RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 PYGO2Q9BRQ0 406 aa7.17□□□□□ -1.26
GGA3-223ENST00000621870 HELZ2Q9BYK8 2649 aaKnown RBP7.17□□□□□ -1.26
GGA3-223ENST00000621870 RBMY1BA6NDE4 496 aaKnown RBP7.17□□□□□ -1.26
GGA3-223ENST00000621870 RBMY1EA6NEQ0 496 aaKnown RBP7.17□□□□□ -1.26
GGA3-223ENST00000621870 TYMSP04818 313 aa7.17□□□□□ -1.26
GGA3-223ENST00000621870 RBMY1DP0C7P1 496 aaKnown RBP7.17□□□□□ -1.26
GGA3-223ENST00000621870 RBMY1A1P0DJD3 496 aaKnown RBP7.17□□□□□ -1.26
GGA3-223ENST00000621870 RBMY1CP0DJD4 496 aa7.17□□□□□ -1.26
GGA3-223ENST00000621870 FAM104BQ5XKR9 115 aa7.17□□□□□ -1.26
GGA3-223ENST00000621870 PRIMA1Q86XR5 153 aa7.17□□□□□ -1.26
GGA3-223ENST00000621870 U3KQE9 123 aa7.17□□□□□ -1.26
GGA3-223ENST00000621870 ZNF664Q8N3J9 261 aa7.17□□□□□ -1.26
GGA3-223ENST00000621870 TRAV9-2A0A087WT02 112 aa7.17□□□□□ -1.26
GGA3-223ENST00000621870 C2orf66Q6UXQ4 117 aa7.17□□□□□ -1.26
GGA3-223ENST00000621870 UNQ9165/PRO28630Q6UXU0 137 aa7.17□□□□□ -1.26
GGA3-223ENST00000621870 PATE2Q6UY27 113 aa7.17□□□□□ -1.26
GGA3-223ENST00000621870 LY6G5BQ8NDX9 201 aa7.17□□□□□ -1.26
GGA3-223ENST00000621870 TP53TG1Q9Y2A0 90 aa7.17□□□□□ -1.26
GGA3-223ENST00000621870 SLC25A20O43772 301 aa7.16□□□□□ -1.26
GGA3-223ENST00000621870 ANGP03950 147 aaKnown RBP7.16□□□□□ -1.26
GGA3-223ENST00000621870 MYCNOSP40205 109 aa7.16□□□□□ -1.26
GGA3-223ENST00000621870 DEFB135Q30KP9 77 aa7.16□□□□□ -1.26
GGA3-223ENST00000621870 FANCD2OSQ96PS1 177 aa7.16□□□□□ -1.26
GGA3-223ENST00000621870 DEFB4AO15263 64 aa7.16□□□□□ -1.26
GGA3-223ENST00000621870 KRTAP10-9P60411 292 aa7.16□□□□□ -1.26
GGA3-223ENST00000621870 RASL10AQ92737 203 aa7.16□□□□□ -1.26
GGA3-223ENST00000621870 MRPL53Q96EL3 112 aaKnown RBP7.16□□□□□ -1.26
GGA3-223ENST00000621870 IGKV1OR2-108A0A075B7D4 117 aa7.16□□□□□ -1.26
GGA3-223ENST00000621870 FAM231BA6NCW3 169 aa7.16□□□□□ -1.26
GGA3-223ENST00000621870 PRSS46E5RG02 174 aa7.16□□□□□ -1.26
GGA3-223ENST00000621870 PLP1P60201 277 aa7.16□□□□□ -1.26
GGA3-223ENST00000621870 C16orf54Q6UWD8 224 aa7.16□□□□□ -1.26
GGA3-223ENST00000621870 CLPSL2Q6UWE3 100 aa7.16□□□□□ -1.26
GGA3-223ENST00000621870 LYPD6BQ8NI32 183 aa7.16□□□□□ -1.26
GGA3-223ENST00000621870 TMEM243Q9BU79 118 aa7.16□□□□□ -1.26
GGA3-223ENST00000621870 CST9LQ9H4G1 147 aa7.16□□□□□ -1.26
GGA3-223ENST00000621870 CRYGCP07315 174 aa7.15□□□□□ -1.26
GGA3-223ENST00000621870 C11orf71Q6IPW1 123 aa7.15□□□□□ -1.26
GGA3-223ENST00000621870 DLX4Q92988 240 aaPredicted RBP7.15□□□□□ -1.26
GGA3-223ENST00000621870 GFRA4Q9GZZ7 299 aa7.15□□□□□ -1.26
GGA3-223ENST00000621870 PLA2G2EQ9NZK7 142 aa7.15□□□□□ -1.26
GGA3-223ENST00000621870 REV3LO60673 3130 aa7.15□□□□□ -1.26
GGA3-223ENST00000621870 A8MWP6 167 aa7.15□□□□□ -1.26
GGA3-223ENST00000621870 VWC2LB2RUY7 222 aa7.15□□□□□ -1.26
GGA3-223ENST00000621870 ZNF561-AS1K7EIQ3 104 aa7.15□□□□□ -1.26
GGA3-223ENST00000621870 VWC2Q2TAL6 325 aa7.15□□□□□ -1.26
GGA3-223ENST00000621870 CT83Q5H943 113 aa7.15□□□□□ -1.26
GGA3-223ENST00000621870 SMAD5-AS1Q9Y6J3 95 aa7.15□□□□□ -1.26
GGA3-223ENST00000621870 MGAQ8IWI9 3026 aa7.15□□□□□ -1.27
GGA3-223ENST00000621870 K7ERU9 68 aa7.15□□□□□ -1.27
GGA3-223ENST00000621870 EGR2P11161 476 aaPredicted RBP7.15□□□□□ -1.27
GGA3-223ENST00000621870 GPHB5Q86YW7 130 aa7.15□□□□□ -1.27
GGA3-223ENST00000621870 Q9HAA7 133 aa7.15□□□□□ -1.27
GGA3-223ENST00000621870 LY6G6DO95868 133 aa7.14□□□□□ -1.27
GGA3-223ENST00000621870 C3orf79P0CE67 100 aa7.14□□□□□ -1.27
GGA3-223ENST00000621870 MRPL51Q4U2R6 128 aaKnown RBP7.14□□□□□ -1.27
GGA3-223ENST00000621870 KIAA1549LQ6ZVL6 1849 aa7.14□□□□□ -1.27
GGA3-223ENST00000621870 SPTBN5Q9NRC6 3674 aaKnown RBP7.14□□□□□ -1.27
GGA3-223ENST00000621870 CD5LO43866 347 aa7.14□□□□□ -1.27
GGA3-223ENST00000621870 IGLV2-14P01704 120 aa7.14□□□□□ -1.27
GGA3-223ENST00000621870 C11orf52Q96A22 123 aa7.14□□□□□ -1.27
GGA3-223ENST00000621870 M0R2P5 195 aa7.14□□□□□ -1.27
GGA3-223ENST00000621870 SCGB1A1P11684 91 aa7.14□□□□□ -1.27
GGA3-223ENST00000621870 HIST2H2BDQ6DRA6 164 aa7.14□□□□□ -1.27
GGA3-223ENST00000621870 hDV102S1A0JD36 115 aa7.13□□□□□ -1.27
GGA3-223ENST00000621870 EREGO14944 169 aa7.13□□□□□ -1.27
GGA3-223ENST00000621870 HLA-DRB4P13762 266 aa7.13□□□□□ -1.27
GGA3-223ENST00000621870 HLA-DRB4X5D2U9 266 aa7.13□□□□□ -1.27
GGA3-223ENST00000621870 PRAC2D3DTV9 90 aa7.13□□□□□ -1.27
GGA3-223ENST00000621870 I3L3M4 83 aa7.13□□□□□ -1.27
GGA3-223ENST00000621870 SPART-AS1P0CW21 52 aa7.13□□□□□ -1.27
GGA3-223ENST00000621870 SLAQ13239 276 aa7.13□□□□□ -1.27
GGA3-223ENST00000621870 ADAMTSL5Q6ZMM2 481 aa7.13□□□□□ -1.27
GGA3-223ENST00000621870 FAM231DQ6ZW35 169 aa7.13□□□□□ -1.27
GGA3-223ENST00000621870 PLEKHB2Q96CS7 222 aa7.13□□□□□ -1.27
GGA3-223ENST00000621870 BBC3Q96PG8 261 aaPredicted RBP7.13□□□□□ -1.27
GGA3-223ENST00000621870 MEGF9Q9H1U4 602 aa7.13□□□□□ -1.27
GGA3-223ENST00000621870 LAMTOR2Q9Y2Q5 125 aa7.13□□□□□ -1.27
GGA3-223ENST00000621870 LENEPQ9Y5L5 61 aa7.13□□□□□ -1.27
GGA3-223ENST00000621870 V9GYV3 84 aa7.13□□□□□ -1.27
GGA3-223ENST00000621870 ODF3BA8MYP8 253 aa7.13□□□□□ -1.27
GGA3-223ENST00000621870 TIMM21Q9BVV7 248 aa7.13□□□□□ -1.27
GGA3-223ENST00000621870 CFAP46Q8IYW2 2715 aa7.13□□□□□ -1.27
GGA3-223ENST00000621870 DSPP15924 2871 aaKnown RBP7.13□□□□□ -1.27
GGA3-223ENST00000621870 K7EMT4 169 aa7.12□□□□□ -1.27
GGA3-223ENST00000621870 KLF5Q13887 457 aaPredicted RBP7.12□□□□□ -1.27
GGA3-223ENST00000621870 RHOHQ15669 191 aa7.12□□□□□ -1.27
GGA3-223ENST00000621870 LINC01559Q495D7 138 aa7.12□□□□□ -1.27
GGA3-223ENST00000621870 Q6ZPA2 131 aa7.12□□□□□ -1.27
GGA3-223ENST00000621870 C18orf32Q8TCD1 76 aa7.12□□□□□ -1.27
GGA3-223ENST00000621870 CFHR4Q92496 578 aa7.12□□□□□ -1.27
GGA3-223ENST00000621870 H3BMM0 161 aa7.12□□□□□ -1.27
GGA3-223ENST00000621870 PFN2P35080 140 aa7.12□□□□□ -1.27
GGA3-223ENST00000621870 RNASE13Q5GAN3 156 aaKnown RBP7.12□□□□□ -1.27
GGA3-223ENST00000621870 Q6YL49 198 aa7.12□□□□□ -1.27
GGA3-223ENST00000621870 ZNF493Q6ZR52 646 aa7.12□□□□□ -1.27
GGA3-223ENST00000621870 Q6ZSV7 163 aa7.12□□□□□ -1.27
GGA3-223ENST00000621870 UBE2WQ96B02 151 aa7.12□□□□□ -1.27
GGA3-223ENST00000621870 CHAC1Q9BUX1 264 aa7.12□□□□□ -1.27
GGA3-223ENST00000621870 TMEM238C9JI98 176 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 142.7 ms