RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 FOXI2Q6ZQN5 318 aa1.46□□□□□ -2.18
SMARCB1-208ENST00000634926 SLC25A29Q8N8R3 303 aa1.46□□□□□ -2.18
SMARCB1-208ENST00000634926 C15orf53Q8NAA6 179 aa1.46□□□□□ -2.18
SMARCB1-208ENST00000634926 GPR146Q96CH1 333 aa1.46□□□□□ -2.18
SMARCB1-208ENST00000634926 METTL26Q96S19 204 aa1.46□□□□□ -2.18
SMARCB1-208ENST00000634926 SCN3BQ9NY72 215 aa1.46□□□□□ -2.18
SMARCB1-208ENST00000634926 FKBP11Q9NYL4 201 aa1.46□□□□□ -2.18
SMARCB1-208ENST00000634926 RABAC1Q9UI14 185 aa1.46□□□□□ -2.18
SMARCB1-208ENST00000634926 PRO0628Q9UI54 55 aa1.46□□□□□ -2.18
SMARCB1-208ENST00000634926 LINC00588Q9Y4M8 146 aa1.46□□□□□ -2.18
SMARCB1-208ENST00000634926 IGLV4-60A0A075B6I1 120 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 TRAV8-2A0A0B4J237 113 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 MEIS3P1A6NDR6 274 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 ISLRO14498 428 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 SNAPC5O75971 98 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 CDS2O95674 445 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 PMP2P02689 132 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 PRM2P04554 102 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 SPART-AS1P0CW21 52 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 SLC25A4P12235 298 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 NPPCP23582 126 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 NPY1RP25929 384 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 PSMB9P28065 219 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 OR10J1P30954 320 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 RCVRNP35243 200 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 HTR2BP41595 481 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 HSPA13P48723 471 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 SPCS3P61009 180 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 SNRPD3P62318 126 aaKnown RBP1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 SUPT4H1P63272 117 aaKnown RBP1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 DHRS2Q13268 280 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 PMVKQ15126 192 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 SPINK9Q5DT21 86 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 TMEM69Q5SWH9 247 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 C1orf194Q5T5A4 169 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 Q5VSD8 79 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 SPATA31B1PQ5VZV4 182 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 IZUMO2Q6UXV1 221 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 Q6ZSA8 131 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 SPATA12Q7Z6I5 190 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 MRPL52Q86TS9 123 aaKnown RBP1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 SELENOHQ8IZQ5 122 aaKnown RBP1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 ORMDL3Q8N138 153 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 LYPD1Q8N2G4 141 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 LINC00337Q8N6G1 96 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 SPANXA2-OT1Q8N9U9 137 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 OR5H2Q8NGV7 314 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 RNASEH2CQ8TDP1 164 aaKnown RBP1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 ORAOV1Q8WV07 137 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 YIPF6Q96EC8 236 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 SMIM8Q96KF7 97 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 IGF2BP2-AS1Q96M15 143 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 TMEM222Q9H0R3 208 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 SLC35B3Q9H1N7 401 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 CBY1Q9Y3M2 126 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 TMEM56-RWDD3S4R434 201 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 MUC2Q02817 5179 aa1.45□□□□□ -2.18
SMARCB1-208ENST00000634926 TRAV30A0A087WSZ9 112 aa1.44□□□□□ -2.18
SMARCB1-208ENST00000634926 C3orf85A0A1B0GTC6 90 aa1.44□□□□□ -2.18
SMARCB1-208ENST00000634926 CRYM-AS1A6NIL9 109 aa1.44□□□□□ -2.18
SMARCB1-208ENST00000634926 A8MWL6 223 aa1.44□□□□□ -2.18
SMARCB1-208ENST00000634926 H3BNG1 76 aa1.44□□□□□ -2.18
SMARCB1-208ENST00000634926 K7EPK0 472 aa1.44□□□□□ -2.18
SMARCB1-208ENST00000634926 GSTZ1O43708 216 aaPredicted RBP1.44□□□□□ -2.18
SMARCB1-208ENST00000634926 PITX3O75364 302 aa1.44□□□□□ -2.18
SMARCB1-208ENST00000634926 IFNA10P01566 189 aa1.44□□□□□ -2.18
SMARCB1-208ENST00000634926 CD3DP04234 171 aa1.44□□□□□ -2.18
SMARCB1-208ENST00000634926 IL4P05112 153 aa1.44□□□□□ -2.18
SMARCB1-208ENST00000634926 HLA-DMAP28067 261 aa1.44□□□□□ -2.18
SMARCB1-208ENST00000634926 ETV6P41212 452 aa1.44□□□□□ -2.18
SMARCB1-208ENST00000634926 EIF2B2P49770 351 aaKnown RBP1.44□□□□□ -2.18
SMARCB1-208ENST00000634926 AP2S1P53680 142 aaPredicted RBP1.44□□□□□ -2.18
SMARCB1-208ENST00000634926 PIGPP57054 158 aa1.44□□□□□ -2.18
SMARCB1-208ENST00000634926 LINC00315P59091 139 aa1.44□□□□□ -2.18
SMARCB1-208ENST00000634926 ERHP84090 104 aaKnown RBP1.44□□□□□ -2.18
SMARCB1-208ENST00000634926 PSG9Q00887 426 aa1.44□□□□□ -2.18
SMARCB1-208ENST00000634926 ZNF90Q03938 601 aa1.44□□□□□ -2.18
SMARCB1-208ENST00000634926 CD164Q04900 197 aa1.44□□□□□ -2.18
SMARCB1-208ENST00000634926 SURF2Q15527 256 aaPredicted RBP1.44□□□□□ -2.18
SMARCB1-208ENST00000634926 COX19Q49B96 90 aa1.44□□□□□ -2.18
SMARCB1-208ENST00000634926 LUZP6Q538Z0 58 aa1.44□□□□□ -2.18
SMARCB1-208ENST00000634926 FAM78BQ5VT40 261 aa1.44□□□□□ -2.18
SMARCB1-208ENST00000634926 SAMD13Q5VXD3 122 aa1.44□□□□□ -2.18
SMARCB1-208ENST00000634926 LPCAT3Q6P1A2 487 aa1.44□□□□□ -2.18
SMARCB1-208ENST00000634926 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.44□□□□□ -2.18
SMARCB1-208ENST00000634926 BAP18Q8IXM2 172 aa1.44□□□□□ -2.18
SMARCB1-208ENST00000634926 SLC35G3Q8N808 338 aa1.44□□□□□ -2.18
SMARCB1-208ENST00000634926 OR13C8Q8NGS7 320 aa1.44□□□□□ -2.18
SMARCB1-208ENST00000634926 RBPMSQ93062 196 aaKnown RBP1.44□□□□□ -2.18
SMARCB1-208ENST00000634926 CNBD2Q96M20 576 aa1.44□□□□□ -2.18
SMARCB1-208ENST00000634926 TRGV9Q99603 122 aa1.44□□□□□ -2.18
SMARCB1-208ENST00000634926 RTBDNQ9BSG5 229 aaPredicted RBP1.44□□□□□ -2.18
SMARCB1-208ENST00000634926 CCDC90BQ9GZT6 254 aa1.44□□□□□ -2.18
SMARCB1-208ENST00000634926 IFT46Q9NQC8 304 aa1.44□□□□□ -2.18
SMARCB1-208ENST00000634926 DIABLOQ9NR28 239 aa1.44□□□□□ -2.18
SMARCB1-208ENST00000634926 DOK5Q9P104 306 aa1.44□□□□□ -2.18
SMARCB1-208ENST00000634926 SSR3Q9UNL2 185 aa1.44□□□□□ -2.18
SMARCB1-208ENST00000634926 MRPS16Q9Y3D3 137 aaKnown RBP1.44□□□□□ -2.18
SMARCB1-208ENST00000634926 IGKV2-28A0A075B6P5 120 aa1.43□□□□□ -2.18
SMARCB1-208ENST00000634926 A0A096LPF7 62 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms