RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 TMEM18Q96B42 140 aa15.98■□□□□ 0.15
SCARB2-212ENST00000638663 SCRT2Q9NQ03 307 aa15.98■□□□□ 0.15
SCARB2-212ENST00000638663 IGHV1OR15-1A0A075B7D0 117 aa15.97■□□□□ 0.15
SCARB2-212ENST00000638663 D6R8Y8 96 aa15.96■□□□□ 0.15
SCARB2-212ENST00000638663 EVI2AP22794 236 aa15.96■□□□□ 0.15
SCARB2-212ENST00000638663 BEAN1Q3B7T3 259 aa15.96■□□□□ 0.15
SCARB2-212ENST00000638663 DMRTA1Q5VZB9 504 aa15.96■□□□□ 0.15
SCARB2-212ENST00000638663 LINC00518Q8N0U6 118 aa15.96■□□□□ 0.14
SCARB2-212ENST00000638663 RNF185Q96GF1 192 aa15.96■□□□□ 0.14
SCARB2-212ENST00000638663 CMC4P56277 68 aaPredicted RBP15.95■□□□□ 0.14
SCARB2-212ENST00000638663 Q8N1Y9 231 aa15.95■□□□□ 0.14
SCARB2-212ENST00000638663 RAB4AP20338 218 aa15.94■□□□□ 0.14
SCARB2-212ENST00000638663 KRTAP24-1Q3LI83 254 aa15.94■□□□□ 0.14
SCARB2-212ENST00000638663 SMIM15Q7Z3B0 74 aa15.94■□□□□ 0.14
SCARB2-212ENST00000638663 IGHV3-16A0A0C4DH30 117 aa15.94■□□□□ 0.14
SCARB2-212ENST00000638663 SMKR1H3BMG3 65 aa15.94■□□□□ 0.14
SCARB2-212ENST00000638663 ORMDL3Q8N138 153 aa15.94■□□□□ 0.14
SCARB2-212ENST00000638663 CLUHP3Q96NS8 147 aa15.94■□□□□ 0.14
SCARB2-212ENST00000638663 SAMD10Q9BYL1 202 aa15.94■□□□□ 0.14
SCARB2-212ENST00000638663 WFDC10AQ9H1F0 79 aa15.94■□□□□ 0.14
SCARB2-212ENST00000638663 U3KQK5 164 aa15.94■□□□□ 0.14
SCARB2-212ENST00000638663 CKS2P33552 79 aa15.93■□□□□ 0.14
SCARB2-212ENST00000638663 RNASEKQ6P5S7 137 aaKnown RBP15.93■□□□□ 0.14
SCARB2-212ENST00000638663 TRPT1Q86TN4 253 aaKnown RBP15.93■□□□□ 0.14
SCARB2-212ENST00000638663 NIT1Q86X76 327 aa15.93■□□□□ 0.14
SCARB2-212ENST00000638663 PRELID3AQ96N28 172 aa15.93■□□□□ 0.14
SCARB2-212ENST00000638663 MDFICQ9P1T7 246 aa15.93■□□□□ 0.14
SCARB2-212ENST00000638663 NCR2O95944 276 aa15.92■□□□□ 0.14
SCARB2-212ENST00000638663 URB1-AS1Q96HZ7 61 aa15.92■□□□□ 0.14
SCARB2-212ENST00000638663 C19orf73Q9NVV2 129 aa15.92■□□□□ 0.14
SCARB2-212ENST00000638663 HTN1P15515 57 aa15.92■□□□□ 0.14
SCARB2-212ENST00000638663 CBY3A6NI87 242 aa15.91■□□□□ 0.14
SCARB2-212ENST00000638663 PMCHP20382 165 aa15.91■□□□□ 0.14
SCARB2-212ENST00000638663 C12orf57Q99622 126 aa15.91■□□□□ 0.14
SCARB2-212ENST00000638663 FAM110AQ9BQ89 295 aa15.91■□□□□ 0.14
SCARB2-212ENST00000638663 XCL2Q9UBD3 114 aa15.91■□□□□ 0.14
SCARB2-212ENST00000638663 C9orf85Q96MD7 179 aa15.9■□□□□ 0.14
SCARB2-212ENST00000638663 MUC4Q99102 2169 aa15.9■□□□□ 0.14
SCARB2-212ENST00000638663 INSP01308 110 aa15.9■□□□□ 0.14
SCARB2-212ENST00000638663 SMIM6P0DI80 62 aa15.9■□□□□ 0.14
SCARB2-212ENST00000638663 AMTP48728 403 aa15.9■□□□□ 0.14
SCARB2-212ENST00000638663 C9orf66Q5T8R8 295 aa15.9■□□□□ 0.14
SCARB2-212ENST00000638663 FAM19A2Q8N3H0 131 aa15.9■□□□□ 0.14
SCARB2-212ENST00000638663 VWFP04275 2813 aa15.89■□□□□ 0.13
SCARB2-212ENST00000638663 NXPH4O95158 308 aa15.89■□□□□ 0.13
SCARB2-212ENST00000638663 GAS8-AS1O95177 125 aa15.89■□□□□ 0.13
SCARB2-212ENST00000638663 PYY3Q5JQD4 70 aa15.89■□□□□ 0.13
SCARB2-212ENST00000638663 TRGV11A0A075B6L2 103 aa15.88■□□□□ 0.13
SCARB2-212ENST00000638663 HSBP1O75506 76 aa15.88■□□□□ 0.13
SCARB2-212ENST00000638663 NPYP01303 97 aa15.88■□□□□ 0.13
SCARB2-212ENST00000638663 INSL3P51460 131 aa15.88■□□□□ 0.13
SCARB2-212ENST00000638663 C14orf178Q8N769 122 aaPredicted RBP15.88■□□□□ 0.13
SCARB2-212ENST00000638663 PRM2P04554 102 aa15.88■□□□□ 0.13
SCARB2-212ENST00000638663 PPBPP02775 128 aa15.87■□□□□ 0.13
SCARB2-212ENST00000638663 LINC00614P0C842 121 aa15.87■□□□□ 0.13
SCARB2-212ENST00000638663 AP1S3Q96PC3 154 aa15.87■□□□□ 0.13
SCARB2-212ENST00000638663 LINC01587Q99440 93 aa15.87■□□□□ 0.13
SCARB2-212ENST00000638663 NOTCH3Q9UM47 2321 aa15.87■□□□□ 0.13
SCARB2-212ENST00000638663 LOC389332A0A1B0GUA5 103 aa15.86■□□□□ 0.13
SCARB2-212ENST00000638663 GATA1P15976 413 aaPredicted RBP15.86■□□□□ 0.13
SCARB2-212ENST00000638663 NUTF2P61970 127 aaKnown RBP15.86■□□□□ 0.13
SCARB2-212ENST00000638663 TRAV26-2A0A0B4J265 109 aa15.86■□□□□ 0.13
SCARB2-212ENST00000638663 PRIMA1Q86XR5 153 aa15.86■□□□□ 0.13
SCARB2-212ENST00000638663 CHCHD1Q96BP2 118 aaKnown RBP15.86■□□□□ 0.13
SCARB2-212ENST00000638663 C20orf144Q9BQM9 153 aa15.86■□□□□ 0.13
SCARB2-212ENST00000638663 DPH3P1Q9H4G8 78 aa15.86■□□□□ 0.13
SCARB2-212ENST00000638663 RPL35AP18077 110 aaKnown RBP15.85■□□□□ 0.13
SCARB2-212ENST00000638663 PRSS3P2Q8NHM4 247 aa15.85■□□□□ 0.13
SCARB2-212ENST00000638663 JPT2Q9H910 190 aa15.85■□□□□ 0.13
SCARB2-212ENST00000638663 IFI27P40305 119 aaPredicted RBP15.84■□□□□ 0.13
SCARB2-212ENST00000638663 Q6ZWC4 215 aa15.84■□□□□ 0.13
SCARB2-212ENST00000638663 PMCHL1Q16048 86 aa15.84■□□□□ 0.13
SCARB2-212ENST00000638663 DEFB125Q8N687 156 aa15.84■□□□□ 0.13
SCARB2-212ENST00000638663 TNFRSF6BO95407 300 aa15.83■□□□□ 0.12
SCARB2-212ENST00000638663 MGPP08493 103 aa15.83■□□□□ 0.12
SCARB2-212ENST00000638663 SYT8Q8NBV8 401 aa15.83■□□□□ 0.12
SCARB2-212ENST00000638663 TMEM208Q9BTX3 173 aa15.83■□□□□ 0.12
SCARB2-212ENST00000638663 IGHV3OR16-12A0A075B7B8 117 aa15.82■□□□□ 0.12
SCARB2-212ENST00000638663 FA2HQ7L5A8 372 aa15.82■□□□□ 0.12
SCARB2-212ENST00000638663 C1orf158Q8N1D5 194 aa15.82■□□□□ 0.12
SCARB2-212ENST00000638663 LINC00467Q9BRT7 94 aa15.82■□□□□ 0.12
SCARB2-212ENST00000638663 ZNF747Q9BV97 191 aa15.82■□□□□ 0.12
SCARB2-212ENST00000638663 LAMTOR2Q9Y2Q5 125 aa15.82■□□□□ 0.12
SCARB2-212ENST00000638663 GIG44P09565 113 aaPredicted RBP15.81■□□□□ 0.12
SCARB2-212ENST00000638663 SMIM17P0DL12 118 aa15.81■□□□□ 0.12
SCARB2-212ENST00000638663 CDPF1Q6NVV7 123 aa15.81■□□□□ 0.12
SCARB2-212ENST00000638663 GTSCR1Q86UQ5 136 aa15.81■□□□□ 0.12
SCARB2-212ENST00000638663 MRAP2Q96G30 205 aa15.81■□□□□ 0.12
SCARB2-212ENST00000638663 A0A087WWL8 130 aa15.8■□□□□ 0.12
SCARB2-212ENST00000638663 JOSD1Q15040 202 aaPredicted RBP15.8■□□□□ 0.12
SCARB2-212ENST00000638663 ZNF876PQ49A33 203 aa15.8■□□□□ 0.12
SCARB2-212ENST00000638663 WFDC9Q8NEX5 89 aa15.8■□□□□ 0.12
SCARB2-212ENST00000638663 MCRIP2Q9BUT9 160 aaKnown RBP15.8■□□□□ 0.12
SCARB2-212ENST00000638663 MAP1LC3AQ9H492 121 aa15.8■□□□□ 0.12
SCARB2-212ENST00000638663 AP5S1Q9NUS5 200 aa15.8■□□□□ 0.12
SCARB2-212ENST00000638663 KIF25-AS1Q9Y6Z4 181 aa15.8■□□□□ 0.12
SCARB2-212ENST00000638663 IGHV1-24A0A0C4DH33 117 aa15.8■□□□□ 0.12
SCARB2-212ENST00000638663 IGLL1P15814 213 aa15.8■□□□□ 0.12
SCARB2-212ENST00000638663 NRACQ8N912 160 aa15.8■□□□□ 0.12
SCARB2-212ENST00000638663 NIT2Q9NQR4 276 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms