RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 GRIFINA4D1Z8 144 aa12.17□□□□□ -0.46
CLN6-218ENST00000637223 SPXQ9BT56 116 aa12.17□□□□□ -0.46
CLN6-218ENST00000637223 BIN3Q9NQY0 253 aa12.17□□□□□ -0.46
CLN6-218ENST00000637223 KLK5Q9Y337 293 aaPredicted RBP12.17□□□□□ -0.46
CLN6-218ENST00000637223 LYSTQ99698 3801 aa12.17□□□□□ -0.46
CLN6-218ENST00000637223 TRGV2A0A075B6R0 118 aa12.16□□□□□ -0.46
CLN6-218ENST00000637223 C7orf77A4D0Y5 90 aa12.16□□□□□ -0.46
CLN6-218ENST00000637223 S100A4P26447 101 aaKnown RBP12.16□□□□□ -0.46
CLN6-218ENST00000637223 ASIPP42127 132 aa12.16□□□□□ -0.46
CLN6-218ENST00000637223 RPL19P84098 196 aaKnown RBP12.16□□□□□ -0.46
CLN6-218ENST00000637223 OR5I1Q13606 314 aa12.16□□□□□ -0.46
CLN6-218ENST00000637223 LINC01559Q495D7 138 aa12.16□□□□□ -0.46
CLN6-218ENST00000637223 LINC01551Q86U37 167 aa12.16□□□□□ -0.46
CLN6-218ENST00000637223 CTDSP1Q9GZU7 261 aa12.16□□□□□ -0.46
CLN6-218ENST00000637223 IGLL5B9A064 214 aa12.15□□□□□ -0.46
CLN6-218ENST00000637223 MT-ND4LP03901 98 aa12.15□□□□□ -0.46
CLN6-218ENST00000637223 ATP5G1P05496 136 aa12.15□□□□□ -0.46
CLN6-218ENST00000637223 RNASE3P12724 160 aaKnown RBP12.15□□□□□ -0.46
CLN6-218ENST00000637223 RPL23P62829 140 aaKnown RBP12.15□□□□□ -0.46
CLN6-218ENST00000637223 LGALS9BQ3B8N2 356 aa12.15□□□□□ -0.46
CLN6-218ENST00000637223 C9orf85Q96MD7 179 aa12.15□□□□□ -0.46
CLN6-218ENST00000637223 PLECQ15149 4684 aaKnown RBP12.14□□□□□ -0.47
CLN6-218ENST00000637223 F5H768 121 aa12.14□□□□□ -0.47
CLN6-218ENST00000637223 M0R2P5 195 aa12.14□□□□□ -0.47
CLN6-218ENST00000637223 PPP1R2P9O14990 202 aa12.14□□□□□ -0.47
CLN6-218ENST00000637223 OCC1Q8TAD7 63 aa12.14□□□□□ -0.47
CLN6-218ENST00000637223 ANAPC16Q96DE5 110 aa12.14□□□□□ -0.47
CLN6-218ENST00000637223 HYDINQ4G0P3 5121 aa12.13□□□□□ -0.47
CLN6-218ENST00000637223 H3BVH4 76 aa12.13□□□□□ -0.47
CLN6-218ENST00000637223 K7EN84 100 aa12.13□□□□□ -0.47
CLN6-218ENST00000637223 IGHV3-53P01767 116 aa12.13□□□□□ -0.47
CLN6-218ENST00000637223 ZNF575Q86XF7 245 aa12.13□□□□□ -0.47
CLN6-218ENST00000637223 DAZAP1Q96EP5 407 aaKnown RBP12.13□□□□□ -0.47
CLN6-218ENST00000637223 C19orf71A6NCJ1 209 aa12.12□□□□□ -0.47
CLN6-218ENST00000637223 ADIRFQ15847 76 aa12.12□□□□□ -0.47
CLN6-218ENST00000637223 ATRAIDQ6UW56 229 aa12.12□□□□□ -0.47
CLN6-218ENST00000637223 RASL10AQ92737 203 aa12.12□□□□□ -0.47
CLN6-218ENST00000637223 ISOC2Q96AB3 205 aa12.12□□□□□ -0.47
CLN6-218ENST00000637223 RPS10P5Q9NQ39 176 aa12.12□□□□□ -0.47
CLN6-218ENST00000637223 SMCO4Q9NRQ5 59 aa12.12□□□□□ -0.47
CLN6-218ENST00000637223 IGHV4-4A0A075B6R2 117 aa12.11□□□□□ -0.47
CLN6-218ENST00000637223 ARMS2P0C7Q2 107 aa12.11□□□□□ -0.47
CLN6-218ENST00000637223 HOXA5P20719 270 aa12.11□□□□□ -0.47
CLN6-218ENST00000637223 ZNF876PQ49A33 203 aa12.11□□□□□ -0.47
CLN6-218ENST00000637223 DNLZQ5SXM8 178 aa12.11□□□□□ -0.47
CLN6-218ENST00000637223 C18orf15Q96N68 181 aa12.11□□□□□ -0.47
CLN6-218ENST00000637223 IL36BQ9NZH7 164 aa12.11□□□□□ -0.47
CLN6-218ENST00000637223 P01737 135 aa12.1□□□□□ -0.47
CLN6-218ENST00000637223 TMEM88Q6PEY1 159 aa12.1□□□□□ -0.47
CLN6-218ENST00000637223 FAM231DQ6ZW35 169 aa12.1□□□□□ -0.47
CLN6-218ENST00000637223 OR2D3Q8NGH3 330 aa12.1□□□□□ -0.47
CLN6-218ENST00000637223 RNASE7Q9H1E1 156 aaKnown RBP12.1□□□□□ -0.47
CLN6-218ENST00000637223 NUDT10Q8NFP7 164 aa12.09□□□□□ -0.47
CLN6-218ENST00000637223 NUDT11Q96G61 164 aa12.09□□□□□ -0.47
CLN6-218ENST00000637223 IMMP2LQ96T52 175 aa12.09□□□□□ -0.47
CLN6-218ENST00000637223 OSTCQ9NRP0 149 aa12.09□□□□□ -0.47
CLN6-218ENST00000637223 CXCL1P09341 107 aa12.08□□□□□ -0.48
CLN6-218ENST00000637223 GZMBP10144 247 aa12.08□□□□□ -0.48
CLN6-218ENST00000637223 POM121L12Q8N7R1 296 aa12.08□□□□□ -0.48
CLN6-218ENST00000637223 C15orf54Q8N8G6 183 aa12.08□□□□□ -0.48
CLN6-218ENST00000637223 SFRP2Q96HF1 295 aa12.08□□□□□ -0.48
CLN6-218ENST00000637223 ZNF479Q96JC4 524 aa12.08□□□□□ -0.48
CLN6-218ENST00000637223 NDUFAF3Q9BU61 184 aa12.08□□□□□ -0.48
CLN6-218ENST00000637223 APLNQ9ULZ1 77 aa12.08□□□□□ -0.48
CLN6-218ENST00000637223 PHLDA3Q9Y5J5 127 aa12.08□□□□□ -0.48
CLN6-218ENST00000637223 TRAV4A0A0B4J268 109 aa12.07□□□□□ -0.48
CLN6-218ENST00000637223 RNF212Q495C1 297 aa12.07□□□□□ -0.48
CLN6-218ENST00000637223 OR4C5Q8NGB2 326 aa12.07□□□□□ -0.48
CLN6-218ENST00000637223 PTH2Q96A98 100 aa12.07□□□□□ -0.48
CLN6-218ENST00000637223 BTF3L4Q96K17 158 aa12.07□□□□□ -0.48
CLN6-218ENST00000637223 FAM210BQ96KR6 192 aa12.07□□□□□ -0.48
CLN6-218ENST00000637223 SCRT2Q9NQ03 307 aa12.07□□□□□ -0.48
CLN6-218ENST00000637223 TRAV26-1A0A087WT03 109 aa12.06□□□□□ -0.48
CLN6-218ENST00000637223 MUC21A0A0G2JKD1 596 aa12.06□□□□□ -0.48
CLN6-218ENST00000637223 A0A0J9YY99 117 aa12.06□□□□□ -0.48
CLN6-218ENST00000637223 MUC21A0A140T8X8 626 aa12.06□□□□□ -0.48
CLN6-218ENST00000637223 RPS20P60866 119 aaKnown RBP12.06□□□□□ -0.48
CLN6-218ENST00000637223 DMRTA1Q5VZB9 504 aa12.06□□□□□ -0.48
CLN6-218ENST00000637223 OR10G8Q8NGN5 311 aa12.06□□□□□ -0.48
CLN6-218ENST00000637223 RPP21Q9H633 154 aaKnown RBP12.06□□□□□ -0.48
CLN6-218ENST00000637223 M0R381 172 aa12.05□□□□□ -0.48
CLN6-218ENST00000637223 RS1O15537 224 aa12.05□□□□□ -0.48
CLN6-218ENST00000637223 SCO1O75880 301 aa12.05□□□□□ -0.48
CLN6-218ENST00000637223 MED14OSP0DP75 135 aa12.05□□□□□ -0.48
CLN6-218ENST00000637223 TCTAP57738 103 aa12.05□□□□□ -0.48
CLN6-218ENST00000637223 ERVFC1-1P60608 527 aa12.05□□□□□ -0.48
CLN6-218ENST00000637223 FHL2Q14192 279 aa12.05□□□□□ -0.48
CLN6-218ENST00000637223 SYT8Q8NBV8 401 aa12.05□□□□□ -0.48
CLN6-218ENST00000637223 TPPP3Q9BW30 176 aa12.05□□□□□ -0.48
CLN6-218ENST00000637223 TRAV9-1A0A075B6T8 112 aa12.04□□□□□ -0.48
CLN6-218ENST00000637223 TRGV4A0A0C4DH28 118 aa12.04□□□□□ -0.48
CLN6-218ENST00000637223 XKRY2A2RUG3 117 aa12.04□□□□□ -0.48
CLN6-218ENST00000637223 SNAI2O43623 268 aa12.04□□□□□ -0.48
CLN6-218ENST00000637223 GATCO43716 136 aaKnown RBP12.04□□□□□ -0.48
CLN6-218ENST00000637223 SSTP61278 116 aa12.04□□□□□ -0.48
CLN6-218ENST00000637223 CT83Q5H943 113 aa12.04□□□□□ -0.48
CLN6-218ENST00000637223 CFAP126Q5VTH2 177 aa12.04□□□□□ -0.48
CLN6-218ENST00000637223 ZFP82Q8N141 532 aa12.04□□□□□ -0.48
CLN6-218ENST00000637223 OR10AG1Q8NH19 301 aa12.04□□□□□ -0.48
CLN6-218ENST00000637223 JPT2Q9H910 190 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms