RNA–Protein interactions for RNA: ENST00000628496.2

SOX2-OT-248, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 801 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-248ENST00000628496 C9JCJ5 164 aa9.45□□□□□ -0.9
SOX2-OT-248ENST00000628496 H3BNG1 76 aa9.45□□□□□ -0.9
SOX2-OT-248ENST00000628496 IGLV2-8P01709 118 aa9.45□□□□□ -0.9
SOX2-OT-248ENST00000628496 S100A4P26447 101 aaKnown RBP9.45□□□□□ -0.9
SOX2-OT-248ENST00000628496 ZNF876PQ49A33 203 aa9.45□□□□□ -0.9
SOX2-OT-248ENST00000628496 ZNF506Q5JVG8 444 aa9.45□□□□□ -0.9
SOX2-OT-248ENST00000628496 DNLZQ5SXM8 178 aa9.45□□□□□ -0.9
SOX2-OT-248ENST00000628496 PRR27Q6MZM9 219 aa9.45□□□□□ -0.9
SOX2-OT-248ENST00000628496 MED9Q9NWA0 146 aa9.45□□□□□ -0.9
SOX2-OT-248ENST00000628496 RBFOX3A6NFN3 312 aa9.44□□□□□ -0.9
SOX2-OT-248ENST00000628496 H3BVH4 76 aa9.44□□□□□ -0.9
SOX2-OT-248ENST00000628496 RPL19P84098 196 aaKnown RBP9.44□□□□□ -0.9
SOX2-OT-248ENST00000628496 TEX261Q6UWH6 196 aa9.44□□□□□ -0.9
SOX2-OT-248ENST00000628496 UBE2DNLQ8IWF7 75 aa9.44□□□□□ -0.9
SOX2-OT-248ENST00000628496 OR4C5Q8NGB2 326 aa9.44□□□□□ -0.9
SOX2-OT-248ENST00000628496 PTH2Q96A98 100 aa9.44□□□□□ -0.9
SOX2-OT-248ENST00000628496 IL36BQ9NZH7 164 aa9.44□□□□□ -0.9
SOX2-OT-248ENST00000628496 KMT2AQ03164 3969 aa9.44□□□□□ -0.9
SOX2-OT-248ENST00000628496 VPS13DQ5THJ4 4388 aa9.44□□□□□ -0.9
SOX2-OT-248ENST00000628496 TRGV4A0A0C4DH28 118 aa9.43□□□□□ -0.9
SOX2-OT-248ENST00000628496 PAX4O43316 350 aa9.43□□□□□ -0.9
SOX2-OT-248ENST00000628496 GNG4P50150 75 aa9.43□□□□□ -0.9
SOX2-OT-248ENST00000628496 CRYBA4P53673 196 aa9.43□□□□□ -0.9
SOX2-OT-248ENST00000628496 RNF212Q495C1 297 aa9.43□□□□□ -0.9
SOX2-OT-248ENST00000628496 PRO0255Q9UI72 69 aa9.43□□□□□ -0.9
SOX2-OT-248ENST00000628496 HHLA3Q9XRX5 114 aa9.43□□□□□ -0.9
SOX2-OT-248ENST00000628496 A0A096LPF7 62 aa9.42□□□□□ -0.9
SOX2-OT-248ENST00000628496 RS1O15537 224 aa9.42□□□□□ -0.9
SOX2-OT-248ENST00000628496 ARMS2P0C7Q2 107 aa9.42□□□□□ -0.9
SOX2-OT-248ENST00000628496 MGST1P10620 155 aaKnown RBP9.42□□□□□ -0.9
SOX2-OT-248ENST00000628496 SLAQ13239 276 aa9.42□□□□□ -0.9
SOX2-OT-248ENST00000628496 TOR2AQ5JU69 321 aa9.42□□□□□ -0.9
SOX2-OT-248ENST00000628496 CFAP126Q5VTH2 177 aa9.42□□□□□ -0.9
SOX2-OT-248ENST00000628496 PCNPQ8WW12 178 aaKnown RBP9.42□□□□□ -0.9
SOX2-OT-248ENST00000628496 SCRT2Q9NQ03 307 aa9.42□□□□□ -0.9
SOX2-OT-248ENST00000628496 LINC00588Q9Y4M8 146 aa9.42□□□□□ -0.9
SOX2-OT-248ENST00000628496 TMEM238LA0A1B0GVL6 79 aa9.41□□□□□ -0.9
SOX2-OT-248ENST00000628496 SMIM12Q96EX1 92 aa9.41□□□□□ -0.9
SOX2-OT-248ENST00000628496 FAM210AQ96ND0 272 aa9.41□□□□□ -0.9
SOX2-OT-248ENST00000628496 C19orf71A6NCJ1 209 aa9.4□□□□□ -0.9
SOX2-OT-248ENST00000628496 TMEM250H0YL14 139 aa9.4□□□□□ -0.9
SOX2-OT-248ENST00000628496 GATA1P15976 413 aaPredicted RBP9.4□□□□□ -0.9
SOX2-OT-248ENST00000628496 PIK3CD-AS1Q5SR53 167 aa9.4□□□□□ -0.9
SOX2-OT-248ENST00000628496 PARLQ9H300 379 aa9.4□□□□□ -0.9
SOX2-OT-248ENST00000628496 JPT2Q9H910 190 aa9.4□□□□□ -0.9
SOX2-OT-248ENST00000628496 ICOSQ9Y6W8 199 aa9.4□□□□□ -0.9
SOX2-OT-248ENST00000628496 IGHV3-73A0A0B4J1V6 119 aa9.39□□□□□ -0.91
SOX2-OT-248ENST00000628496 GHRHP01286 108 aa9.39□□□□□ -0.91
SOX2-OT-248ENST00000628496 CXCL1P09341 107 aa9.39□□□□□ -0.91
SOX2-OT-248ENST00000628496 CCL18P55774 89 aa9.39□□□□□ -0.91
SOX2-OT-248ENST00000628496 FAM3BP58499 235 aaPredicted RBP9.39□□□□□ -0.91
SOX2-OT-248ENST00000628496 ESRGQ1W209 222 aa9.39□□□□□ -0.91
SOX2-OT-248ENST00000628496 ZNRF2Q8NHG8 242 aa9.39□□□□□ -0.91
SOX2-OT-248ENST00000628496 EIF5A2Q9GZV4 153 aaKnown RBP9.39□□□□□ -0.91
SOX2-OT-248ENST00000628496 IGLV2-18A0A075B6J9 118 aa9.38□□□□□ -0.91
SOX2-OT-248ENST00000628496 LOC100131303A0A0U1RQF7 123 aa9.38□□□□□ -0.91
SOX2-OT-248ENST00000628496 K7EN84 100 aa9.38□□□□□ -0.91
SOX2-OT-248ENST00000628496 K7EQD1 137 aa9.38□□□□□ -0.91
SOX2-OT-248ENST00000628496 M0R381 172 aa9.38□□□□□ -0.91
SOX2-OT-248ENST00000628496 MED14OSP0DP75 135 aa9.38□□□□□ -0.91
SOX2-OT-248ENST00000628496 GYPEP15421 78 aa9.38□□□□□ -0.91
SOX2-OT-248ENST00000628496 UFSP1Q6NVU6 142 aa9.38□□□□□ -0.91
SOX2-OT-248ENST00000628496 SAMD10Q9BYL1 202 aa9.38□□□□□ -0.91
SOX2-OT-248ENST00000628496 PHLDA3Q9Y5J5 127 aa9.38□□□□□ -0.91
SOX2-OT-248ENST00000628496 A8MWV9 139 aa9.37□□□□□ -0.91
SOX2-OT-248ENST00000628496 M0R2N4 97 aa9.37□□□□□ -0.91
SOX2-OT-248ENST00000628496 SNAI2O43623 268 aa9.37□□□□□ -0.91
SOX2-OT-248ENST00000628496 CIDEAO60543 219 aa9.37□□□□□ -0.91
SOX2-OT-248ENST00000628496 CEBPGP53567 150 aa9.37□□□□□ -0.91
SOX2-OT-248ENST00000628496 MRPL23Q16540 153 aaKnown RBP9.37□□□□□ -0.91
SOX2-OT-248ENST00000628496 SLC25A29Q8N8R3 303 aa9.37□□□□□ -0.91
SOX2-OT-248ENST00000628496 SYT8Q8NBV8 401 aa9.37□□□□□ -0.91
SOX2-OT-248ENST00000628496 DAZAP1Q96EP5 407 aaKnown RBP9.37□□□□□ -0.91
SOX2-OT-248ENST00000628496 SSBP4Q9BWG4 385 aaPredicted RBP9.37□□□□□ -0.91
SOX2-OT-248ENST00000628496 NDUFS6O75380 124 aaKnown RBP9.36□□□□□ -0.91
SOX2-OT-248ENST00000628496 NXPH4O95158 308 aa9.36□□□□□ -0.91
SOX2-OT-248ENST00000628496 SRP19P09132 144 aaKnown RBP9.36□□□□□ -0.91
SOX2-OT-248ENST00000628496 OR5AL1P0C617 328 aa9.36□□□□□ -0.91
SOX2-OT-248ENST00000628496 GZMBP10144 247 aa9.36□□□□□ -0.91
SOX2-OT-248ENST00000628496 ZFP2Q6ZN57 461 aa9.36□□□□□ -0.91
SOX2-OT-248ENST00000628496 Q6ZR54 194 aa9.36□□□□□ -0.91
SOX2-OT-248ENST00000628496 Q6ZSN1 163 aa9.36□□□□□ -0.91
SOX2-OT-248ENST00000628496 ZFP82Q8N141 532 aa9.36□□□□□ -0.91
SOX2-OT-248ENST00000628496 OR2D3Q8NGH3 330 aa9.36□□□□□ -0.91
SOX2-OT-248ENST00000628496 OR10AG1Q8NH19 301 aa9.36□□□□□ -0.91
SOX2-OT-248ENST00000628496 OCC1Q8TAD7 63 aa9.36□□□□□ -0.91
SOX2-OT-248ENST00000628496 BIN3Q9NQY0 253 aa9.36□□□□□ -0.91
SOX2-OT-248ENST00000628496 MRPS16Q9Y3D3 137 aaKnown RBP9.36□□□□□ -0.91
SOX2-OT-248ENST00000628496 MUC4Q99102 2169 aa9.36□□□□□ -0.91
SOX2-OT-248ENST00000628496 DNAH6Q9C0G6 4158 aa9.35□□□□□ -0.91
SOX2-OT-248ENST00000628496 MUC21A0A0G2JKD1 596 aa9.35□□□□□ -0.91
SOX2-OT-248ENST00000628496 MUC21A0A140T8X8 626 aa9.35□□□□□ -0.91
SOX2-OT-248ENST00000628496 TRBV6-4A0A1B0GX49 114 aa9.35□□□□□ -0.91
SOX2-OT-248ENST00000628496 P01737 135 aa9.35□□□□□ -0.91
SOX2-OT-248ENST00000628496 SRIP30626 198 aa9.35□□□□□ -0.91
SOX2-OT-248ENST00000628496 NEGR1Q7Z3B1 354 aa9.35□□□□□ -0.91
SOX2-OT-248ENST00000628496 SFRP2Q96HF1 295 aa9.35□□□□□ -0.91
SOX2-OT-248ENST00000628496 UPK3BQ9BT76 320 aa9.35□□□□□ -0.91
SOX2-OT-248ENST00000628496 A0A087WWL8 130 aa9.34□□□□□ -0.91
SOX2-OT-248ENST00000628496 C9JQL5 133 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms