RNA–Protein interactions for RNA: ENST00000638448.1

GYPB-216, Transcript of glycophorin B (MNS blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GYPB, Length 363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-216ENST00000638448 PPP1R1CQ8WVI7 109 aa0.73□□□□□ -2.29
GYPB-216ENST00000638448 C1orf54Q8WWF1 131 aa0.73□□□□□ -2.29
GYPB-216ENST00000638448 SDF2Q99470 211 aa0.73□□□□□ -2.29
GYPB-216ENST00000638448 CCDC167Q9P0B6 97 aa0.73□□□□□ -2.29
GYPB-216ENST00000638448 BLMP54132 1417 aaPredicted RBP0.72□□□□□ -2.29
GYPB-216ENST00000638448 TMEM2Q9UHN6 1383 aa0.72□□□□□ -2.29
GYPB-216ENST00000638448 CTTNBP2Q8WZ74 1663 aa0.72□□□□□ -2.29
GYPB-216ENST00000638448 ZFC3H1O60293 1989 aaKnown RBP0.72□□□□□ -2.29
GYPB-216ENST00000638448 ADGRB1O14514 1584 aa0.72□□□□□ -2.29
GYPB-216ENST00000638448 LOC101927531A0A1B0GV80 90 aa0.72□□□□□ -2.29
GYPB-216ENST00000638448 EFCAB10A6NFE3 127 aa0.72□□□□□ -2.29
GYPB-216ENST00000638448 PITX3O75364 302 aa0.72□□□□□ -2.29
GYPB-216ENST00000638448 PYYP10082 97 aa0.72□□□□□ -2.29
GYPB-216ENST00000638448 RRAS2P62070 204 aaPredicted RBP0.72□□□□□ -2.29
GYPB-216ENST00000638448 KLKP1Q107X0 134 aa0.72□□□□□ -2.29
GYPB-216ENST00000638448 SPINK9Q5DT21 86 aa0.72□□□□□ -2.29
GYPB-216ENST00000638448 PLAC4Q8WY50 150 aa0.72□□□□□ -2.29
GYPB-216ENST00000638448 LINC00208Q96KT6 92 aa0.72□□□□□ -2.29
GYPB-216ENST00000638448 ERCC6Q03468 1493 aa0.72□□□□□ -2.29
GYPB-216ENST00000638448 SYNJ1O43426 1573 aa0.71□□□□□ -2.3
GYPB-216ENST00000638448 CASP8AP2Q9UKL3 1982 aa0.71□□□□□ -2.3
GYPB-216ENST00000638448 SLC25A6P12236 298 aa0.71□□□□□ -2.3
GYPB-216ENST00000638448 SPCS2Q15005 226 aa0.71□□□□□ -2.3
GYPB-216ENST00000638448 OR2T2Q6IF00 324 aa0.71□□□□□ -2.3
GYPB-216ENST00000638448 ZCCHC6Q5VYS8 1495 aaKnown RBP0.71□□□□□ -2.3
GYPB-216ENST00000638448 ASH1LQ9NR48 2969 aaKnown RBP0.71□□□□□ -2.3
GYPB-216ENST00000638448 ZGRF1Q86YA3 2104 aa0.7□□□□□ -2.3
GYPB-216ENST00000638448 TRAV12-2A0A075B6T6 113 aa0.7□□□□□ -2.3
GYPB-216ENST00000638448 A0A096LNT2 108 aa0.7□□□□□ -2.3
GYPB-216ENST00000638448 TRAV17A0A0B4J275 112 aa0.7□□□□□ -2.3
GYPB-216ENST00000638448 ZNF56Q15929 161 aa0.7□□□□□ -2.3
GYPB-216ENST00000638448 SPANXN1Q5VSR9 72 aa0.7□□□□□ -2.3
GYPB-216ENST00000638448 Q6ZUT4 128 aa0.7□□□□□ -2.3
GYPB-216ENST00000638448 TSC22D3Q99576 134 aa0.7□□□□□ -2.3
GYPB-216ENST00000638448 FANCMQ8IYD8 2048 aa0.7□□□□□ -2.3
GYPB-216ENST00000638448 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.69□□□□□ -2.3
GYPB-216ENST00000638448 GRIN2AQ12879 1464 aa0.69□□□□□ -2.3
GYPB-216ENST00000638448 CDK12Q9NYV4 1490 aaPredicted RBP0.69□□□□□ -2.3
GYPB-216ENST00000638448 MCRIP1C9JLW8 97 aa0.69□□□□□ -2.3
GYPB-216ENST00000638448 EMX2Q04743 252 aa0.69□□□□□ -2.3
GYPB-216ENST00000638448 IQCJQ1A5X6 159 aa0.69□□□□□ -2.3
GYPB-216ENST00000638448 MIC13Q5XKP0 118 aa0.69□□□□□ -2.3
GYPB-216ENST00000638448 Q86TA4 180 aa0.69□□□□□ -2.3
GYPB-216ENST00000638448 BET1LQ9NYM9 111 aa0.69□□□□□ -2.3
GYPB-216ENST00000638448 NDUFA12Q9UI09 145 aa0.69□□□□□ -2.3
GYPB-216ENST00000638448 LRP5O75197 1615 aa0.68□□□□□ -2.3
GYPB-216ENST00000638448 PTPRDP23468 1912 aa0.68□□□□□ -2.3
GYPB-216ENST00000638448 NINQ8N4C6 2090 aa0.68□□□□□ -2.3
GYPB-216ENST00000638448 RPL37P61927 97 aaKnown RBP0.68□□□□□ -2.3
GYPB-216ENST00000638448 KCNRGQ8N5I3 272 aa0.68□□□□□ -2.3
GYPB-216ENST00000638448 ARL11Q969Q4 196 aa0.68□□□□□ -2.3
GYPB-216ENST00000638448 DPH3Q96FX2 82 aa0.68□□□□□ -2.3
GYPB-216ENST00000638448 TMEM141Q96I45 108 aa0.68□□□□□ -2.3
GYPB-216ENST00000638448 PSMG3Q9BT73 122 aaPredicted RBP0.68□□□□□ -2.3
GYPB-216ENST00000638448 LINC00470Q9BZP3 86 aa0.68□□□□□ -2.3
GYPB-216ENST00000638448 TMEM14BQ9NUH8 114 aa0.68□□□□□ -2.3
GYPB-216ENST00000638448 COA4Q9NYJ1 87 aa0.68□□□□□ -2.3
GYPB-216ENST00000638448 LAMA4Q16363 1823 aa0.68□□□□□ -2.3
GYPB-216ENST00000638448 PTPRMP28827 1452 aa0.67□□□□□ -2.3
GYPB-216ENST00000638448 CITO14578 2027 aa0.67□□□□□ -2.3
GYPB-216ENST00000638448 DAPK1P53355 1430 aa0.67□□□□□ -2.3
GYPB-216ENST00000638448 PIRTP0C851 137 aa0.67□□□□□ -2.3
GYPB-216ENST00000638448 BTG2P78543 158 aa0.67□□□□□ -2.3
GYPB-216ENST00000638448 PRB3Q04118 309 aaPredicted RBP0.67□□□□□ -2.3
GYPB-216ENST00000638448 C9orf116Q5BN46 136 aaPredicted RBP0.67□□□□□ -2.3
GYPB-216ENST00000638448 SLC48A1Q6P1K1 146 aa0.67□□□□□ -2.3
GYPB-216ENST00000638448 TSKUQ8WUA8 353 aa0.67□□□□□ -2.3
GYPB-216ENST00000638448 COPS9Q8WXC6 57 aa0.67□□□□□ -2.3
GYPB-216ENST00000638448 IFI27L1Q96BM0 104 aa0.67□□□□□ -2.3
GYPB-216ENST00000638448 SNRNP25Q9BV90 132 aaKnown RBP0.67□□□□□ -2.3
GYPB-216ENST00000638448 FAM107BQ9H098 131 aa0.67□□□□□ -2.3
GYPB-216ENST00000638448 ANK1P16157 1881 aa0.67□□□□□ -2.3
GYPB-216ENST00000638448 BICRAQ9NZM4 1560 aa0.66□□□□□ -2.3
GYPB-216ENST00000638448 MYH1P12882 1939 aa0.66□□□□□ -2.3
GYPB-216ENST00000638448 HELZP42694 1942 aaKnown RBP0.66□□□□□ -2.3
GYPB-216ENST00000638448 MYOM3Q5VTT5 1437 aa0.66□□□□□ -2.3
GYPB-216ENST00000638448 A0A0D9SG42 100 aa0.66□□□□□ -2.3
GYPB-216ENST00000638448 FAM92AA1XBS5 289 aa0.66□□□□□ -2.3
GYPB-216ENST00000638448 NDUFB6O95139 128 aa0.66□□□□□ -2.3
GYPB-216ENST00000638448 PIPP12273 146 aaPredicted RBP0.66□□□□□ -2.3
GYPB-216ENST00000638448 ZNF469Q96JG9 3925 aaPredicted RBP0.66□□□□□ -2.3
GYPB-216ENST00000638448 TCRBV3S1A0A5B6 114 aa0.65□□□□□ -2.31
GYPB-216ENST00000638448 RBAKDNA6NC62 111 aa0.65□□□□□ -2.31
GYPB-216ENST00000638448 ZNF137PP52743 207 aa0.65□□□□□ -2.31
GYPB-216ENST00000638448 SSBP1Q04837 148 aaKnown RBP0.65□□□□□ -2.31
GYPB-216ENST00000638448 CYP2G1PQ6ZSU1 146 aa0.65□□□□□ -2.31
GYPB-216ENST00000638448 C10orf95Q9H7T3 257 aa0.65□□□□□ -2.31
GYPB-216ENST00000638448 TMEM242Q9NWH2 141 aa0.65□□□□□ -2.31
GYPB-216ENST00000638448 ZDBF2Q9HCK1 2354 aa0.64□□□□□ -2.31
GYPB-216ENST00000638448 TRAV12-3A0A0B4J271 114 aa0.64□□□□□ -2.31
GYPB-216ENST00000638448 M0R129 80 aa0.64□□□□□ -2.31
GYPB-216ENST00000638448 FXYD1O00168 92 aa0.64□□□□□ -2.31
GYPB-216ENST00000638448 IFNA17P01571 189 aa0.64□□□□□ -2.31
GYPB-216ENST00000638448 APODP05090 189 aa0.64□□□□□ -2.31
GYPB-216ENST00000638448 IL5P05113 134 aa0.64□□□□□ -2.31
GYPB-216ENST00000638448 CCL3L1P16619 93 aa0.64□□□□□ -2.31
GYPB-216ENST00000638448 CBLN1P23435 193 aa0.64□□□□□ -2.31
GYPB-216ENST00000638448 SPINT3P49223 89 aa0.64□□□□□ -2.31
GYPB-216ENST00000638448 ELOF1P60002 83 aaKnown RBP0.64□□□□□ -2.31
GYPB-216ENST00000638448 SPTSSAQ969W0 71 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms