RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 A0A0J9YX75 114 aa16.07■□□□□ 0.16
CLN6-224ENST00000638076 HIST2H2BCQ6DN03 193 aa16.07■□□□□ 0.16
CLN6-224ENST00000638076 IGKV3-20P01619 116 aa16.07■□□□□ 0.16
CLN6-224ENST00000638076 G0S2P27469 103 aa16.07■□□□□ 0.16
CLN6-224ENST00000638076 SLURP1P55000 103 aa16.06■□□□□ 0.16
CLN6-224ENST00000638076 CD5LO43866 347 aa16.05■□□□□ 0.16
CLN6-224ENST00000638076 LAGE3Q14657 143 aa16.05■□□□□ 0.16
CLN6-224ENST00000638076 TCTEX1D4Q5JR98 221 aa16.05■□□□□ 0.16
CLN6-224ENST00000638076 C7orf71A4D174 169 aa16.05■□□□□ 0.16
CLN6-224ENST00000638076 ODF3Q96PU9 254 aa16.05■□□□□ 0.16
CLN6-224ENST00000638076 MGPP08493 103 aa16.04■□□□□ 0.16
CLN6-224ENST00000638076 ADAMTSL5Q6ZMM2 481 aa16.04■□□□□ 0.16
CLN6-224ENST00000638076 AP1S3Q96PC3 154 aa16.04■□□□□ 0.16
CLN6-224ENST00000638076 TRAV12-2A0A075B6T6 113 aa16.03■□□□□ 0.16
CLN6-224ENST00000638076 ZNF25P17030 456 aaPredicted RBP16.03■□□□□ 0.16
CLN6-224ENST00000638076 ANKRD39Q53RE8 183 aa16.03■□□□□ 0.16
CLN6-224ENST00000638076 RASL10AQ92737 203 aa16.03■□□□□ 0.16
CLN6-224ENST00000638076 DKK2Q9UBU2 259 aa16.03■□□□□ 0.16
CLN6-224ENST00000638076 CD7P09564 240 aa16.03■□□□□ 0.16
CLN6-224ENST00000638076 SMIM17P0DL12 118 aa16.03■□□□□ 0.16
CLN6-224ENST00000638076 COX8AP10176 69 aa16.03■□□□□ 0.16
CLN6-224ENST00000638076 NXPH4O95158 308 aa16.02■□□□□ 0.16
CLN6-224ENST00000638076 DPF1Q92782 380 aa16.02■□□□□ 0.16
CLN6-224ENST00000638076 SMIM2Q9BVW6 85 aa16.02■□□□□ 0.16
CLN6-224ENST00000638076 RPL39LQ96EH5 51 aaKnown RBP16.02■□□□□ 0.15
CLN6-224ENST00000638076 PRSS1P07477 247 aa16.01■□□□□ 0.15
CLN6-224ENST00000638076 OR11H1Q8NG94 326 aa16.01■□□□□ 0.15
CLN6-224ENST00000638076 LINC01619G3V211 115 aa16.01■□□□□ 0.15
CLN6-224ENST00000638076 SUMO2P61956 95 aaKnown RBP16.01■□□□□ 0.15
CLN6-224ENST00000638076 KHDC1LQ5JSQ8 128 aa16.01■□□□□ 0.15
CLN6-224ENST00000638076 TENM4Q6N022 2769 aa16■□□□□ 0.15
CLN6-224ENST00000638076 CDKN1BP46527 198 aa16■□□□□ 0.15
CLN6-224ENST00000638076 GAGE1Q13065 139 aa16■□□□□ 0.15
CLN6-224ENST00000638076 SPINK13Q1W4C9 94 aa16■□□□□ 0.15
CLN6-224ENST00000638076 MPV17L2Q567V2 206 aa16■□□□□ 0.15
CLN6-224ENST00000638076 DUX3Q96PT4 197 aa16■□□□□ 0.15
CLN6-224ENST00000638076 DLEU1O43261 78 aa16■□□□□ 0.15
CLN6-224ENST00000638076 TCTAP57738 103 aa16■□□□□ 0.15
CLN6-224ENST00000638076 OR1N2Q8NGR9 330 aa16■□□□□ 0.15
CLN6-224ENST00000638076 MUC4Q99102 2169 aa16■□□□□ 0.15
CLN6-224ENST00000638076 ODF1Q14990 250 aa15.99■□□□□ 0.15
CLN6-224ENST00000638076 TMEM86BQ8N661 226 aa15.99■□□□□ 0.15
CLN6-224ENST00000638076 C20orf78Q9BR46 151 aa15.99■□□□□ 0.15
CLN6-224ENST00000638076 TMEM208Q9BTX3 173 aa15.99■□□□□ 0.15
CLN6-224ENST00000638076 ITPR3Q14573 2671 aa15.99■□□□□ 0.15
CLN6-224ENST00000638076 DUSP14O95147 198 aaKnown RBP15.99■□□□□ 0.15
CLN6-224ENST00000638076 FOXI2Q6ZQN5 318 aa15.99■□□□□ 0.15
CLN6-224ENST00000638076 C4orf3Q8WVX3 66 aa15.99■□□□□ 0.15
CLN6-224ENST00000638076 ATP5LO75964 103 aa15.98■□□□□ 0.15
CLN6-224ENST00000638076 NUDT3O95989 172 aa15.98■□□□□ 0.15
CLN6-224ENST00000638076 FOXC2Q99958 501 aa15.98■□□□□ 0.15
CLN6-224ENST00000638076 KIF25-AS1Q9Y6Z4 181 aa15.98■□□□□ 0.15
CLN6-224ENST00000638076 TEX29Q8N6K0 151 aa15.97■□□□□ 0.15
CLN6-224ENST00000638076 JPT2Q9H910 190 aa15.97■□□□□ 0.15
CLN6-224ENST00000638076 HIST2H2BDQ6DRA6 164 aa15.97■□□□□ 0.15
CLN6-224ENST00000638076 Q6ZSV7 163 aa15.97■□□□□ 0.15
CLN6-224ENST00000638076 POM121L12Q8N7R1 296 aa15.97■□□□□ 0.15
CLN6-224ENST00000638076 AGRNO00468 2067 aa15.97■□□□□ 0.15
CLN6-224ENST00000638076 FGF6P10767 208 aa15.96■□□□□ 0.15
CLN6-224ENST00000638076 LINC00315P59091 139 aa15.96■□□□□ 0.15
CLN6-224ENST00000638076 ZMAT4Q9H898 229 aa15.96■□□□□ 0.15
CLN6-224ENST00000638076 TLN2Q9Y4G6 2542 aa15.96■□□□□ 0.15
CLN6-224ENST00000638076 IGHV3-16A0A0C4DH30 117 aa15.96■□□□□ 0.15
CLN6-224ENST00000638076 OR9G4Q8NGQ1 327 aa15.96■□□□□ 0.15
CLN6-224ENST00000638076 PEMTQ9UBM1 199 aa15.96■□□□□ 0.15
CLN6-224ENST00000638076 DNAJC9-AS1A6NH13 148 aa15.95■□□□□ 0.14
CLN6-224ENST00000638076 AMTNQ6UX39 209 aa15.95■□□□□ 0.14
CLN6-224ENST00000638076 C2orf91Q6ZV80 131 aa15.95■□□□□ 0.14
CLN6-224ENST00000638076 Q8N1Y9 231 aa15.95■□□□□ 0.14
CLN6-224ENST00000638076 KLHL30-AS1Q8NEE0 82 aa15.95■□□□□ 0.14
CLN6-224ENST00000638076 MDFICQ9P1T7 246 aa15.95■□□□□ 0.14
CLN6-224ENST00000638076 ORMDL2Q53FV1 153 aa15.95■□□□□ 0.14
CLN6-224ENST00000638076 C9orf85Q96MD7 179 aa15.95■□□□□ 0.14
CLN6-224ENST00000638076 IGHV1OR15-1A0A075B7D0 117 aa15.94■□□□□ 0.14
CLN6-224ENST00000638076 BVES-AS1Q5T3Y7 98 aa15.94■□□□□ 0.14
CLN6-224ENST00000638076 DLX4Q92988 240 aaPredicted RBP15.94■□□□□ 0.14
CLN6-224ENST00000638076 A0A087WWL8 130 aa15.94■□□□□ 0.14
CLN6-224ENST00000638076 PPP1R17O96001 155 aa15.94■□□□□ 0.14
CLN6-224ENST00000638076 C12orf54Q6X4T0 127 aa15.94■□□□□ 0.14
CLN6-224ENST00000638076 CBY1Q9Y3M2 126 aa15.94■□□□□ 0.14
CLN6-224ENST00000638076 KNCNA6PVL3 124 aa15.93■□□□□ 0.14
CLN6-224ENST00000638076 IGKCP01834 107 aa15.93■□□□□ 0.14
CLN6-224ENST00000638076 PLA2G2AP14555 144 aa15.93■□□□□ 0.14
CLN6-224ENST00000638076 DEFB131AP59861 70 aa15.93■□□□□ 0.14
CLN6-224ENST00000638076 SORL1Q92673 2214 aa15.93■□□□□ 0.14
CLN6-224ENST00000638076 AKAP9Q99996 3911 aa15.93■□□□□ 0.14
CLN6-224ENST00000638076 NMUP48645 174 aa15.93■□□□□ 0.14
CLN6-224ENST00000638076 BOD1L2Q8IYS8 172 aa15.93■□□□□ 0.14
CLN6-224ENST00000638076 HHLA3Q9XRX5 114 aa15.93■□□□□ 0.14
CLN6-224ENST00000638076 NPSP0C0P6 89 aa15.92■□□□□ 0.14
CLN6-224ENST00000638076 Q6ZVH6 145 aa15.92■□□□□ 0.14
CLN6-224ENST00000638076 TMEM61Q8N0U2 210 aa15.92■□□□□ 0.14
CLN6-224ENST00000638076 K7EMI3 77 aa15.91■□□□□ 0.14
CLN6-224ENST00000638076 CSTL1Q9H114 145 aa15.91■□□□□ 0.14
CLN6-224ENST00000638076 MYO9AB2RTY4 2548 aa15.91■□□□□ 0.14
CLN6-224ENST00000638076 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.91■□□□□ 0.14
CLN6-224ENST00000638076 SUMO4Q6EEV6 95 aa15.91■□□□□ 0.14
CLN6-224ENST00000638076 TOMM6Q96B49 74 aa15.91■□□□□ 0.14
CLN6-224ENST00000638076 ESM1Q9NQ30 184 aa15.91■□□□□ 0.14
CLN6-224ENST00000638076 SONP18583 2426 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms