RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 TEX29Q8N6K0 151 aa7.05□□□□□ -1.28
RBFOX1-223ENST00000620507 SMIM2Q9BVW6 85 aa7.05□□□□□ -1.28
RBFOX1-223ENST00000620507 NHP2Q9NX24 153 aaKnown RBP7.05□□□□□ -1.28
RBFOX1-223ENST00000620507 PEMTQ9UBM1 199 aa7.05□□□□□ -1.28
RBFOX1-223ENST00000620507 TLN2Q9Y4G6 2542 aa7.05□□□□□ -1.28
RBFOX1-223ENST00000620507 IGF1P05019 195 aa7.05□□□□□ -1.28
RBFOX1-223ENST00000620507 DUX3Q96PT4 197 aa7.05□□□□□ -1.28
RBFOX1-223ENST00000620507 SCRT2Q9NQ03 307 aa7.05□□□□□ -1.28
RBFOX1-223ENST00000620507 ZFYVE26Q68DK2 2539 aa7.05□□□□□ -1.28
RBFOX1-223ENST00000620507 A6NDX4 124 aa7.05□□□□□ -1.28
RBFOX1-223ENST00000620507 H7C1H1 209 aa7.05□□□□□ -1.28
RBFOX1-223ENST00000620507 SPATA12Q7Z6I5 190 aa7.05□□□□□ -1.28
RBFOX1-223ENST00000620507 B5MCH6 92 aa7.04□□□□□ -1.28
RBFOX1-223ENST00000620507 J3QLI3 93 aa7.04□□□□□ -1.28
RBFOX1-223ENST00000620507 SHISA2Q6UWI4 295 aa7.04□□□□□ -1.28
RBFOX1-223ENST00000620507 MRPL35Q9NZE8 188 aaKnown RBP7.04□□□□□ -1.28
RBFOX1-223ENST00000620507 SCGB1C2P0DMR2 95 aa7.04□□□□□ -1.28
RBFOX1-223ENST00000620507 SPINK13Q1W4C9 94 aa7.04□□□□□ -1.28
RBFOX1-223ENST00000620507 SPCS1Q9Y6A9 102 aa7.04□□□□□ -1.28
RBFOX1-223ENST00000620507 LRRK2Q5S007 2527 aa7.04□□□□□ -1.28
RBFOX1-223ENST00000620507 VCYO14598 125 aa7.04□□□□□ -1.28
RBFOX1-223ENST00000620507 EMP1P54849 157 aa7.04□□□□□ -1.28
RBFOX1-223ENST00000620507 TTC32Q5I0X7 151 aa7.04□□□□□ -1.28
RBFOX1-223ENST00000620507 C2orf66Q6UXQ4 117 aa7.04□□□□□ -1.28
RBFOX1-223ENST00000620507 TRAV12-2A0A075B6T6 113 aa7.04□□□□□ -1.28
RBFOX1-223ENST00000620507 PRB1P04280 392 aa7.04□□□□□ -1.28
RBFOX1-223ENST00000620507 KIR3DS1Q14943 382 aa7.04□□□□□ -1.28
RBFOX1-223ENST00000620507 DMXL1Q9Y485 3027 aa7.03□□□□□ -1.28
RBFOX1-223ENST00000620507 ADGRG4Q8IZF6 3080 aa7.03□□□□□ -1.28
RBFOX1-223ENST00000620507 DMDP11532 3685 aa7.03□□□□□ -1.28
RBFOX1-223ENST00000620507 TRGV11A0A075B6L2 103 aa7.03□□□□□ -1.28
RBFOX1-223ENST00000620507 CLPSL1A2RUU4 121 aa7.03□□□□□ -1.28
RBFOX1-223ENST00000620507 PAPPA-AS1Q5QFB9 102 aa7.03□□□□□ -1.28
RBFOX1-223ENST00000620507 JMJD8Q96S16 334 aa7.03□□□□□ -1.28
RBFOX1-223ENST00000620507 TP73-AS1Q9UF72 201 aa7.03□□□□□ -1.28
RBFOX1-223ENST00000620507 TNFRSF18Q9Y5U5 241 aa7.03□□□□□ -1.28
RBFOX1-223ENST00000620507 NOTCH2Q04721 2471 aa7.03□□□□□ -1.28
RBFOX1-223ENST00000620507 Q1RN00 199 aa7.03□□□□□ -1.28
RBFOX1-223ENST00000620507 CD300EQ496F6 205 aaPredicted RBP7.03□□□□□ -1.28
RBFOX1-223ENST00000620507 PCP2Q8IVA1 136 aa7.03□□□□□ -1.28
RBFOX1-223ENST00000620507 C11orf44Q8N8P7 122 aa7.03□□□□□ -1.28
RBFOX1-223ENST00000620507 TRAV8-2A0A0B4J237 113 aa7.03□□□□□ -1.28
RBFOX1-223ENST00000620507 LINC01549A6NIU2 74 aa7.03□□□□□ -1.28
RBFOX1-223ENST00000620507 LGALS3P17931 250 aaKnown RBP7.03□□□□□ -1.28
RBFOX1-223ENST00000620507 LINC01587Q99440 93 aa7.03□□□□□ -1.28
RBFOX1-223ENST00000620507 C20orf78Q9BR46 151 aa7.02□□□□□ -1.29
RBFOX1-223ENST00000620507 CHAC1Q9BUX1 264 aa7.02□□□□□ -1.29
RBFOX1-223ENST00000620507 VPREB3Q9UKI3 123 aa7.02□□□□□ -1.29
RBFOX1-223ENST00000620507 SONP18583 2426 aaKnown RBP7.02□□□□□ -1.29
RBFOX1-223ENST00000620507 WNK1Q9H4A3 2382 aa7.02□□□□□ -1.29
RBFOX1-223ENST00000620507 A0A1W2PRX2 142 aa7.02□□□□□ -1.29
RBFOX1-223ENST00000620507 ZNF876PQ49A33 203 aa7.02□□□□□ -1.29
RBFOX1-223ENST00000620507 DEFB125Q8N687 156 aa7.02□□□□□ -1.29
RBFOX1-223ENST00000620507 KLK9Q9UKQ9 250 aa7.02□□□□□ -1.29
RBFOX1-223ENST00000620507 TSSC4Q9Y5U2 329 aaPredicted RBP7.02□□□□□ -1.29
RBFOX1-223ENST00000620507 LOC107984156A0A0G2JMH3 177 aa7.02□□□□□ -1.29
RBFOX1-223ENST00000620507 ZNF815PA8K554 130 aa7.02□□□□□ -1.29
RBFOX1-223ENST00000620507 ELANEP08246 267 aa7.02□□□□□ -1.29
RBFOX1-223ENST00000620507 DEFB131AP59861 70 aa7.02□□□□□ -1.29
RBFOX1-223ENST00000620507 TCTEX1D4Q5JR98 221 aa7.02□□□□□ -1.29
RBFOX1-223ENST00000620507 LYRM7Q5U5X0 104 aa7.02□□□□□ -1.29
RBFOX1-223ENST00000620507 NEGR1Q7Z3B1 354 aa7.02□□□□□ -1.29
RBFOX1-223ENST00000620507 ARL17AQ8IVW1 177 aa7.02□□□□□ -1.29
RBFOX1-223ENST00000620507 U3KQK5 164 aa7.02□□□□□ -1.29
RBFOX1-223ENST00000620507 A4D1N5 150 aa7.01□□□□□ -1.29
RBFOX1-223ENST00000620507 HOXA3O43365 443 aaPredicted RBP7.01□□□□□ -1.29
RBFOX1-223ENST00000620507 K7EMT4 169 aa7.01□□□□□ -1.29
RBFOX1-223ENST00000620507 C20orf173Q96LM9 149 aa7.01□□□□□ -1.29
RBFOX1-223ENST00000620507 DMXL2Q8TDJ6 3036 aa7.01□□□□□ -1.29
RBFOX1-223ENST00000620507 POLQO75417 2590 aa7.01□□□□□ -1.29
RBFOX1-223ENST00000620507 F8VRH5 84 aa7.01□□□□□ -1.29
RBFOX1-223ENST00000620507 SAMD5Q5TGI4 173 aa7.01□□□□□ -1.29
RBFOX1-223ENST00000620507 RPL39LQ96EH5 51 aaKnown RBP7.01□□□□□ -1.29
RBFOX1-223ENST00000620507 SDHAF1A6NFY7 115 aa7□□□□□ -1.29
RBFOX1-223ENST00000620507 GPHB5Q86YW7 130 aa7□□□□□ -1.29
RBFOX1-223ENST00000620507 GATD1Q8NB37 220 aa7□□□□□ -1.29
RBFOX1-223ENST00000620507 RNF185Q96GF1 192 aa7□□□□□ -1.29
RBFOX1-223ENST00000620507 C11orf21Q9P2W6 132 aa7□□□□□ -1.29
RBFOX1-223ENST00000620507 TP53TG1Q9Y2A0 90 aa7□□□□□ -1.29
RBFOX1-223ENST00000620507 IGHV1OR15-1A0A075B7D0 117 aa7□□□□□ -1.29
RBFOX1-223ENST00000620507 A0A087WX48 190 aa7□□□□□ -1.29
RBFOX1-223ENST00000620507 IGHV3-73A0A0B4J1V6 119 aa7□□□□□ -1.29
RBFOX1-223ENST00000620507 SIVA1O15304 175 aa7□□□□□ -1.29
RBFOX1-223ENST00000620507 HOXD3P31249 432 aaPredicted RBP7□□□□□ -1.29
RBFOX1-223ENST00000620507 KLHL30-AS1Q8NEE0 82 aa7□□□□□ -1.29
RBFOX1-223ENST00000620507 ZNF479Q96JC4 524 aa7□□□□□ -1.29
RBFOX1-223ENST00000620507 Q96MF0 132 aa7□□□□□ -1.29
RBFOX1-223ENST00000620507 PSMB2P49721 201 aa7□□□□□ -1.29
RBFOX1-223ENST00000620507 DOPEY1Q5JWR5 2465 aa7□□□□□ -1.29
RBFOX1-223ENST00000620507 LGALS1P09382 135 aaKnown RBP6.99□□□□□ -1.29
RBFOX1-223ENST00000620507 COX8CQ7Z4L0 72 aa6.99□□□□□ -1.29
RBFOX1-223ENST00000620507 MRPL16Q9NX20 251 aaKnown RBP6.99□□□□□ -1.29
RBFOX1-223ENST00000620507 H3BRM9 83 aa6.99□□□□□ -1.29
RBFOX1-223ENST00000620507 IGHG4P01861 327 aa6.99□□□□□ -1.29
RBFOX1-223ENST00000620507 Q6ZS46 218 aa6.99□□□□□ -1.29
RBFOX1-223ENST00000620507 U3KQE9 123 aa6.99□□□□□ -1.29
RBFOX1-223ENST00000620507 APOMO95445 188 aa6.99□□□□□ -1.29
RBFOX1-223ENST00000620507 PRSS2P07478 247 aa6.99□□□□□ -1.29
RBFOX1-223ENST00000620507 SPINK8P0C7L1 97 aa6.98□□□□□ -1.29
RBFOX1-223ENST00000620507 HLA-DRB4P13762 266 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms