RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 ZFP69Q49AA0 526 aa11.27□□□□□ -0.61
SMN2-216ENST00000638794 SMUG1Q53HV7 270 aa11.27□□□□□ -0.61
SMN2-216ENST00000638794 LELP1Q5T871 98 aa11.27□□□□□ -0.61
SMN2-216ENST00000638794 PRNTQ86SH4 94 aa11.27□□□□□ -0.61
SMN2-216ENST00000638794 CYB561D1Q8N8Q1 229 aa11.27□□□□□ -0.61
SMN2-216ENST00000638794 NTN5Q8WTR8 489 aaPredicted RBP11.27□□□□□ -0.61
SMN2-216ENST00000638794 EPDR1Q9UM22 224 aa11.27□□□□□ -0.61
SMN2-216ENST00000638794 FLG2Q5D862 2391 aaPredicted RBP11.27□□□□□ -0.61
SMN2-216ENST00000638794 Q8N814 137 aa11.26□□□□□ -0.61
SMN2-216ENST00000638794 PTH2Q96A98 100 aa11.26□□□□□ -0.61
SMN2-216ENST00000638794 AQP10Q96PS8 301 aa11.26□□□□□ -0.61
SMN2-216ENST00000638794 GTSF1LQ9H1H1 148 aa11.26□□□□□ -0.61
SMN2-216ENST00000638794 SH3BGRL3Q9H299 93 aa11.26□□□□□ -0.61
SMN2-216ENST00000638794 TMEM167BQ9NRX6 74 aa11.26□□□□□ -0.61
SMN2-216ENST00000638794 BOLA1Q9Y3E2 137 aa11.26□□□□□ -0.61
SMN2-216ENST00000638794 CXorf1O96002 111 aa11.25□□□□□ -0.61
SMN2-216ENST00000638794 MBP02144 154 aa11.25□□□□□ -0.61
SMN2-216ENST00000638794 MGST1P10620 155 aaKnown RBP11.25□□□□□ -0.61
SMN2-216ENST00000638794 SERF2P84101 59 aa11.25□□□□□ -0.61
SMN2-216ENST00000638794 ATP6V0E2Q8NHE4 81 aa11.25□□□□□ -0.61
SMN2-216ENST00000638794 TMEM70Q9BUB7 260 aa11.25□□□□□ -0.61
SMN2-216ENST00000638794 Q8N3U1 123 aa11.24□□□□□ -0.61
SMN2-216ENST00000638794 ACTR3CQ9C0K3 210 aaPredicted RBP11.24□□□□□ -0.61
SMN2-216ENST00000638794 IGKV3D-20A0A0C4DH25 116 aa11.23□□□□□ -0.61
SMN2-216ENST00000638794 LAGE3Q14657 143 aa11.23□□□□□ -0.61
SMN2-216ENST00000638794 SAPCD1Q5SSQ6 148 aa11.23□□□□□ -0.61
SMN2-216ENST00000638794 Q6ZSN1 163 aa11.23□□□□□ -0.61
SMN2-216ENST00000638794 LINC00479Q96M42 142 aa11.23□□□□□ -0.61
SMN2-216ENST00000638794 PARLQ9H300 379 aa11.23□□□□□ -0.61
SMN2-216ENST00000638794 TNFSF18Q9UNG2 199 aa11.23□□□□□ -0.61
SMN2-216ENST00000638794 TRAV34A0A0B4J273 112 aa11.22□□□□□ -0.61
SMN2-216ENST00000638794 A0A1W2PRE2 83 aa11.22□□□□□ -0.61
SMN2-216ENST00000638794 Q5BKY6 102 aa11.22□□□□□ -0.61
SMN2-216ENST00000638794 ARL2-SNX15V9GYD0 113 aa11.22□□□□□ -0.61
SMN2-216ENST00000638794 GAGE12JA6NER3 117 aa11.21□□□□□ -0.61
SMN2-216ENST00000638794 A8MWV9 139 aa11.21□□□□□ -0.61
SMN2-216ENST00000638794 FAM229AH3BQW9 127 aa11.21□□□□□ -0.61
SMN2-216ENST00000638794 LINC00694P0DN24 101 aa11.21□□□□□ -0.61
SMN2-216ENST00000638794 S100A4P26447 101 aaKnown RBP11.21□□□□□ -0.61
SMN2-216ENST00000638794 GAGE1Q13065 139 aa11.21□□□□□ -0.61
SMN2-216ENST00000638794 GAGE4Q13068 117 aa11.21□□□□□ -0.61
SMN2-216ENST00000638794 GAGE5Q13069 117 aa11.21□□□□□ -0.61
SMN2-216ENST00000638794 GAGE13Q4V321 117 aa11.21□□□□□ -0.61
SMN2-216ENST00000638794 ZFP2Q6ZN57 461 aa11.21□□□□□ -0.61
SMN2-216ENST00000638794 MED28Q9H204 178 aa11.21□□□□□ -0.61
SMN2-216ENST00000638794 FAM30AQ9NZY2 134 aa11.21□□□□□ -0.61
SMN2-216ENST00000638794 WFDC2Q14508 124 aa11.2□□□□□ -0.62
SMN2-216ENST00000638794 ZNF726P1Q15940 193 aa11.2□□□□□ -0.62
SMN2-216ENST00000638794 LGALSLQ3ZCW2 172 aaPredicted RBP11.2□□□□□ -0.62
SMN2-216ENST00000638794 PIK3CD-AS1Q5SR53 167 aa11.2□□□□□ -0.62
SMN2-216ENST00000638794 TM2D2Q9BX73 214 aa11.2□□□□□ -0.62
SMN2-216ENST00000638794 JPT2Q9H910 190 aa11.2□□□□□ -0.62
SMN2-216ENST00000638794 Q9UF83 564 aa11.2□□□□□ -0.62
SMN2-216ENST00000638794 ASIPP42127 132 aa11.19□□□□□ -0.62
SMN2-216ENST00000638794 UBE2G2P60604 165 aa11.19□□□□□ -0.62
SMN2-216ENST00000638794 RPL7L1Q6DKI1 246 aaKnown RBP11.19□□□□□ -0.62
SMN2-216ENST00000638794 UFSP1Q6NVU6 142 aa11.19□□□□□ -0.62
SMN2-216ENST00000638794 Q86TA4 180 aa11.19□□□□□ -0.62
SMN2-216ENST00000638794 OR2T35Q8NGX2 323 aa11.19□□□□□ -0.62
SMN2-216ENST00000638794 SAMD10Q9BYL1 202 aa11.19□□□□□ -0.62
SMN2-216ENST00000638794 CTXND1A0A1B0GTU2 59 aa11.18□□□□□ -0.62
SMN2-216ENST00000638794 RNF222A6NCQ9 220 aa11.18□□□□□ -0.62
SMN2-216ENST00000638794 FABP5P3A8MUU1 101 aa11.18□□□□□ -0.62
SMN2-216ENST00000638794 H3BVH4 76 aa11.18□□□□□ -0.62
SMN2-216ENST00000638794 PTTG1O95997 202 aa11.18□□□□□ -0.62
SMN2-216ENST00000638794 IFNA7P01567 189 aa11.18□□□□□ -0.62
SMN2-216ENST00000638794 DAZ4Q86SG3 579 aaKnown RBP11.18□□□□□ -0.62
SMN2-216ENST00000638794 C14orf178Q8N769 122 aaPredicted RBP11.18□□□□□ -0.62
SMN2-216ENST00000638794 INO80EQ8NBZ0 244 aaPredicted RBP11.18□□□□□ -0.62
SMN2-216ENST00000638794 DAZ3Q9NR90 486 aaKnown RBP11.18□□□□□ -0.62
SMN2-216ENST00000638794 IL36BQ9NZH7 164 aa11.18□□□□□ -0.62
SMN2-216ENST00000638794 B4DEV8 164 aa11.17□□□□□ -0.62
SMN2-216ENST00000638794 PEX7O00628 323 aa11.17□□□□□ -0.62
SMN2-216ENST00000638794 GIPP09681 153 aaPredicted RBP11.17□□□□□ -0.62
SMN2-216ENST00000638794 TRAV8-3A0A0A6YYJ7 113 aa11.16□□□□□ -0.62
SMN2-216ENST00000638794 LECT2O14960 151 aa11.16□□□□□ -0.62
SMN2-216ENST00000638794 C1QBP02746 253 aa11.16□□□□□ -0.62
SMN2-216ENST00000638794 CRIP1P50238 77 aa11.16□□□□□ -0.62
SMN2-216ENST00000638794 DMRTA1Q5VZB9 504 aa11.16□□□□□ -0.62
SMN2-216ENST00000638794 ZC2HC1AQ96GY0 325 aa11.16□□□□□ -0.62
SMN2-216ENST00000638794 FXYD6-FXYD2A0A087WZ82 144 aa11.15□□□□□ -0.62
SMN2-216ENST00000638794 BORCS7-ASMTA0A0B4J1R7 106 aa11.15□□□□□ -0.62
SMN2-216ENST00000638794 FAM74A7A6NL05 159 aa11.15□□□□□ -0.62
SMN2-216ENST00000638794 KRBOX1C9JBD0 128 aa11.15□□□□□ -0.62
SMN2-216ENST00000638794 M0R036 132 aa11.15□□□□□ -0.62
SMN2-216ENST00000638794 FGF8P55075 233 aaPredicted RBP11.15□□□□□ -0.62
SMN2-216ENST00000638794 HIST1H2BAQ96A08 127 aa11.15□□□□□ -0.62
SMN2-216ENST00000638794 A0A087WWC5 75 aa11.14□□□□□ -0.63
SMN2-216ENST00000638794 RHODO00212 210 aa11.14□□□□□ -0.63
SMN2-216ENST00000638794 ARMS2P0C7Q2 107 aa11.14□□□□□ -0.63
SMN2-216ENST00000638794 TOR2AQ5JU69 321 aa11.14□□□□□ -0.63
SMN2-216ENST00000638794 DNLZQ5SXM8 178 aa11.14□□□□□ -0.63
SMN2-216ENST00000638794 FAM74A4Q5TZK3 123 aa11.14□□□□□ -0.63
SMN2-216ENST00000638794 NKX6-2Q9C056 277 aaPredicted RBP11.14□□□□□ -0.63
SMN2-216ENST00000638794 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.13□□□□□ -0.63
SMN2-216ENST00000638794 GRIFINA4D1Z8 144 aa11.13□□□□□ -0.63
SMN2-216ENST00000638794 SH2D1AO60880 128 aa11.13□□□□□ -0.63
SMN2-216ENST00000638794 Q6ZSA8 131 aa11.13□□□□□ -0.63
SMN2-216ENST00000638794 COX8CQ7Z4L0 72 aa11.13□□□□□ -0.63
SMN2-216ENST00000638794 SYT8Q8NBV8 401 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms