RNA–Protein interactions for RNA: ENST00000636845.1

RYR3-223, Transcript of ryanodine receptor 3, human

TSL 5

Gene RYR3, Length 2,973 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RYR3-223	ENST00000636845	TRAV25	A0A0B4J276	109 aa		4.12	□□□□□ -1.75
RYR3-223	ENST00000636845	IGHV1-3	A0A0C4DH29	117 aa		4.12	□□□□□ -1.75
RYR3-223	ENST00000636845		J3QQQ9	107 aa		4.12	□□□□□ -1.75
RYR3-223	ENST00000636845	IGHV3-23	P01764	117 aa		4.12	□□□□□ -1.75
RYR3-223	ENST00000636845	IGHV1-8	P0DP01	117 aa		4.12	□□□□□ -1.75
RYR3-223	ENST00000636845	PMVK	Q15126	192 aa		4.12	□□□□□ -1.75
RYR3-223	ENST00000636845	TMEM105	Q8N8V8	129 aa		4.12	□□□□□ -1.75
RYR3-223	ENST00000636845	C8orf31	Q8N9H6	132 aa		4.12	□□□□□ -1.75
RYR3-223	ENST00000636845	ZNF256	Q9Y2P7	627 aa	Predicted RBP	4.12	□□□□□ -1.75
RYR3-223	ENST00000636845	TRGV11	A0A075B6L2	103 aa		4.12	□□□□□ -1.75
RYR3-223	ENST00000636845	PRAC2	D3DTV9	90 aa		4.12	□□□□□ -1.75
RYR3-223	ENST00000636845	CRYGB	P07316	175 aa		4.12	□□□□□ -1.75
RYR3-223	ENST00000636845		P0DMU3	169 aa		4.12	□□□□□ -1.75
RYR3-223	ENST00000636845	FAM231A	P0DMU4	169 aa		4.12	□□□□□ -1.75
RYR3-223	ENST00000636845	FAM231C	P0DMU5	169 aa		4.12	□□□□□ -1.75
RYR3-223	ENST00000636845	COX7A1	P24310	79 aa		4.12	□□□□□ -1.75
RYR3-223	ENST00000636845	LCE2A	Q5TA79	106 aa	Predicted RBP	4.12	□□□□□ -1.75
RYR3-223	ENST00000636845	ZNF575	Q86XF7	245 aa		4.12	□□□□□ -1.75
RYR3-223	ENST00000636845	RNF182	Q8N6D2	247 aa		4.12	□□□□□ -1.75
RYR3-223	ENST00000636845	DEFB104A	Q8WTQ1	72 aa		4.12	□□□□□ -1.75
RYR3-223	ENST00000636845	RPL39L	Q96EH5	51 aa	Known RBP	4.12	□□□□□ -1.75
RYR3-223	ENST00000636845	CEP250	Q9BV73	2442 aa		4.12	□□□□□ -1.75
RYR3-223	ENST00000636845	LOC107984640	A0A0U1RRK4	108 aa		4.11	□□□□□ -1.75
RYR3-223	ENST00000636845	OOSP1	A8MZH6	123 aa		4.11	□□□□□ -1.75
RYR3-223	ENST00000636845	NPFF	O15130	113 aa		4.11	□□□□□ -1.75
RYR3-223	ENST00000636845	PRSS2	P07478	247 aa		4.11	□□□□□ -1.75
RYR3-223	ENST00000636845	CD59	P13987	128 aa		4.11	□□□□□ -1.75
RYR3-223	ENST00000636845	PMS2CL	Q68D20	193 aa		4.11	□□□□□ -1.75
RYR3-223	ENST00000636845	LYPD2	Q6UXB3	125 aa		4.11	□□□□□ -1.75
RYR3-223	ENST00000636845	C14orf178	Q8N769	122 aa	Predicted RBP	4.11	□□□□□ -1.75
RYR3-223	ENST00000636845	DUX3	Q96PT4	197 aa		4.11	□□□□□ -1.75
RYR3-223	ENST00000636845	LINC01587	Q99440	93 aa		4.11	□□□□□ -1.75
RYR3-223	ENST00000636845	C11orf21	Q9P2W6	132 aa		4.11	□□□□□ -1.75
RYR3-223	ENST00000636845		A0A0B4J2C4	111 aa		4.11	□□□□□ -1.75
RYR3-223	ENST00000636845		J3KT08	172 aa		4.11	□□□□□ -1.75
RYR3-223	ENST00000636845	TP53TG1	Q9Y2A0	90 aa		4.11	□□□□□ -1.75
RYR3-223	ENST00000636845	PHLDA3	Q9Y5J5	127 aa		4.11	□□□□□ -1.75
RYR3-223	ENST00000636845	PRRC2C	Q9Y520	2896 aa	Known RBP	4.11	□□□□□ -1.75
RYR3-223	ENST00000636845	FREM2	Q5SZK8	3169 aa		4.11	□□□□□ -1.75
RYR3-223	ENST00000636845	IGHV3-64	A0A075B6Q5	118 aa		4.11	□□□□□ -1.75
RYR3-223	ENST00000636845	IGHV7-4-1	A0A0J9YVY3	117 aa		4.11	□□□□□ -1.75
RYR3-223	ENST00000636845	SMIM9	A6NGZ8	99 aa		4.11	□□□□□ -1.75
RYR3-223	ENST00000636845	C17orf100	A8MU93	164 aa		4.11	□□□□□ -1.75
RYR3-223	ENST00000636845	NDUFA7	O95182	113 aa		4.11	□□□□□ -1.75
RYR3-223	ENST00000636845	PPP1R17	O96001	155 aa		4.11	□□□□□ -1.75
RYR3-223	ENST00000636845	ELANE	P08246	267 aa		4.11	□□□□□ -1.75
RYR3-223	ENST00000636845	LOX	P28300	417 aa	Predicted RBP	4.11	□□□□□ -1.75
RYR3-223	ENST00000636845	TSPEAR-AS2	P59090	65 aa		4.11	□□□□□ -1.75
RYR3-223	ENST00000636845	SEC61G	P60059	68 aa		4.11	□□□□□ -1.75
RYR3-223	ENST00000636845	ATP1A1-AS1	Q5TC04	95 aa		4.11	□□□□□ -1.75
RYR3-223	ENST00000636845	ZNF474	Q6S9Z5	364 aa	Predicted RBP	4.11	□□□□□ -1.75
RYR3-223	ENST00000636845	ASCL5	Q7RTU5	278 aa		4.11	□□□□□ -1.75
RYR3-223	ENST00000636845	MUSTN1	Q8IVN3	82 aa		4.11	□□□□□ -1.75
RYR3-223	ENST00000636845	TMEM263	Q8WUH6	116 aa	Known RBP	4.11	□□□□□ -1.75
RYR3-223	ENST00000636845	AGPAT4-IT1	Q9H0P7	198 aa		4.11	□□□□□ -1.75
RYR3-223	ENST00000636845	DPH3P1	Q9H4G8	78 aa		4.11	□□□□□ -1.75
RYR3-223	ENST00000636845	PKDREJ	Q9NTG1	2253 aa		4.1	□□□□□ -1.75
RYR3-223	ENST00000636845	IGHV3OR16-13	A0A075B7E8	117 aa		4.1	□□□□□ -1.75
RYR3-223	ENST00000636845	IGHV3-74	A0A0B4J1X5	117 aa		4.1	□□□□□ -1.75
RYR3-223	ENST00000636845	IGHV3-66	A0A0C4DH42	116 aa		4.1	□□□□□ -1.75
RYR3-223	ENST00000636845		M0R2P5	195 aa		4.1	□□□□□ -1.75
RYR3-223	ENST00000636845	SPRY2	O43597	315 aa		4.1	□□□□□ -1.75
RYR3-223	ENST00000636845	IGHG4	P01861	327 aa		4.1	□□□□□ -1.75
RYR3-223	ENST00000636845	HERVK_113	P63121	156 aa		4.1	□□□□□ -1.75
RYR3-223	ENST00000636845	ZNF672	Q499Z4	452 aa	Predicted RBP	4.1	□□□□□ -1.75
RYR3-223	ENST00000636845	PRSS33	Q8NF86	280 aa		4.1	□□□□□ -1.75
RYR3-223	ENST00000636845	SPTBN5	Q9NRC6	3674 aa	Known RBP	4.1	□□□□□ -1.75
RYR3-223	ENST00000636845	IGLV4-69	A0A075B6H9	119 aa		4.1	□□□□□ -1.75
RYR3-223	ENST00000636845	FAM240A	A0A1B0GVK7	77 aa		4.1	□□□□□ -1.75
RYR3-223	ENST00000636845	BUB1B-PAK6	H3BSN5	160 aa		4.1	□□□□□ -1.75
RYR3-223	ENST00000636845		H3BT86	120 aa		4.1	□□□□□ -1.75
RYR3-223	ENST00000636845	TRIAP1	O43715	76 aa		4.1	□□□□□ -1.75
RYR3-223	ENST00000636845	C3orf22	Q8N5N4	141 aa		4.1	□□□□□ -1.75
RYR3-223	ENST00000636845	OR13C6P	Q8NH95	151 aa		4.1	□□□□□ -1.75
RYR3-223	ENST00000636845	SMAD5-AS1	Q9Y6J3	95 aa		4.1	□□□□□ -1.75
RYR3-223	ENST00000636845	TRBV30	A0A0K0K1B3	111 aa		4.09	□□□□□ -1.75
RYR3-223	ENST00000636845	TRBV7-7	A0A0K0K1E9	115 aa		4.09	□□□□□ -1.75
RYR3-223	ENST00000636845	RBAKDN	A6NC62	111 aa		4.09	□□□□□ -1.75
RYR3-223	ENST00000636845	UQCRQ	O14949	82 aa		4.09	□□□□□ -1.75
RYR3-223	ENST00000636845	IGHG3	P01860	377 aa		4.09	□□□□□ -1.75
RYR3-223	ENST00000636845	CRYGD	P07320	174 aa		4.09	□□□□□ -1.75
RYR3-223	ENST00000636845	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	4.09	□□□□□ -1.75
RYR3-223	ENST00000636845	PSMG3-AS1	Q96PY0	264 aa		4.09	□□□□□ -1.75
RYR3-223	ENST00000636845	MALRD1	Q5VYJ5	2156 aa		4.09	□□□□□ -1.75
RYR3-223	ENST00000636845	IGHV4-4	A0A075B6R2	117 aa		4.09	□□□□□ -1.75
RYR3-223	ENST00000636845	IGHV1-69D	A0A0B4J2H0	117 aa		4.09	□□□□□ -1.75
RYR3-223	ENST00000636845	TMEM89	A2RUT3	159 aa		4.09	□□□□□ -1.75
RYR3-223	ENST00000636845	MBD3L4	A6NDZ8	208 aa	Predicted RBP	4.09	□□□□□ -1.75
RYR3-223	ENST00000636845	MBD3L3	A6NE82	208 aa	Predicted RBP	4.09	□□□□□ -1.75
RYR3-223	ENST00000636845		F5H697	171 aa		4.09	□□□□□ -1.75
RYR3-223	ENST00000636845	TMEM178B	H3BS89	294 aa		4.09	□□□□□ -1.75
RYR3-223	ENST00000636845		H7C423	109 aa		4.09	□□□□□ -1.75
RYR3-223	ENST00000636845	NBR2	O15453	112 aa		4.09	□□□□□ -1.75
RYR3-223	ENST00000636845	LINC00527	Q9UJ94	153 aa		4.09	□□□□□ -1.75
RYR3-223	ENST00000636845	IGHV3-49	A0A0A0MS15	119 aa		4.08	□□□□□ -1.76
RYR3-223	ENST00000636845	TRAV8-3	A0A0A6YYJ7	113 aa		4.08	□□□□□ -1.76
RYR3-223	ENST00000636845	ZNF22	P17026	224 aa	Predicted RBP	4.08	□□□□□ -1.76
RYR3-223	ENST00000636845	RPL39	P62891	51 aa	Known RBP	4.08	□□□□□ -1.76
RYR3-223	ENST00000636845	LY6D	Q14210	128 aa		4.08	□□□□□ -1.76
RYR3-223	ENST00000636845	GAGE2A	Q6NT46	116 aa		4.08	□□□□□ -1.76

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