RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 TCAPO15273 167 aa11.43□□□□□ -0.58
SCN8A-214ENST00000637709 CD28P10747 220 aa11.43□□□□□ -0.58
SCN8A-214ENST00000637709 ASIPP42127 132 aa11.43□□□□□ -0.58
SCN8A-214ENST00000637709 TMEM61Q8N0U2 210 aa11.43□□□□□ -0.58
SCN8A-214ENST00000637709 Q8N2B8 174 aa11.43□□□□□ -0.58
SCN8A-214ENST00000637709 OR1N2Q8NGR9 330 aa11.43□□□□□ -0.58
SCN8A-214ENST00000637709 C20orf144Q9BQM9 153 aa11.43□□□□□ -0.58
SCN8A-214ENST00000637709 MIEN1Q9BRT3 115 aa11.43□□□□□ -0.58
SCN8A-214ENST00000637709 ZNF747Q9BV97 191 aa11.43□□□□□ -0.58
SCN8A-214ENST00000637709 TENM1Q9UKZ4 2725 aa11.43□□□□□ -0.58
SCN8A-214ENST00000637709 LINC01619G3V211 115 aa11.42□□□□□ -0.58
SCN8A-214ENST00000637709 RPL39LQ96EH5 51 aaKnown RBP11.42□□□□□ -0.58
SCN8A-214ENST00000637709 LENEPQ9Y5L5 61 aa11.42□□□□□ -0.58
SCN8A-214ENST00000637709 A0A0J9YX75 114 aa11.42□□□□□ -0.58
SCN8A-214ENST00000637709 RNF152Q8N8N0 203 aa11.42□□□□□ -0.58
SCN8A-214ENST00000637709 KLLNB2CW77 178 aa11.41□□□□□ -0.58
SCN8A-214ENST00000637709 SNAI2O43623 268 aa11.41□□□□□ -0.58
SCN8A-214ENST00000637709 DEFB131AP59861 70 aa11.41□□□□□ -0.58
SCN8A-214ENST00000637709 FAM159AQ6UWV7 190 aa11.41□□□□□ -0.58
SCN8A-214ENST00000637709 APRG1Q8IVJ8 170 aa11.41□□□□□ -0.58
SCN8A-214ENST00000637709 MAP1LC3AQ9H492 121 aa11.41□□□□□ -0.58
SCN8A-214ENST00000637709 HIVEP1P15822 2718 aa11.41□□□□□ -0.58
SCN8A-214ENST00000637709 A0A087WWL8 130 aa11.41□□□□□ -0.58
SCN8A-214ENST00000637709 IGLC3P0DOY3 106 aa11.41□□□□□ -0.58
SCN8A-214ENST00000637709 LEPP41159 167 aa11.41□□□□□ -0.58
SCN8A-214ENST00000637709 OR9G4Q8NGQ1 327 aa11.41□□□□□ -0.58
SCN8A-214ENST00000637709 MDFICQ9P1T7 246 aa11.41□□□□□ -0.58
SCN8A-214ENST00000637709 NACAE9PAV3 2078 aa11.4□□□□□ -0.58
SCN8A-214ENST00000637709 Q6ZN92 141 aa11.4□□□□□ -0.58
SCN8A-214ENST00000637709 NEGR1Q7Z3B1 354 aa11.4□□□□□ -0.58
SCN8A-214ENST00000637709 NSD1Q96L73 2696 aaPredicted RBP11.4□□□□□ -0.59
SCN8A-214ENST00000637709 TRAV9-2A0A087WT02 112 aa11.4□□□□□ -0.59
SCN8A-214ENST00000637709 LGALS9O00182 355 aa11.4□□□□□ -0.59
SCN8A-214ENST00000637709 SMIM15Q7Z3B0 74 aa11.4□□□□□ -0.59
SCN8A-214ENST00000637709 OR2K2Q8NGT1 345 aa11.4□□□□□ -0.59
SCN8A-214ENST00000637709 HSPB8Q9UJY1 196 aa11.4□□□□□ -0.59
SCN8A-214ENST00000637709 FLNBO75369 2602 aaKnown RBP11.39□□□□□ -0.59
SCN8A-214ENST00000637709 NRACQ8N912 160 aa11.39□□□□□ -0.59
SCN8A-214ENST00000637709 C4orf3Q8WVX3 66 aa11.39□□□□□ -0.59
SCN8A-214ENST00000637709 RAX2Q96IS3 184 aa11.39□□□□□ -0.59
SCN8A-214ENST00000637709 CITED2Q99967 270 aaPredicted RBP11.39□□□□□ -0.59
SCN8A-214ENST00000637709 CRXO43186 299 aaPredicted RBP11.38□□□□□ -0.59
SCN8A-214ENST00000637709 CACNG7P62955 275 aa11.38□□□□□ -0.59
SCN8A-214ENST00000637709 FAM74A4Q5TZK3 123 aa11.38□□□□□ -0.59
SCN8A-214ENST00000637709 HBDP02042 147 aa11.38□□□□□ -0.59
SCN8A-214ENST00000637709 RBMY1A1P0DJD3 496 aaKnown RBP11.38□□□□□ -0.59
SCN8A-214ENST00000637709 RBMY1CP0DJD4 496 aa11.38□□□□□ -0.59
SCN8A-214ENST00000637709 RBMY1FQ15415 496 aaKnown RBP11.38□□□□□ -0.59
SCN8A-214ENST00000637709 C2CD3Q4AC94 2353 aa11.37□□□□□ -0.59
SCN8A-214ENST00000637709 C7orf71A4D174 169 aa11.37□□□□□ -0.59
SCN8A-214ENST00000637709 CD300EQ496F6 205 aaPredicted RBP11.37□□□□□ -0.59
SCN8A-214ENST00000637709 Q8N1Y9 231 aa11.37□□□□□ -0.59
SCN8A-214ENST00000637709 DYNLRB2Q8TF09 96 aa11.37□□□□□ -0.59
SCN8A-214ENST00000637709 TMEM158Q8WZ71 300 aa11.37□□□□□ -0.59
SCN8A-214ENST00000637709 CD5LO43866 347 aa11.36□□□□□ -0.59
SCN8A-214ENST00000637709 CDKN1BP46527 198 aa11.36□□□□□ -0.59
SCN8A-214ENST00000637709 RBMY1BA6NDE4 496 aaKnown RBP11.35□□□□□ -0.59
SCN8A-214ENST00000637709 RBMY1EA6NEQ0 496 aaKnown RBP11.35□□□□□ -0.59
SCN8A-214ENST00000637709 RBMY1DP0C7P1 496 aaKnown RBP11.35□□□□□ -0.59
SCN8A-214ENST00000637709 STPG4Q8N801 248 aa11.35□□□□□ -0.59
SCN8A-214ENST00000637709 LINC01006Q8NI28 216 aa11.35□□□□□ -0.59
SCN8A-214ENST00000637709 RASL10AQ92737 203 aa11.35□□□□□ -0.59
SCN8A-214ENST00000637709 DKK2Q9UBU2 259 aa11.35□□□□□ -0.59
SCN8A-214ENST00000637709 IGHV4-4A0A075B6R2 117 aa11.35□□□□□ -0.59
SCN8A-214ENST00000637709 PPBPP02775 128 aa11.35□□□□□ -0.59
SCN8A-214ENST00000637709 FOXC2Q99958 501 aa11.35□□□□□ -0.59
SCN8A-214ENST00000637709 IGLV2-18A0A075B6J9 118 aa11.34□□□□□ -0.59
SCN8A-214ENST00000637709 M0R143 59 aa11.34□□□□□ -0.59
SCN8A-214ENST00000637709 HNRNPA3P51991 378 aaKnown RBP11.34□□□□□ -0.59
SCN8A-214ENST00000637709 LINC01545Q5VT33 79 aa11.34□□□□□ -0.59
SCN8A-214ENST00000637709 IFI27L1Q96BM0 104 aa11.34□□□□□ -0.59
SCN8A-214ENST00000637709 UQCR10Q9UDW1 63 aa11.34□□□□□ -0.59
SCN8A-214ENST00000637709 C20orf202A1L168 122 aa11.34□□□□□ -0.59
SCN8A-214ENST00000637709 F5H697 171 aa11.34□□□□□ -0.59
SCN8A-214ENST00000637709 PET117Q6UWS5 81 aa11.34□□□□□ -0.59
SCN8A-214ENST00000637709 AMTNQ6UX39 209 aa11.34□□□□□ -0.59
SCN8A-214ENST00000637709 SCRT2Q9NQ03 307 aa11.34□□□□□ -0.59
SCN8A-214ENST00000637709 NBEAL2Q6ZNJ1 2754 aa11.34□□□□□ -0.59
SCN8A-214ENST00000637709 TRRAPQ9Y4A5 3859 aa11.33□□□□□ -0.59
SCN8A-214ENST00000637709 IGHV3-73A0A0B4J1V6 119 aa11.33□□□□□ -0.6
SCN8A-214ENST00000637709 HINT1P49773 126 aaPredicted RBP11.33□□□□□ -0.6
SCN8A-214ENST00000637709 DPH3P1Q9H4G8 78 aa11.33□□□□□ -0.6
SCN8A-214ENST00000637709 PEMTQ9UBM1 199 aa11.33□□□□□ -0.6
SCN8A-214ENST00000637709 CCL24O00175 119 aa11.32□□□□□ -0.6
SCN8A-214ENST00000637709 TSPOP30536 169 aa11.32□□□□□ -0.6
SCN8A-214ENST00000637709 NSUN5P1Q3KNT7 163 aa11.32□□□□□ -0.6
SCN8A-214ENST00000637709 GOLT1BQ9Y3E0 138 aa11.32□□□□□ -0.6
SCN8A-214ENST00000637709 ATRQ13535 2644 aa11.32□□□□□ -0.6
SCN8A-214ENST00000637709 IGHV3-16A0A0C4DH30 117 aa11.32□□□□□ -0.6
SCN8A-214ENST00000637709 DEFB114Q30KQ6 69 aa11.32□□□□□ -0.6
SCN8A-214ENST00000637709 FOXI2Q6ZQN5 318 aa11.32□□□□□ -0.6
SCN8A-214ENST00000637709 TMEM86BQ8N661 226 aa11.32□□□□□ -0.6
SCN8A-214ENST00000637709 Q8N8P6 123 aa11.32□□□□□ -0.6
SCN8A-214ENST00000637709 AP1S3Q96PC3 154 aa11.32□□□□□ -0.6
SCN8A-214ENST00000637709 NXT2Q9NPJ8 142 aaKnown RBP11.32□□□□□ -0.6
SCN8A-214ENST00000637709 Q6ZVH6 145 aa11.31□□□□□ -0.6
SCN8A-214ENST00000637709 MAP6D1Q9H9H5 199 aa11.31□□□□□ -0.6
SCN8A-214ENST00000637709 CBY3A6NI87 242 aa11.31□□□□□ -0.6
SCN8A-214ENST00000637709 PRSS1P07477 247 aa11.31□□□□□ -0.6
SCN8A-214ENST00000637709 ANKRD39Q53RE8 183 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms