807 NIT1Q86X76 327 aa10.48□□□□□ -0.73
ERCC1-201ENST00000013807 CHCHD7Q9BUK0 85 aa10.48□□□□□ -0.73
ERCC1-201ENST00000013807 CYTL1Q9NRR1 136 aa10.48□□□□□ -0.73
ERCC1-201ENST00000013807 FXYD6-FXYD2A0A087WZ82 144 aa10.47□□□□□ -0.73
ERCC1-201ENST00000013807 TRBV10-1A0A0K0K1A3 114 aa10.47□□□□□ -0.73
ERCC1-201ENST00000013807 SH2D1AO60880 128 aa10.47□□□□□ -0.73
ERCC1-201ENST00000013807 LTAP01374 205 aa10.47□□□□□ -0.73
ERCC1-201ENST00000013807 SEC11BP0C7V7 166 aa10.47□□□□□ -0.73
ERCC1-201ENST00000013807 OR11H4Q8NGC9 324 aa10.47□□□□□ -0.73
ERCC1-201ENST00000013807 HAMPP81172 84 aa10.46□□□□□ -0.73
ERCC1-201ENST00000013807 ATRAIDQ6UW56 229 aa10.46□□□□□ -0.73
ERCC1-201ENST00000013807 PHLDA3Q9Y5J5 127 aa10.46□□□□□ -0.73
ERCC1-201ENST00000013807 MAP1LC3B2A6NCE7 125 aa10.45□□□□□ -0.74
ERCC1-201ENST00000013807 M0R036 132 aa10.45□□□□□ -0.74
ERCC1-201ENST00000013807 RMI2Q96E14 147 aa10.45□□□□□ -0.74
ERCC1-201ENST00000013807 MAP1LC3BQ9GZQ8 125 aa10.45□□□□□ -0.74
ERCC1-201ENST00000013807 GRIFINA4D1Z8 144 aa10.44□□□□□ -0.74
ERCC1-201ENST00000013807 TPT1P13693 172 aaKnown RBP10.44□□□□□ -0.74
ERCC1-201ENST00000013807 UBE2G1P62253 170 aa10.44□□□□□ -0.74
ERCC1-201ENST00000013807 ZFP82Q8N141 532 aa10.44□□□□□ -0.74
ERCC1-201ENST00000013807 Q8N976 141 aa10.44□□□□□ -0.74
ERCC1-201ENST00000013807 OR10G8Q8NGN5 311 aa10.44□□□□□ -0.74
ERCC1-201ENST00000013807 TRBV7-3A0A075B6L6 115 aa10.43□□□□□ -0.74
ERCC1-201ENST00000013807 CXCL1P09341 107 aa10.43□□□□□ -0.74
ERCC1-201ENST00000013807 UBE2D3P61077 147 aa10.43□□□□□ -0.74
ERCC1-201ENST00000013807 UBE2D2P62837 147 aa10.43□□□□□ -0.74
ERCC1-201ENST00000013807 ELOBQ15370 118 aa10.43□□□□□ -0.74
ERCC1-201ENST00000013807 FAM74A4Q5TZK3 123 aa10.43□□□□□ -0.74
ERCC1-201ENST00000013807 STOML3Q8TAV4 291 aa10.43□□□□□ -0.74
ERCC1-201ENST00000013807 URGCP-MRPS24S4R325 110 aa10.43□□□□□ -0.74
ERCC1-201ENST00000013807 A0A087WWL8 130 aa10.42□□□□□ -0.74
ERCC1-201ENST00000013807 M0R381 172 aa10.42□□□□□ -0.74
ERCC1-201ENST00000013807 S100A9P06702 114 aaKnown RBP10.42□□□□□ -0.74
ERCC1-201ENST00000013807 RPL36AP83881 106 aaKnown RBP10.42□□□□□ -0.74
ERCC1-201ENST00000013807 MBD3L1Q8WWY6 194 aa10.42□□□□□ -0.74
ERCC1-201ENST00000013807 BAALCQ8WXS3 180 aa10.42□□□□□ -0.74
ERCC1-201ENST00000013807 RPL36ALQ969Q0 106 aaKnown RBP10.42□□□□□ -0.74
ERCC1-201ENST00000013807 MLST8Q9BVC4 326 aa10.42□□□□□ -0.74
ERCC1-201ENST00000013807 SSBP4Q9BWG4 385 aaPredicted RBP10.42□□□□□ -0.74
ERCC1-201ENST00000013807 LECT2O14960 151 aa10.41□□□□□ -0.74
ERCC1-201ENST00000013807 ARPC5O15511 151 aa10.41□□□□□ -0.74
ERCC1-201ENST00000013807 PLA2G1BP04054 148 aaKnown RBP10.41□□□□□ -0.74
ERCC1-201ENST00000013807 RAB4BP61018 213 aa10.41□□□□□ -0.74
ERCC1-201ENST00000013807 PRR27Q6MZM9 219 aa10.41□□□□□ -0.74
ERCC1-201ENST00000013807 KLK12Q9UKR0 248 aa10.41□□□□□ -0.74
ERCC1-201ENST00000013807 Q0VG73 95 aa10.4□□□□□ -0.74
ERCC1-201ENST00000013807 ZNF345Q14585 488 aa10.4□□□□□ -0.74
ERCC1-201ENST00000013807 CST9LP1Q5W188 147 aa10.4□□□□□ -0.74
ERCC1-201ENST00000013807 DNAJC30Q96LL9 226 aa10.4□□□□□ -0.74
ERCC1-201ENST00000013807 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.39□□□□□ -0.75
ERCC1-201ENST00000013807 A0A087WX48 190 aa10.39□□□□□ -0.75
ERCC1-201ENST00000013807 UMAD1C9J7I0 102 aa10.39□□□□□ -0.75
ERCC1-201ENST00000013807 SNAI2O43623 268 aa10.39□□□□□ -0.75
ERCC1-201ENST00000013807 PAGE4O60829 102 aa10.39□□□□□ -0.75
ERCC1-201ENST00000013807 AKR1C3P42330 323 aa10.39□□□□□ -0.75
ERCC1-201ENST00000013807 KCNRGQ8N5I3 272 aa10.39□□□□□ -0.75
ERCC1-201ENST00000013807 IGKV2D-24A0A075B6R9 120 aa10.38□□□□□ -0.75
ERCC1-201ENST00000013807 TMSB15BA0A087X1C1 80 aa10.38□□□□□ -0.75
ERCC1-201ENST00000013807 TRBV6-8A0A0A6YYG3 113 aa10.38□□□□□ -0.75
ERCC1-201ENST00000013807 KRTAP29-1A8MX34 341 aaPredicted RBP10.38□□□□□ -0.75
ERCC1-201ENST00000013807 OR5AL1P0C617 328 aa10.38□□□□□ -0.75
ERCC1-201ENST00000013807 LINC00528Q8N1L1 170 aa10.38□□□□□ -0.75
ERCC1-201ENST00000013807 RBFOX3A6NFN3 312 aa10.37□□□□□ -0.75
ERCC1-201ENST00000013807 HMSDA8MTL9 139 aa10.37□□□□□ -0.75
ERCC1-201ENST00000013807 RGS21Q2M5E4 152 aa10.37□□□□□ -0.75
ERCC1-201ENST00000013807 SCXQ7RTU7 201 aa10.37□□□□□ -0.75
ERCC1-201ENST00000013807 DEFB104AQ8WTQ1 72 aa10.37□□□□□ -0.75
ERCC1-201ENST00000013807 UBE2WQ96B02 151 aa10.37□□□□□ -0.75
ERCC1-201ENST00000013807 CHAC1Q9BUX1 264 aa10.37□□□□□ -0.75
ERCC1-201ENST00000013807 KRTAP10-4P60372 401 aaPredicted RBP10.36□□□□□ -0.75
ERCC1-201ENST00000013807 KCNIP4Q6PIL6 250 aa10.36□□□□□ -0.75
ERCC1-201ENST00000013807 ENHOQ6UWT2 76 aa10.36□□□□□ -0.75
ERCC1-201ENST00000013807 NEXN-AS1Q8NBZ9 246 aa10.36□□□□□ -0.75
ERCC1-201ENST00000013807 OR10AG1Q8NH19 301 aa10.36□□□□□ -0.75
ERCC1-201ENST00000013807 SFT2D1Q8WV19 159 aa10.36□□□□□ -0.75
ERCC1-201ENST00000013807 ZNF471Q9BX82 626 aaPredicted RBP10.36□□□□□ -0.75
ERCC1-201ENST00000013807 VAX2Q9UIW0 290 aa10.36□□□□□ -0.75
ERCC1-201ENST00000013807 C14orf177Q52M58 125 aa10.35□□□□□ -0.75
ERCC1-201ENST00000013807 BAGE2Q86Y30 109 aa10.35□□□□□ -0.75
ERCC1-201ENST00000013807 KIF25-AS1Q9Y6Z4 181 aa10.35□□□□□ -0.75
ERCC1-201ENST00000013807 PKIAP61925 76 aa10.34□□□□□ -0.75
ERCC1-201ENST00000013807 RPL19P84098 196 aaKnown RBP10.34□□□□□ -0.75
ERCC1-201ENST00000013807 LINC01620Q4KN68 170 aa10.34□□□□□ -0.75
ERCC1-201ENST00000013807 TMUB2Q71RG4 321 aa10.34□□□□□ -0.75
ERCC1-201ENST00000013807 A0A0D9SG52 128 aa10.33□□□□□ -0.76
ERCC1-201ENST00000013807 SCO2A0A1W2PP80 73 aa10.33□□□□□ -0.76
ERCC1-201ENST00000013807 J3QL48 77 aa10.33□□□□□ -0.76
ERCC1-201ENST00000013807 ZNF56Q15929 161 aa10.33□□□□□ -0.76
ERCC1-201ENST00000013807 MPV17L2Q567V2 206 aa10.33□□□□□ -0.76
ERCC1-201ENST00000013807 TMEM97Q5BJF2 176 aa10.33□□□□□ -0.76
ERCC1-201ENST00000013807 FAM213BQ8TBF2 198 aa10.33□□□□□ -0.76
ERCC1-201ENST00000013807 CIRBP-AS1Q8TBR5 109 aa10.33□□□□□ -0.76
ERCC1-201ENST00000013807 C1orf43Q9BWL3 253 aa10.33□□□□□ -0.76
ERCC1-201ENST00000013807 TMEM262E9PQX1 116 aa10.32□□□□□ -0.76
ERCC1-201ENST00000013807 SMLR1H3BR10 107 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms