RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 CRIP2P52943 208 aaPredicted RBP3.94□□□□□ -1.78
VPS13D-214ENST00000620676 DENND4CQ5VZ89 1909 aa3.94□□□□□ -1.78
VPS13D-214ENST00000620676 Q6ZPA2 131 aa3.94□□□□□ -1.78
VPS13D-214ENST00000620676 C11orf86A6NJI1 115 aa3.94□□□□□ -1.78
VPS13D-214ENST00000620676 GAFA1Q96PS6 74 aa3.94□□□□□ -1.78
VPS13D-214ENST00000620676 PRR20EP86478 221 aa3.94□□□□□ -1.78
VPS13D-214ENST00000620676 PRR20CP86479 221 aa3.94□□□□□ -1.78
VPS13D-214ENST00000620676 PRR20DP86480 221 aa3.94□□□□□ -1.78
VPS13D-214ENST00000620676 PRR20BP86481 221 aa3.94□□□□□ -1.78
VPS13D-214ENST00000620676 PRR20AP86496 221 aa3.94□□□□□ -1.78
VPS13D-214ENST00000620676 Q9H8V8 135 aa3.94□□□□□ -1.78
VPS13D-214ENST00000620676 PTPN13Q12923 2485 aa3.94□□□□□ -1.78
VPS13D-214ENST00000620676 C6orf226Q5I0X4 101 aa3.94□□□□□ -1.78
VPS13D-214ENST00000620676 Q6ZT83 130 aa3.94□□□□□ -1.78
VPS13D-214ENST00000620676 C11orf44Q8N8P7 122 aa3.94□□□□□ -1.78
VPS13D-214ENST00000620676 A0A0J9YXV3 536 aa3.94□□□□□ -1.78
VPS13D-214ENST00000620676 ENHOQ6UWT2 76 aa3.94□□□□□ -1.78
VPS13D-214ENST00000620676 TMEM86BQ8N661 226 aa3.94□□□□□ -1.78
VPS13D-214ENST00000620676 UBE2E2Q96LR5 201 aa3.94□□□□□ -1.78
VPS13D-214ENST00000620676 WI2-2373I1.2A0A1W2PRP0 233 aa3.94□□□□□ -1.78
VPS13D-214ENST00000620676 I3L3M4 83 aa3.94□□□□□ -1.78
VPS13D-214ENST00000620676 NBL1P41271 181 aa3.94□□□□□ -1.78
VPS13D-214ENST00000620676 SPANXDQ9BXN6 97 aa3.94□□□□□ -1.78
VPS13D-214ENST00000620676 USF3Q68DE3 2245 aa3.93□□□□□ -1.78
VPS13D-214ENST00000620676 YLPM1P49750 1951 aaKnown RBP3.93□□□□□ -1.78
VPS13D-214ENST00000620676 MBD3L2Q8NHZ7 208 aaPredicted RBP3.93□□□□□ -1.78
VPS13D-214ENST00000620676 RHODO00212 210 aa3.93□□□□□ -1.78
VPS13D-214ENST00000620676 B3GALT5-AS1P59052 145 aa3.93□□□□□ -1.78
VPS13D-214ENST00000620676 CRYGCP07315 174 aa3.93□□□□□ -1.78
VPS13D-214ENST00000620676 SCXQ7RTU7 201 aa3.93□□□□□ -1.78
VPS13D-214ENST00000620676 Q8TCH9 128 aa3.93□□□□□ -1.78
VPS13D-214ENST00000620676 AGPAT4-IT1Q9H0P7 198 aa3.93□□□□□ -1.78
VPS13D-214ENST00000620676 OTOGLQ3ZCN5 2332 aa3.93□□□□□ -1.78
VPS13D-214ENST00000620676 KIF26AQ9ULI4 1882 aaPredicted RBP3.93□□□□□ -1.78
VPS13D-214ENST00000620676 MRPL36Q9P0J6 103 aaKnown RBP3.93□□□□□ -1.78
VPS13D-214ENST00000620676 MED13Q9UHV7 2174 aa3.93□□□□□ -1.78
VPS13D-214ENST00000620676 ATP5G1P05496 136 aa3.93□□□□□ -1.78
VPS13D-214ENST00000620676 TRIP6Q15654 476 aaKnown RBP3.93□□□□□ -1.78
VPS13D-214ENST00000620676 SPRY4Q9C004 299 aa3.93□□□□□ -1.78
VPS13D-214ENST00000620676 IGLV3-32A0A0A0MS00 114 aa3.93□□□□□ -1.78
VPS13D-214ENST00000620676 ZNF22P17026 224 aaPredicted RBP3.93□□□□□ -1.78
VPS13D-214ENST00000620676 DPM3Q9P2X0 92 aa3.93□□□□□ -1.78
VPS13D-214ENST00000620676 LINC01559Q495D7 138 aa3.93□□□□□ -1.78
VPS13D-214ENST00000620676 ORMDL1Q9P0S3 153 aa3.93□□□□□ -1.78
VPS13D-214ENST00000620676 NLRC5Q86WI3 1866 aa3.93□□□□□ -1.78
VPS13D-214ENST00000620676 FAM236DA0A1B0GTK5 79 aa3.93□□□□□ -1.78
VPS13D-214ENST00000620676 FAM236CP0DP71 79 aa3.93□□□□□ -1.78
VPS13D-214ENST00000620676 CDIP1Q9H305 208 aa3.93□□□□□ -1.78
VPS13D-214ENST00000620676 MSRB2Q9Y3D2 182 aa3.93□□□□□ -1.78
VPS13D-214ENST00000620676 TNRC6BQ9UPQ9 1833 aaKnown RBP3.93□□□□□ -1.78
VPS13D-214ENST00000620676 TRIAP1O43715 76 aa3.93□□□□□ -1.78
VPS13D-214ENST00000620676 C17orf58Q2M2W7 97 aa3.93□□□□□ -1.78
VPS13D-214ENST00000620676 A8MZ25 164 aa3.93□□□□□ -1.78
VPS13D-214ENST00000620676 CCL21O00585 134 aa3.93□□□□□ -1.78
VPS13D-214ENST00000620676 UBL5Q9BZL1 73 aa3.93□□□□□ -1.78
VPS13D-214ENST00000620676 PAX8Q06710 450 aa3.93□□□□□ -1.78
VPS13D-214ENST00000620676 COL11A2P13942 1736 aaPredicted RBP3.92□□□□□ -1.78
VPS13D-214ENST00000620676 UQCRQO14949 82 aa3.92□□□□□ -1.78
VPS13D-214ENST00000620676 TMEM61Q8N0U2 210 aa3.92□□□□□ -1.78
VPS13D-214ENST00000620676 PRR4Q16378 134 aa3.92□□□□□ -1.78
VPS13D-214ENST00000620676 EDN2P20800 178 aa3.92□□□□□ -1.78
VPS13D-214ENST00000620676 PRR7Q8TB68 274 aa3.92□□□□□ -1.78
VPS13D-214ENST00000620676 VWCEQ96DN2 955 aa3.92□□□□□ -1.78
VPS13D-214ENST00000620676 SPINK13Q1W4C9 94 aa3.92□□□□□ -1.78
VPS13D-214ENST00000620676 SLC25A29Q8N8R3 303 aa3.92□□□□□ -1.78
VPS13D-214ENST00000620676 E7EUB6 86 aa3.92□□□□□ -1.78
VPS13D-214ENST00000620676 G3V318 75 aa3.92□□□□□ -1.78
VPS13D-214ENST00000620676 IGF1P05019 195 aa3.92□□□□□ -1.78
VPS13D-214ENST00000620676 COL4A6Q14031 1691 aa3.92□□□□□ -1.78
VPS13D-214ENST00000620676 NANOS2P60321 138 aaKnown RBP3.92□□□□□ -1.78
VPS13D-214ENST00000620676 IGHG3P01860 377 aa3.92□□□□□ -1.78
VPS13D-214ENST00000620676 SEC61GP60059 68 aa3.92□□□□□ -1.78
VPS13D-214ENST00000620676 TMEM167AQ8TBQ9 72 aa3.92□□□□□ -1.78
VPS13D-214ENST00000620676 UPK3BQ9BT76 320 aa3.92□□□□□ -1.78
VPS13D-214ENST00000620676 IGKV1OR2-108A0A075B7D4 117 aa3.92□□□□□ -1.78
VPS13D-214ENST00000620676 Q6ZSV7 163 aa3.92□□□□□ -1.78
VPS13D-214ENST00000620676 PIFOQ8TCI5 191 aa3.91□□□□□ -1.78
VPS13D-214ENST00000620676 A0A1B0GXF2 115 aa3.91□□□□□ -1.78
VPS13D-214ENST00000620676 KIR2DL5BQ8NHK3 375 aa3.91□□□□□ -1.78
VPS13D-214ENST00000620676 BRWD1-AS2P59051 145 aa3.91□□□□□ -1.78
VPS13D-214ENST00000620676 CFAP126Q5VTH2 177 aa3.91□□□□□ -1.78
VPS13D-214ENST00000620676 HELZP42694 1942 aaKnown RBP3.91□□□□□ -1.78
VPS13D-214ENST00000620676 FN1P02751 2386 aaKnown RBP3.91□□□□□ -1.78
VPS13D-214ENST00000620676 IGHV1-8P0DP01 117 aa3.91□□□□□ -1.78
VPS13D-214ENST00000620676 FOXL2NBQ6ZUU3 175 aa3.91□□□□□ -1.78
VPS13D-214ENST00000620676 OVOL1O14753 267 aa3.91□□□□□ -1.78
VPS13D-214ENST00000620676 C8orf31Q8N9H6 132 aa3.91□□□□□ -1.78
VPS13D-214ENST00000620676 TOMM6Q96B49 74 aa3.91□□□□□ -1.78
VPS13D-214ENST00000620676 Q6ZS46 218 aa3.91□□□□□ -1.78
VPS13D-214ENST00000620676 POM121L12Q8N7R1 296 aa3.91□□□□□ -1.78
VPS13D-214ENST00000620676 LCTP09848 1927 aa3.91□□□□□ -1.78
VPS13D-214ENST00000620676 P0DMU3 169 aa3.91□□□□□ -1.78
VPS13D-214ENST00000620676 FAM231AP0DMU4 169 aa3.91□□□□□ -1.78
VPS13D-214ENST00000620676 FAM231CP0DMU5 169 aa3.91□□□□□ -1.78
VPS13D-214ENST00000620676 MYCNOSP40205 109 aa3.91□□□□□ -1.78
VPS13D-214ENST00000620676 SCN10AQ9Y5Y9 1956 aa3.91□□□□□ -1.78
VPS13D-214ENST00000620676 WDR87Q6ZQQ6 2873 aa3.91□□□□□ -1.78
VPS13D-214ENST00000620676 GP9P14770 177 aa3.91□□□□□ -1.78
VPS13D-214ENST00000620676 OVOL2Q9BRP0 275 aa3.91□□□□□ -1.78
VPS13D-214ENST00000620676 PCDH15Q96QU1 1955 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms