RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 ALKAL2Q6UX46 152 aa10.8□□□□□ -0.68
LINC00339-209ENST00000635450 ZNF575Q86XF7 245 aa10.8□□□□□ -0.68
LINC00339-209ENST00000635450 BAGE2Q86Y30 109 aa10.8□□□□□ -0.68
LINC00339-209ENST00000635450 NHLRC2Q8NBF2 726 aa10.8□□□□□ -0.68
LINC00339-209ENST00000635450 ZNRF2Q8NHG8 242 aa10.8□□□□□ -0.68
LINC00339-209ENST00000635450 C9orf85Q96MD7 179 aa10.8□□□□□ -0.68
LINC00339-209ENST00000635450 LINC00588Q9Y4M8 146 aa10.8□□□□□ -0.68
LINC00339-209ENST00000635450 ICOSQ9Y6W8 199 aa10.8□□□□□ -0.68
LINC00339-209ENST00000635450 M0R036 132 aa10.79□□□□□ -0.68
LINC00339-209ENST00000635450 RNASE3P12724 160 aaKnown RBP10.79□□□□□ -0.68
LINC00339-209ENST00000635450 NKX2-5P52952 324 aaPredicted RBP10.79□□□□□ -0.68
LINC00339-209ENST00000635450 CRYBA4P53673 196 aa10.79□□□□□ -0.68
LINC00339-209ENST00000635450 MEF2BQ02080 365 aaPredicted RBP10.79□□□□□ -0.68
LINC00339-209ENST00000635450 A0A096LPF7 62 aa10.78□□□□□ -0.68
LINC00339-209ENST00000635450 KRBOX1C9JBD0 128 aa10.78□□□□□ -0.68
LINC00339-209ENST00000635450 TAGLN2P37802 199 aaKnown RBP10.78□□□□□ -0.68
LINC00339-209ENST00000635450 BLOC1S1P78537 153 aa10.78□□□□□ -0.68
LINC00339-209ENST00000635450 PCNPQ8WW12 178 aaKnown RBP10.78□□□□□ -0.68
LINC00339-209ENST00000635450 C11orf52Q96A22 123 aa10.78□□□□□ -0.68
LINC00339-209ENST00000635450 PTH2Q96A98 100 aa10.78□□□□□ -0.68
LINC00339-209ENST00000635450 PCLOQ9Y6V0 5065 aa10.78□□□□□ -0.68
LINC00339-209ENST00000635450 PDE6DO43924 150 aa10.77□□□□□ -0.69
LINC00339-209ENST00000635450 CIDEAO60543 219 aa10.77□□□□□ -0.69
LINC00339-209ENST00000635450 BCL2P10415 239 aa10.77□□□□□ -0.69
LINC00339-209ENST00000635450 RPL35P42766 123 aaKnown RBP10.77□□□□□ -0.69
LINC00339-209ENST00000635450 MRPL23Q16540 153 aaKnown RBP10.77□□□□□ -0.69
LINC00339-209ENST00000635450 LINC01559Q495D7 138 aa10.77□□□□□ -0.69
LINC00339-209ENST00000635450 ZNF506Q5JVG8 444 aa10.77□□□□□ -0.69
LINC00339-209ENST00000635450 C1orf134Q5TEV5 83 aa10.77□□□□□ -0.69
LINC00339-209ENST00000635450 KRTAP1-5Q9BYS1 174 aa10.77□□□□□ -0.69
LINC00339-209ENST00000635450 IL36BQ9NZH7 164 aa10.77□□□□□ -0.69
LINC00339-209ENST00000635450 LRP1BQ9NZR2 4599 aa10.76□□□□□ -0.69
LINC00339-209ENST00000635450 HSPG2P98160 4391 aa10.76□□□□□ -0.69
LINC00339-209ENST00000635450 NBDYA0A0U1RRE5 68 aa10.76□□□□□ -0.69
LINC00339-209ENST00000635450 PGPEP1LA6NFU8 196 aa10.76□□□□□ -0.69
LINC00339-209ENST00000635450 H3BVH4 76 aa10.76□□□□□ -0.69
LINC00339-209ENST00000635450 TNP2Q05952 138 aa10.76□□□□□ -0.69
LINC00339-209ENST00000635450 ESRGQ1W209 222 aa10.76□□□□□ -0.69
LINC00339-209ENST00000635450 DNLZQ5SXM8 178 aa10.76□□□□□ -0.69
LINC00339-209ENST00000635450 VAX2Q9UIW0 290 aa10.76□□□□□ -0.69
LINC00339-209ENST00000635450 TMSB15BA0A087X1C1 80 aa10.75□□□□□ -0.69
LINC00339-209ENST00000635450 GRIFINA4D1Z8 144 aa10.75□□□□□ -0.69
LINC00339-209ENST00000635450 RS1O15537 224 aa10.75□□□□□ -0.69
LINC00339-209ENST00000635450 ARMS2P0C7Q2 107 aa10.75□□□□□ -0.69
LINC00339-209ENST00000635450 CFAP126Q5VTH2 177 aa10.75□□□□□ -0.69
LINC00339-209ENST00000635450 PRR27Q6MZM9 219 aa10.75□□□□□ -0.69
LINC00339-209ENST00000635450 SYT8Q8NBV8 401 aa10.75□□□□□ -0.69
LINC00339-209ENST00000635450 MLST8Q9BVC4 326 aa10.75□□□□□ -0.69
LINC00339-209ENST00000635450 MED9Q9NWA0 146 aa10.75□□□□□ -0.69
LINC00339-209ENST00000635450 BOLA1Q9Y3E2 137 aa10.75□□□□□ -0.69
LINC00339-209ENST00000635450 RYR1P21817 5038 aa10.74□□□□□ -0.69
LINC00339-209ENST00000635450 A8MWV9 139 aa10.74□□□□□ -0.69
LINC00339-209ENST00000635450 GYPEP15421 78 aa10.74□□□□□ -0.69
LINC00339-209ENST00000635450 SRIP30626 198 aa10.74□□□□□ -0.69
LINC00339-209ENST00000635450 PIK3CD-AS1Q5SR53 167 aa10.74□□□□□ -0.69
LINC00339-209ENST00000635450 DERL1Q9BUN8 251 aa10.74□□□□□ -0.69
LINC00339-209ENST00000635450 MRPS16Q9Y3D3 137 aaKnown RBP10.74□□□□□ -0.69
LINC00339-209ENST00000635450 PHLDA3Q9Y5J5 127 aa10.74□□□□□ -0.69
LINC00339-209ENST00000635450 K7EQD1 137 aa10.73□□□□□ -0.69
LINC00339-209ENST00000635450 MGST1P10620 155 aaKnown RBP10.73□□□□□ -0.69
LINC00339-209ENST00000635450 GATA1P15976 413 aaPredicted RBP10.73□□□□□ -0.69
LINC00339-209ENST00000635450 GNG4P50150 75 aa10.73□□□□□ -0.69
LINC00339-209ENST00000635450 CENPWQ5EE01 88 aa10.73□□□□□ -0.69
LINC00339-209ENST00000635450 NEGR1Q7Z3B1 354 aa10.73□□□□□ -0.69
LINC00339-209ENST00000635450 UPK3BQ9BT76 320 aa10.73□□□□□ -0.69
LINC00339-209ENST00000635450 Q9H8V8 135 aa10.73□□□□□ -0.69
LINC00339-209ENST00000635450 IGHV3-73A0A0B4J1V6 119 aa10.72□□□□□ -0.69
LINC00339-209ENST00000635450 MED14OSP0DP75 135 aa10.72□□□□□ -0.69
LINC00339-209ENST00000635450 SOHLH1Q5JUK2 328 aa10.72□□□□□ -0.69
LINC00339-209ENST00000635450 DAZAP1Q96EP5 407 aaKnown RBP10.72□□□□□ -0.69
LINC00339-209ENST00000635450 SMIM12Q96EX1 92 aa10.72□□□□□ -0.69
LINC00339-209ENST00000635450 PRADC1Q9BSG0 188 aa10.72□□□□□ -0.69
LINC00339-209ENST00000635450 RAB19A4D1S5 217 aa10.71□□□□□ -0.69
LINC00339-209ENST00000635450 CXCL1P09341 107 aa10.71□□□□□ -0.69
LINC00339-209ENST00000635450 RHOHQ15669 191 aa10.71□□□□□ -0.69
LINC00339-209ENST00000635450 SH2D6Q7Z4S9 175 aa10.71□□□□□ -0.69
LINC00339-209ENST00000635450 ZFP82Q8N141 532 aa10.71□□□□□ -0.69
LINC00339-209ENST00000635450 C6orf223Q8N319 242 aa10.71□□□□□ -0.69
LINC00339-209ENST00000635450 BIN3Q9NQY0 253 aa10.71□□□□□ -0.69
LINC00339-209ENST00000635450 TRBV6-4A0A1B0GX49 114 aa10.7□□□□□ -0.7
LINC00339-209ENST00000635450 RBFOX3A6NFN3 312 aa10.7□□□□□ -0.7
LINC00339-209ENST00000635450 RPL19P84098 196 aaKnown RBP10.7□□□□□ -0.7
LINC00339-209ENST00000635450 DMRTA1Q5VZB9 504 aa10.7□□□□□ -0.7
LINC00339-209ENST00000635450 ZFP2Q6ZN57 461 aa10.7□□□□□ -0.7
LINC00339-209ENST00000635450 SLC25A29Q8N8R3 303 aa10.7□□□□□ -0.7
LINC00339-209ENST00000635450 LYPD6BQ8NI32 183 aa10.7□□□□□ -0.7
LINC00339-209ENST00000635450 PARLQ9H300 379 aa10.7□□□□□ -0.7
LINC00339-209ENST00000635450 SCRT2Q9NQ03 307 aa10.7□□□□□ -0.7
LINC00339-209ENST00000635450 DNAH5Q8TE73 4624 aa10.7□□□□□ -0.7
LINC00339-209ENST00000635450 APOBP04114 4563 aaKnown RBP10.69□□□□□ -0.7
LINC00339-209ENST00000635450 M0R381 172 aa10.69□□□□□ -0.7
LINC00339-209ENST00000635450 TTC32Q5I0X7 151 aa10.69□□□□□ -0.7
LINC00339-209ENST00000635450 LYPD5Q6UWN5 251 aa10.69□□□□□ -0.7
LINC00339-209ENST00000635450 KRTAP4-5Q9BYR2 181 aa10.69□□□□□ -0.7
LINC00339-209ENST00000635450 LOC100131303A0A0U1RQF7 123 aa10.68□□□□□ -0.7
LINC00339-209ENST00000635450 RHODO00212 210 aa10.68□□□□□ -0.7
LINC00339-209ENST00000635450 SIVA1O15304 175 aa10.68□□□□□ -0.7
LINC00339-209ENST00000635450 IGLV2-8P01709 118 aa10.68□□□□□ -0.7
LINC00339-209ENST00000635450 JPT2Q9H910 190 aa10.68□□□□□ -0.7
LINC00339-209ENST00000635450 ABCA13Q86UQ4 5058 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms