RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 IGHV3-64A0A075B6Q5 118 aa10.5□□□□□ -0.73
USH1C-201ENST00000005226 TRAV12-2A0A075B6T6 113 aa10.5□□□□□ -0.73
USH1C-201ENST00000005226 A0A0J9YY99 117 aa10.5□□□□□ -0.73
USH1C-201ENST00000005226 UBE2D1P51668 147 aa10.5□□□□□ -0.73
USH1C-201ENST00000005226 CFAP126Q5VTH2 177 aa10.5□□□□□ -0.73
USH1C-201ENST00000005226 H3BUX3 64 aa10.49□□□□□ -0.73
USH1C-201ENST00000005226 FOXI1Q12951 378 aa10.49□□□□□ -0.73
USH1C-201ENST00000005226 SYT8Q8NBV8 401 aa10.49□□□□□ -0.73
USH1C-201ENST00000005226 DLX4Q92988 240 aaPredicted RBP10.49□□□□□ -0.73
USH1C-201ENST00000005226 IGHV1-69DA0A0B4J2H0 117 aa10.49□□□□□ -0.73
USH1C-201ENST00000005226 IGHV1-69P01742 117 aa10.49□□□□□ -0.73
USH1C-201ENST00000005226 TMEM95Q3KNT9 176 aa10.49□□□□□ -0.73
USH1C-201ENST00000005226 FAM159AQ6UWV7 190 aa10.49□□□□□ -0.73
USH1C-201ENST00000005226 SDHAF1A6NFY7 115 aa10.49□□□□□ -0.73
USH1C-201ENST00000005226 POLR2KP53803 58 aaKnown RBP10.49□□□□□ -0.73
USH1C-201ENST00000005226 FHL3Q13643 280 aa10.49□□□□□ -0.73
USH1C-201ENST00000005226 LY6DQ14210 128 aa10.49□□□□□ -0.73
USH1C-201ENST00000005226 PMVKQ15126 192 aa10.48□□□□□ -0.73
USH1C-201ENST00000005226 NDUFA11Q86Y39 141 aa10.48□□□□□ -0.73
USH1C-201ENST00000005226 MDFICQ9P1T7 246 aa10.48□□□□□ -0.73
USH1C-201ENST00000005226 CREBBPQ92793 2442 aa10.48□□□□□ -0.73
USH1C-201ENST00000005226 IGHV4-39P01824 125 aa10.48□□□□□ -0.73
USH1C-201ENST00000005226 CFC1BP0CG36 223 aa10.48□□□□□ -0.73
USH1C-201ENST00000005226 CFC1P0CG37 223 aa10.48□□□□□ -0.73
USH1C-201ENST00000005226 IGHV4-61A0A0C4DH41 118 aa10.47□□□□□ -0.73
USH1C-201ENST00000005226 TMEM238LA0A1B0GVL6 79 aa10.47□□□□□ -0.73
USH1C-201ENST00000005226 A6NJY4 79 aa10.47□□□□□ -0.73
USH1C-201ENST00000005226 CIDEAO60543 219 aa10.47□□□□□ -0.73
USH1C-201ENST00000005226 TCL1BO95988 128 aa10.47□□□□□ -0.73
USH1C-201ENST00000005226 C1QTNF4Q9BXJ3 329 aa10.47□□□□□ -0.73
USH1C-201ENST00000005226 H7C2G1 150 aa10.46□□□□□ -0.73
USH1C-201ENST00000005226 ZNF688P0C7X2 276 aa10.46□□□□□ -0.73
USH1C-201ENST00000005226 C10orf99Q6UWK7 81 aa10.46□□□□□ -0.73
USH1C-201ENST00000005226 CARD19Q96LW7 228 aa10.46□□□□□ -0.73
USH1C-201ENST00000005226 KIR2DL4Q99706 377 aa10.46□□□□□ -0.73
USH1C-201ENST00000005226 CDIP1Q9H305 208 aa10.46□□□□□ -0.73
USH1C-201ENST00000005226 VCYO14598 125 aa10.46□□□□□ -0.74
USH1C-201ENST00000005226 RAX2Q96IS3 184 aa10.46□□□□□ -0.74
USH1C-201ENST00000005226 IGHV4OR15-8A0A075B7B6 117 aa10.45□□□□□ -0.74
USH1C-201ENST00000005226 A0A087WW49 117 aa10.45□□□□□ -0.74
USH1C-201ENST00000005226 IGHV3-30P01768 117 aa10.45□□□□□ -0.74
USH1C-201ENST00000005226 IGHV3-30-5P0DP03 117 aa10.45□□□□□ -0.74
USH1C-201ENST00000005226 MED14OSP0DP75 135 aa10.45□□□□□ -0.74
USH1C-201ENST00000005226 HERVK_113P61574 105 aa10.45□□□□□ -0.74
USH1C-201ENST00000005226 APRG1Q8IVJ8 170 aa10.45□□□□□ -0.74
USH1C-201ENST00000005226 ATP6V0BQ99437 205 aa10.45□□□□□ -0.74
USH1C-201ENST00000005226 ZNF580Q9UK33 172 aa10.45□□□□□ -0.74
USH1C-201ENST00000005226 KLLNB2CW77 178 aa10.45□□□□□ -0.74
USH1C-201ENST00000005226 UBE2D3P61077 147 aa10.45□□□□□ -0.74
USH1C-201ENST00000005226 UBE2D2P62837 147 aa10.45□□□□□ -0.74
USH1C-201ENST00000005226 NXPH4O95158 308 aa10.44□□□□□ -0.74
USH1C-201ENST00000005226 PPP1R17O96001 155 aa10.44□□□□□ -0.74
USH1C-201ENST00000005226 MT-ATP8P03928 68 aa10.44□□□□□ -0.74
USH1C-201ENST00000005226 SCGB1C2P0DMR2 95 aa10.44□□□□□ -0.74
USH1C-201ENST00000005226 ZNF56Q15929 161 aa10.44□□□□□ -0.74
USH1C-201ENST00000005226 POM121L12Q8N7R1 296 aa10.44□□□□□ -0.74
USH1C-201ENST00000005226 ITPR1Q14643 2758 aa10.44□□□□□ -0.74
USH1C-201ENST00000005226 IGHG2P01859 326 aa10.44□□□□□ -0.74
USH1C-201ENST00000005226 SCGB1A1P11684 91 aa10.44□□□□□ -0.74
USH1C-201ENST00000005226 AMELXQ99217 191 aa10.44□□□□□ -0.74
USH1C-201ENST00000005226 DAZ1Q9NQZ3 744 aaKnown RBP10.44□□□□□ -0.74
USH1C-201ENST00000005226 J3QQQ9 107 aa10.43□□□□□ -0.74
USH1C-201ENST00000005226 EIF4EBP3O60516 100 aaPredicted RBP10.43□□□□□ -0.74
USH1C-201ENST00000005226 CRIP2P52943 208 aaPredicted RBP10.43□□□□□ -0.74
USH1C-201ENST00000005226 CKS1BP61024 79 aa10.43□□□□□ -0.74
USH1C-201ENST00000005226 SLC25A29Q8N8R3 303 aa10.43□□□□□ -0.74
USH1C-201ENST00000005226 USMG5Q96IX5 58 aa10.43□□□□□ -0.74
USH1C-201ENST00000005226 ADARB2-AS1A8MUL3 147 aa10.42□□□□□ -0.74
USH1C-201ENST00000005226 ZNF876PQ49A33 203 aa10.42□□□□□ -0.74
USH1C-201ENST00000005226 DCANP1Q8TF63 244 aa10.42□□□□□ -0.74
USH1C-201ENST00000005226 UTP20O75691 2785 aaKnown RBP10.42□□□□□ -0.74
USH1C-201ENST00000005226 IGHV3-73A0A0B4J1V6 119 aa10.42□□□□□ -0.74
USH1C-201ENST00000005226 TRAV2A0A0B4J234 112 aa10.42□□□□□ -0.74
USH1C-201ENST00000005226 P0DMU3 169 aa10.42□□□□□ -0.74
USH1C-201ENST00000005226 FAM231AP0DMU4 169 aa10.42□□□□□ -0.74
USH1C-201ENST00000005226 FAM231CP0DMU5 169 aa10.42□□□□□ -0.74
USH1C-201ENST00000005226 LGALS3P17931 250 aaKnown RBP10.42□□□□□ -0.74
USH1C-201ENST00000005226 XGP55808 180 aa10.42□□□□□ -0.74
USH1C-201ENST00000005226 SPINK13Q1W4C9 94 aa10.42□□□□□ -0.74
USH1C-201ENST00000005226 TRPT1Q86TN4 253 aaKnown RBP10.42□□□□□ -0.74
USH1C-201ENST00000005226 Q8N1Y9 231 aa10.42□□□□□ -0.74
USH1C-201ENST00000005226 TMEM141Q96I45 108 aa10.42□□□□□ -0.74
USH1C-201ENST00000005226 A4D1N5 150 aa10.41□□□□□ -0.74
USH1C-201ENST00000005226 A6NDX4 124 aa10.41□□□□□ -0.74
USH1C-201ENST00000005226 SPINK8P0C7L1 97 aa10.41□□□□□ -0.74
USH1C-201ENST00000005226 HTN1P15515 57 aa10.41□□□□□ -0.74
USH1C-201ENST00000005226 DUX5Q96PT3 197 aa10.41□□□□□ -0.74
USH1C-201ENST00000005226 IGHV3-16A0A0C4DH30 117 aa10.41□□□□□ -0.74
USH1C-201ENST00000005226 A0A0J9YXV3 536 aa10.41□□□□□ -0.74
USH1C-201ENST00000005226 PRM2P04554 102 aa10.41□□□□□ -0.74
USH1C-201ENST00000005226 Q5PR19 223 aa10.41□□□□□ -0.74
USH1C-201ENST00000005226 TIMM17AQ99595 171 aa10.41□□□□□ -0.74
USH1C-201ENST00000005226 CSMD2Q7Z408 3487 aa10.41□□□□□ -0.74
USH1C-201ENST00000005226 TRBV27A0A0K0K1C4 114 aa10.4□□□□□ -0.74
USH1C-201ENST00000005226 M0QY20 66 aa10.4□□□□□ -0.74
USH1C-201ENST00000005226 PAPPA-AS1Q5QFB9 102 aa10.4□□□□□ -0.74
USH1C-201ENST00000005226 C10orf126Q8N4M7 172 aa10.4□□□□□ -0.74
USH1C-201ENST00000005226 PRO1854Q9UHT4 67 aa10.4□□□□□ -0.74
USH1C-201ENST00000005226 A0A1B0GV72 72 aa10.4□□□□□ -0.75
USH1C-201ENST00000005226 AVPP01185 164 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms