RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 ZNF80P51504 273 aaPredicted RBP6.63□□□□□ -1.35
PHGDH-219ENST00000641513 DEFB114Q30KQ6 69 aa6.63□□□□□ -1.35
PHGDH-219ENST00000641513 CD300EQ496F6 205 aaPredicted RBP6.63□□□□□ -1.35
PHGDH-219ENST00000641513 LYZL1Q6UWQ5 148 aa6.63□□□□□ -1.35
PHGDH-219ENST00000641513 TMEM61Q8N0U2 210 aa6.63□□□□□ -1.35
PHGDH-219ENST00000641513 ORMDL3Q8N138 153 aa6.63□□□□□ -1.35
PHGDH-219ENST00000641513 DEFB125Q8N687 156 aa6.63□□□□□ -1.35
PHGDH-219ENST00000641513 FER1L6-AS1Q8NA97 138 aa6.63□□□□□ -1.35
PHGDH-219ENST00000641513 TPPP3Q9BW30 176 aa6.63□□□□□ -1.35
PHGDH-219ENST00000641513 OR4C46A6NHA9 309 aa6.62□□□□□ -1.35
PHGDH-219ENST00000641513 ADARB2-AS1A8MUL3 147 aa6.62□□□□□ -1.35
PHGDH-219ENST00000641513 DUSP14O95147 198 aaKnown RBP6.62□□□□□ -1.35
PHGDH-219ENST00000641513 TSPOP30536 169 aa6.62□□□□□ -1.35
PHGDH-219ENST00000641513 RNASE4P34096 147 aaKnown RBP6.62□□□□□ -1.35
PHGDH-219ENST00000641513 DEFB131AP59861 70 aa6.62□□□□□ -1.35
PHGDH-219ENST00000641513 Q6ZN92 141 aa6.62□□□□□ -1.35
PHGDH-219ENST00000641513 FA2HQ7L5A8 372 aa6.62□□□□□ -1.35
PHGDH-219ENST00000641513 SORL1Q92673 2214 aa6.61□□□□□ -1.35
PHGDH-219ENST00000641513 IGHV4-4A0A075B6R2 117 aa6.61□□□□□ -1.35
PHGDH-219ENST00000641513 TRAV2A0A0B4J234 112 aa6.61□□□□□ -1.35
PHGDH-219ENST00000641513 PRSS47A8MTI9 375 aa6.61□□□□□ -1.35
PHGDH-219ENST00000641513 HSBP1L1C9JCN9 74 aa6.61□□□□□ -1.35
PHGDH-219ENST00000641513 IGLL1P15814 213 aa6.61□□□□□ -1.35
PHGDH-219ENST00000641513 LEPP41159 167 aa6.61□□□□□ -1.35
PHGDH-219ENST00000641513 PRELID3AQ96N28 172 aa6.61□□□□□ -1.35
PHGDH-219ENST00000641513 ZNF747Q9BV97 191 aa6.61□□□□□ -1.35
PHGDH-219ENST00000641513 F8P00451 2351 aa6.61□□□□□ -1.35
PHGDH-219ENST00000641513 NSD1Q96L73 2696 aaPredicted RBP6.6□□□□□ -1.35
PHGDH-219ENST00000641513 TRAV25A0A0B4J276 109 aa6.6□□□□□ -1.35
PHGDH-219ENST00000641513 A0A0J9YX75 114 aa6.6□□□□□ -1.35
PHGDH-219ENST00000641513 KNCNA6PVL3 124 aa6.6□□□□□ -1.35
PHGDH-219ENST00000641513 DLEU1O43261 78 aa6.6□□□□□ -1.35
PHGDH-219ENST00000641513 MED14OSP0DP75 135 aa6.6□□□□□ -1.35
PHGDH-219ENST00000641513 CACNG7P62955 275 aa6.6□□□□□ -1.35
PHGDH-219ENST00000641513 LGALS9BQ3B8N2 356 aa6.6□□□□□ -1.35
PHGDH-219ENST00000641513 PRR9Q5T870 116 aa6.6□□□□□ -1.35
PHGDH-219ENST00000641513 LGALS9CQ6DKI2 356 aa6.6□□□□□ -1.35
PHGDH-219ENST00000641513 FOXI2Q6ZQN5 318 aa6.6□□□□□ -1.35
PHGDH-219ENST00000641513 PRSS3P2Q8NHM4 247 aa6.6□□□□□ -1.35
PHGDH-219ENST00000641513 SPAG8Q99932 426 aaPredicted RBP6.6□□□□□ -1.35
PHGDH-219ENST00000641513 NXT2Q9NPJ8 142 aaKnown RBP6.6□□□□□ -1.35
PHGDH-219ENST00000641513 TRAV21A0A0B4J279 112 aa6.59□□□□□ -1.35
PHGDH-219ENST00000641513 SNAI2O43623 268 aa6.59□□□□□ -1.35
PHGDH-219ENST00000641513 HBDP02042 147 aa6.59□□□□□ -1.35
PHGDH-219ENST00000641513 FXYD7P58549 80 aa6.59□□□□□ -1.35
PHGDH-219ENST00000641513 MRPL51Q4U2R6 128 aaKnown RBP6.59□□□□□ -1.35
PHGDH-219ENST00000641513 MUC21Q5SSG8 566 aa6.59□□□□□ -1.35
PHGDH-219ENST00000641513 ZFAND2AQ8N6M9 145 aa6.59□□□□□ -1.35
PHGDH-219ENST00000641513 ORAOV1Q8WV07 137 aa6.59□□□□□ -1.35
PHGDH-219ENST00000641513 MAP6D1Q9H9H5 199 aa6.59□□□□□ -1.35
PHGDH-219ENST00000641513 SIGLEC8Q9NYZ4 499 aa6.59□□□□□ -1.35
PHGDH-219ENST00000641513 TRAV12-3A0A0B4J271 114 aa6.58□□□□□ -1.36
PHGDH-219ENST00000641513 MUC21A0A0G2JKD1 596 aa6.58□□□□□ -1.36
PHGDH-219ENST00000641513 MUC21A0A140T8X8 626 aa6.58□□□□□ -1.36
PHGDH-219ENST00000641513 D6R8Y8 96 aa6.58□□□□□ -1.36
PHGDH-219ENST00000641513 KIR3DS1Q14943 382 aa6.58□□□□□ -1.36
PHGDH-219ENST00000641513 ZNF124Q15973 351 aa6.58□□□□□ -1.36
PHGDH-219ENST00000641513 SPINK13Q1W4C9 94 aa6.58□□□□□ -1.36
PHGDH-219ENST00000641513 SLC25A34Q6PIV7 304 aa6.58□□□□□ -1.36
PHGDH-219ENST00000641513 C12orf54Q6X4T0 127 aa6.58□□□□□ -1.36
PHGDH-219ENST00000641513 Q6ZQT7 251 aa6.58□□□□□ -1.36
PHGDH-219ENST00000641513 ZNF575Q86XF7 245 aa6.58□□□□□ -1.36
PHGDH-219ENST00000641513 APRG1Q8IVJ8 170 aa6.58□□□□□ -1.36
PHGDH-219ENST00000641513 FAM19A4Q96LR4 140 aa6.58□□□□□ -1.36
PHGDH-219ENST00000641513 MAP1LC3AQ9H492 121 aa6.58□□□□□ -1.36
PHGDH-219ENST00000641513 SCRT2Q9NQ03 307 aa6.58□□□□□ -1.36
PHGDH-219ENST00000641513 TIMM8BQ9Y5J9 83 aaPredicted RBP6.58□□□□□ -1.36
PHGDH-219ENST00000641513 TRAV12-2A0A075B6T6 113 aa6.57□□□□□ -1.36
PHGDH-219ENST00000641513 A0A096LNJ9 63 aa6.57□□□□□ -1.36
PHGDH-219ENST00000641513 IGKV3D-20A0A0C4DH25 116 aa6.57□□□□□ -1.36
PHGDH-219ENST00000641513 C7orf71A4D174 169 aa6.57□□□□□ -1.36
PHGDH-219ENST00000641513 OR11H12B2RN74 326 aa6.57□□□□□ -1.36
PHGDH-219ENST00000641513 K7EMI3 77 aa6.57□□□□□ -1.36
PHGDH-219ENST00000641513 S100A4P26447 101 aaKnown RBP6.57□□□□□ -1.36
PHGDH-219ENST00000641513 CKS2P33552 79 aa6.57□□□□□ -1.36
PHGDH-219ENST00000641513 PRR31Q5SQ13 230 aa6.57□□□□□ -1.36
PHGDH-219ENST00000641513 AMN1Q8IY45 258 aa6.57□□□□□ -1.36
PHGDH-219ENST00000641513 LINC00482Q8N8I6 264 aa6.57□□□□□ -1.36
PHGDH-219ENST00000641513 RNF185Q96GF1 192 aa6.57□□□□□ -1.36
PHGDH-219ENST00000641513 ODF3Q96PU9 254 aa6.57□□□□□ -1.36
PHGDH-219ENST00000641513 TMEM208Q9BTX3 173 aa6.57□□□□□ -1.36
PHGDH-219ENST00000641513 C11orf21Q9P2W6 132 aa6.57□□□□□ -1.36
PHGDH-219ENST00000641513 KLLNB2CW77 178 aa6.56□□□□□ -1.36
PHGDH-219ENST00000641513 H3BVH4 76 aa6.56□□□□□ -1.36
PHGDH-219ENST00000641513 SIVA1O15304 175 aa6.56□□□□□ -1.36
PHGDH-219ENST00000641513 IGLV1-51P01701 117 aa6.56□□□□□ -1.36
PHGDH-219ENST00000641513 COX8AP10176 69 aa6.56□□□□□ -1.36
PHGDH-219ENST00000641513 HLA-DRB4P13762 266 aa6.56□□□□□ -1.36
PHGDH-219ENST00000641513 ZNF25P17030 456 aaPredicted RBP6.56□□□□□ -1.36
PHGDH-219ENST00000641513 IFI27P40305 119 aaPredicted RBP6.56□□□□□ -1.36
PHGDH-219ENST00000641513 CDKN1BP46527 198 aa6.56□□□□□ -1.36
PHGDH-219ENST00000641513 CMC4P56277 68 aaPredicted RBP6.56□□□□□ -1.36
PHGDH-219ENST00000641513 TWIST1Q15672 202 aa6.56□□□□□ -1.36
PHGDH-219ENST00000641513 ANXA2RQ3ZCQ2 193 aa6.56□□□□□ -1.36
PHGDH-219ENST00000641513 FAM159AQ6UWV7 190 aa6.56□□□□□ -1.36
PHGDH-219ENST00000641513 LINC00173Q6ZV60 143 aa6.56□□□□□ -1.36
PHGDH-219ENST00000641513 SMIM15Q7Z3B0 74 aa6.56□□□□□ -1.36
PHGDH-219ENST00000641513 STHQ8IWL8 128 aa6.56□□□□□ -1.36
PHGDH-219ENST00000641513 ATOH7Q8N100 152 aa6.56□□□□□ -1.36
PHGDH-219ENST00000641513 MRAP2Q96G30 205 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms