RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 K7EP13 123 aa7.06□□□□□ -1.28
PDPN-212ENST00000621990 PPP1R17O96001 155 aa7.06□□□□□ -1.28
PDPN-212ENST00000621990 NMUP48645 174 aa7.06□□□□□ -1.28
PDPN-212ENST00000621990 LINC00315P59091 139 aa7.06□□□□□ -1.28
PDPN-212ENST00000621990 C14orf178Q8N769 122 aaPredicted RBP7.06□□□□□ -1.28
PDPN-212ENST00000621990 TOMM6Q96B49 74 aa7.06□□□□□ -1.28
PDPN-212ENST00000621990 USP24Q9UPU5 2620 aa7.06□□□□□ -1.28
PDPN-212ENST00000621990 IGKV3-7A0A075B6H7 116 aa7.06□□□□□ -1.28
PDPN-212ENST00000621990 C7orf71A4D174 169 aa7.06□□□□□ -1.28
PDPN-212ENST00000621990 LGALS9O00182 355 aa7.06□□□□□ -1.28
PDPN-212ENST00000621990 RPL32P62910 135 aaKnown RBP7.06□□□□□ -1.28
PDPN-212ENST00000621990 C10orf99Q6UWK7 81 aa7.06□□□□□ -1.28
PDPN-212ENST00000621990 RNF152Q8N8N0 203 aa7.06□□□□□ -1.28
PDPN-212ENST00000621990 VPREB3Q9UKI3 123 aa7.06□□□□□ -1.28
PDPN-212ENST00000621990 MUC4Q99102 2169 aa7.05□□□□□ -1.28
PDPN-212ENST00000621990 IGHV4OR15-8A0A075B7B6 117 aa7.05□□□□□ -1.28
PDPN-212ENST00000621990 A0A087WW49 117 aa7.05□□□□□ -1.28
PDPN-212ENST00000621990 SRD5A1P18405 259 aa7.05□□□□□ -1.28
PDPN-212ENST00000621990 PLNP26678 52 aa7.05□□□□□ -1.28
PDPN-212ENST00000621990 VAMP3Q15836 100 aa7.05□□□□□ -1.28
PDPN-212ENST00000621990 Q6YL49 198 aa7.05□□□□□ -1.28
PDPN-212ENST00000621990 RPL39LQ96EH5 51 aaKnown RBP7.05□□□□□ -1.28
PDPN-212ENST00000621990 MRPL35Q9NZE8 188 aaKnown RBP7.05□□□□□ -1.28
PDPN-212ENST00000621990 CSPG4Q6UVK1 2322 aa7.05□□□□□ -1.28
PDPN-212ENST00000621990 A6NDN8 102 aa7.05□□□□□ -1.28
PDPN-212ENST00000621990 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.05□□□□□ -1.28
PDPN-212ENST00000621990 H3BRM9 83 aa7.04□□□□□ -1.28
PDPN-212ENST00000621990 K7EQG2 157 aa7.04□□□□□ -1.28
PDPN-212ENST00000621990 SPRY2O43597 315 aa7.04□□□□□ -1.28
PDPN-212ENST00000621990 TGFAP01135 160 aa7.04□□□□□ -1.28
PDPN-212ENST00000621990 ELANEP08246 267 aa7.04□□□□□ -1.28
PDPN-212ENST00000621990 LGALS1P09382 135 aaKnown RBP7.04□□□□□ -1.28
PDPN-212ENST00000621990 ZC2HC1BQ5TFG8 222 aa7.04□□□□□ -1.28
PDPN-212ENST00000621990 ZNF702PQ9H963 129 aa7.04□□□□□ -1.28
PDPN-212ENST00000621990 A0A0J9YX75 114 aa7.04□□□□□ -1.28
PDPN-212ENST00000621990 COX6B1P14854 86 aa7.04□□□□□ -1.28
PDPN-212ENST00000621990 TCTAP57738 103 aa7.04□□□□□ -1.28
PDPN-212ENST00000621990 FAM159AQ6UWV7 190 aa7.04□□□□□ -1.28
PDPN-212ENST00000621990 USP9YO00507 2555 aaPredicted RBP7.03□□□□□ -1.28
PDPN-212ENST00000621990 TRAV8-6A0A0B4J262 113 aa7.03□□□□□ -1.28
PDPN-212ENST00000621990 IGHV4-31P0DP07 118 aa7.03□□□□□ -1.28
PDPN-212ENST00000621990 NEXN-AS1Q8NBZ9 246 aa7.03□□□□□ -1.28
PDPN-212ENST00000621990 OR4C5Q8NGB2 326 aa7.03□□□□□ -1.28
PDPN-212ENST00000621990 UBE2E2Q96LR5 201 aa7.03□□□□□ -1.28
PDPN-212ENST00000621990 SELENOKQ9Y6D0 94 aa7.03□□□□□ -1.28
PDPN-212ENST00000621990 CR1P17927 2039 aa7.03□□□□□ -1.28
PDPN-212ENST00000621990 CENPEQ02224 2701 aa7.03□□□□□ -1.28
PDPN-212ENST00000621990 F8VRH5 84 aa7.03□□□□□ -1.28
PDPN-212ENST00000621990 H7C1H1 209 aa7.03□□□□□ -1.28
PDPN-212ENST00000621990 SNRPD3P62318 126 aaKnown RBP7.03□□□□□ -1.28
PDPN-212ENST00000621990 OXLD1Q5BKU9 147 aa7.03□□□□□ -1.28
PDPN-212ENST00000621990 AMMECR1LQ6DCA0 310 aa7.03□□□□□ -1.28
PDPN-212ENST00000621990 GTSCR1Q86UQ5 136 aa7.03□□□□□ -1.28
PDPN-212ENST00000621990 C9orf85Q96MD7 179 aa7.03□□□□□ -1.28
PDPN-212ENST00000621990 C9orf118A6NHY6 69 aa7.02□□□□□ -1.29
PDPN-212ENST00000621990 MGPP08493 103 aa7.02□□□□□ -1.29
PDPN-212ENST00000621990 ERASQ7Z444 233 aa7.02□□□□□ -1.29
PDPN-212ENST00000621990 TMEM160Q9NX00 188 aa7.02□□□□□ -1.29
PDPN-212ENST00000621990 ZNF462Q96JM2 2506 aa7.02□□□□□ -1.29
PDPN-212ENST00000621990 PRRC2AP48634 2157 aaKnown RBP7.02□□□□□ -1.29
PDPN-212ENST00000621990 TRBV25-1A0A075B6N4 114 aa7.02□□□□□ -1.29
PDPN-212ENST00000621990 IGHV3-16A0A0C4DH30 117 aa7.02□□□□□ -1.29
PDPN-212ENST00000621990 ZNF688P0C7X2 276 aa7.02□□□□□ -1.29
PDPN-212ENST00000621990 Q8N2B8 174 aa7.02□□□□□ -1.29
PDPN-212ENST00000621990 SCGB3A1Q96QR1 104 aa7.02□□□□□ -1.29
PDPN-212ENST00000621990 TRAV12-3A0A0B4J271 114 aa7.01□□□□□ -1.29
PDPN-212ENST00000621990 C2orf66Q6UXQ4 117 aa7.01□□□□□ -1.29
PDPN-212ENST00000621990 BBC3Q96PG8 261 aaPredicted RBP7.01□□□□□ -1.29
PDPN-212ENST00000621990 CHAC1Q9BUX1 264 aa7.01□□□□□ -1.29
PDPN-212ENST00000621990 CSTL1Q9H114 145 aa7.01□□□□□ -1.29
PDPN-212ENST00000621990 LRRK2Q5S007 2527 aa7.01□□□□□ -1.29
PDPN-212ENST00000621990 LINC01549A6NIU2 74 aa7.01□□□□□ -1.29
PDPN-212ENST00000621990 PRB1P04280 392 aa7.01□□□□□ -1.29
PDPN-212ENST00000621990 HOXD3P31249 432 aaPredicted RBP7.01□□□□□ -1.29
PDPN-212ENST00000621990 POLR2KP53803 58 aaKnown RBP7.01□□□□□ -1.29
PDPN-212ENST00000621990 SYNJ2BPP57105 145 aa7.01□□□□□ -1.29
PDPN-212ENST00000621990 MAPK1IP1LQ8NDC0 245 aa7.01□□□□□ -1.29
PDPN-212ENST00000621990 TM2D2Q9BX73 214 aa7.01□□□□□ -1.29
PDPN-212ENST00000621990 TTTY13Q9BZ97 58 aa7.01□□□□□ -1.29
PDPN-212ENST00000621990 BEX4Q9NWD9 120 aaPredicted RBP7.01□□□□□ -1.29
PDPN-212ENST00000621990 CBY1Q9Y3M2 126 aa7.01□□□□□ -1.29
PDPN-212ENST00000621990 AKAP9Q99996 3911 aa7.01□□□□□ -1.29
PDPN-212ENST00000621990 TRBV6-5A0A0K0K1A5 114 aa7□□□□□ -1.29
PDPN-212ENST00000621990 CD7P09564 240 aa7□□□□□ -1.29
PDPN-212ENST00000621990 SUMO4Q6EEV6 95 aa7□□□□□ -1.29
PDPN-212ENST00000621990 UFSP1Q6NVU6 142 aa7□□□□□ -1.29
PDPN-212ENST00000621990 LRRC75A-AS1Q8N1F1 130 aa7□□□□□ -1.29
PDPN-212ENST00000621990 BAALCQ8WXS3 180 aa7□□□□□ -1.29
PDPN-212ENST00000621990 CHTOPQ9Y3Y2 248 aaKnown RBP7□□□□□ -1.29
PDPN-212ENST00000621990 POLQO75417 2590 aa7□□□□□ -1.29
PDPN-212ENST00000621990 CDKN1BP46527 198 aa7□□□□□ -1.29
PDPN-212ENST00000621990 FOXI2Q6ZQN5 318 aa7□□□□□ -1.29
PDPN-212ENST00000621990 ZNF843Q8N446 348 aa7□□□□□ -1.29
PDPN-212ENST00000621990 JMJD8Q96S16 334 aa7□□□□□ -1.29
PDPN-212ENST00000621990 ZFYVE26Q68DK2 2539 aa7□□□□□ -1.29
PDPN-212ENST00000621990 LINC01619G3V211 115 aa6.99□□□□□ -1.29
PDPN-212ENST00000621990 HOXA3O43365 443 aaPredicted RBP6.99□□□□□ -1.29
PDPN-212ENST00000621990 DUSP14O95147 198 aaKnown RBP6.99□□□□□ -1.29
PDPN-212ENST00000621990 AMTNQ6UX39 209 aa6.99□□□□□ -1.29
PDPN-212ENST00000621990 MAPKAPK5-AS1Q8N8E1 139 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms