RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 CDKN1BP46527 198 aa10.78□□□□□ -0.68
CIITA-213ENST00000618327 ATP6V0BQ99437 205 aa10.78□□□□□ -0.68
CIITA-213ENST00000618327 CCL24O00175 119 aa10.77□□□□□ -0.68
CIITA-213ENST00000618327 Q6ZWC4 215 aa10.77□□□□□ -0.68
CIITA-213ENST00000618327 AGPAT4-IT1Q9H0P7 198 aa10.77□□□□□ -0.68
CIITA-213ENST00000618327 LRRK2Q5S007 2527 aa10.77□□□□□ -0.69
CIITA-213ENST00000618327 CRYGBP07316 175 aa10.77□□□□□ -0.69
CIITA-213ENST00000618327 EBI3Q14213 229 aa10.77□□□□□ -0.69
CIITA-213ENST00000618327 PRSS57Q6UWY2 283 aa10.77□□□□□ -0.69
CIITA-213ENST00000618327 ZNF462Q96JM2 2506 aa10.77□□□□□ -0.69
CIITA-213ENST00000618327 IGKV1D-37A0A075B6S9 117 aa10.77□□□□□ -0.69
CIITA-213ENST00000618327 LAMTOR3Q9UHA4 124 aa10.77□□□□□ -0.69
CIITA-213ENST00000618327 USP9XQ93008 2570 aaPredicted RBP10.77□□□□□ -0.69
CIITA-213ENST00000618327 C9orf118A6NHY6 69 aa10.76□□□□□ -0.69
CIITA-213ENST00000618327 LINC01548A6NM66 108 aa10.76□□□□□ -0.69
CIITA-213ENST00000618327 IGLL1P15814 213 aa10.76□□□□□ -0.69
CIITA-213ENST00000618327 GAGE1Q13065 139 aa10.76□□□□□ -0.69
CIITA-213ENST00000618327 MRPL53Q96EL3 112 aaKnown RBP10.76□□□□□ -0.69
CIITA-213ENST00000618327 TLN2Q9Y4G6 2542 aa10.76□□□□□ -0.69
CIITA-213ENST00000618327 PKD1L2Q7Z442 2459 aa10.76□□□□□ -0.69
CIITA-213ENST00000618327 KNCNA6PVL3 124 aa10.76□□□□□ -0.69
CIITA-213ENST00000618327 SLURP1P55000 103 aa10.76□□□□□ -0.69
CIITA-213ENST00000618327 C9orf153Q5TBE3 101 aa10.76□□□□□ -0.69
CIITA-213ENST00000618327 RASL10AQ92737 203 aa10.76□□□□□ -0.69
CIITA-213ENST00000618327 KLK9Q9UKQ9 250 aa10.76□□□□□ -0.69
CIITA-213ENST00000618327 TRAV12-2A0A075B6T6 113 aa10.76□□□□□ -0.69
CIITA-213ENST00000618327 A0A087WWL8 130 aa10.76□□□□□ -0.69
CIITA-213ENST00000618327 F6UB75 175 aa10.76□□□□□ -0.69
CIITA-213ENST00000618327 HIST2H2BCQ6DN03 193 aa10.76□□□□□ -0.69
CIITA-213ENST00000618327 ZNF625Q96I27 306 aaPredicted RBP10.76□□□□□ -0.69
CIITA-213ENST00000618327 LAMA2P24043 3122 aaKnown RBP10.75□□□□□ -0.69
CIITA-213ENST00000618327 TRBV20-1A0A075B6N2 111 aa10.75□□□□□ -0.69
CIITA-213ENST00000618327 ANXA2RQ3ZCQ2 193 aa10.75□□□□□ -0.69
CIITA-213ENST00000618327 IGHV1OR15-1A0A075B7D0 117 aa10.75□□□□□ -0.69
CIITA-213ENST00000618327 TMEM89A2RUT3 159 aa10.75□□□□□ -0.69
CIITA-213ENST00000618327 PRRC2AP48634 2157 aaKnown RBP10.75□□□□□ -0.69
CIITA-213ENST00000618327 MYMXA0A1B0GTQ4 84 aa10.75□□□□□ -0.69
CIITA-213ENST00000618327 C16orf54Q6UWD8 224 aa10.75□□□□□ -0.69
CIITA-213ENST00000618327 A0A1W2PPR1 153 aa10.75□□□□□ -0.69
CIITA-213ENST00000618327 RPL36AP83881 106 aaKnown RBP10.75□□□□□ -0.69
CIITA-213ENST00000618327 FAM104BQ5XKR9 115 aa10.75□□□□□ -0.69
CIITA-213ENST00000618327 RPL36ALQ969Q0 106 aaKnown RBP10.75□□□□□ -0.69
CIITA-213ENST00000618327 TIMM21Q9BVV7 248 aa10.75□□□□□ -0.69
CIITA-213ENST00000618327 RBAKDNA6NC62 111 aa10.74□□□□□ -0.69
CIITA-213ENST00000618327 PRIMA1Q86XR5 153 aa10.74□□□□□ -0.69
CIITA-213ENST00000618327 PPDPFLQ8WWR9 84 aa10.74□□□□□ -0.69
CIITA-213ENST00000618327 C1orf159Q96HA4 380 aa10.74□□□□□ -0.69
CIITA-213ENST00000618327 GAGE2AQ6NT46 116 aa10.74□□□□□ -0.69
CIITA-213ENST00000618327 HCFC1P51610 2035 aa10.74□□□□□ -0.69
CIITA-213ENST00000618327 A0A087WX48 190 aa10.74□□□□□ -0.69
CIITA-213ENST00000618327 IGHV3-53P01767 116 aa10.74□□□□□ -0.69
CIITA-213ENST00000618327 DNAJC30Q96LL9 226 aa10.74□□□□□ -0.69
CIITA-213ENST00000618327 SPXQ9BT56 116 aa10.74□□□□□ -0.69
CIITA-213ENST00000618327 EPG5Q9HCE0 2579 aa10.73□□□□□ -0.69
CIITA-213ENST00000618327 IGHV4OR15-8A0A075B7B6 117 aa10.73□□□□□ -0.69
CIITA-213ENST00000618327 A0A087WW49 117 aa10.73□□□□□ -0.69
CIITA-213ENST00000618327 CITED1Q99966 193 aa10.73□□□□□ -0.69
CIITA-213ENST00000618327 LENEPQ9Y5L5 61 aa10.73□□□□□ -0.69
CIITA-213ENST00000618327 FOXI2Q6ZQN5 318 aa10.73□□□□□ -0.69
CIITA-213ENST00000618327 OVOL2Q9BRP0 275 aa10.73□□□□□ -0.69
CIITA-213ENST00000618327 F8W1H4 67 aa10.72□□□□□ -0.69
CIITA-213ENST00000618327 NEGR1Q7Z3B1 354 aa10.72□□□□□ -0.69
CIITA-213ENST00000618327 GPHB5Q86YW7 130 aa10.72□□□□□ -0.69
CIITA-213ENST00000618327 IGF1P05019 195 aa10.72□□□□□ -0.69
CIITA-213ENST00000618327 COX8AP10176 69 aa10.72□□□□□ -0.69
CIITA-213ENST00000618327 C6orf226Q5I0X4 101 aa10.72□□□□□ -0.69
CIITA-213ENST00000618327 K7EMT4 169 aa10.72□□□□□ -0.69
CIITA-213ENST00000618327 LEPROTO15243 131 aa10.72□□□□□ -0.69
CIITA-213ENST00000618327 PRADC1Q9BSG0 188 aa10.72□□□□□ -0.69
CIITA-213ENST00000618327 PTPRBP23467 1997 aa10.72□□□□□ -0.69
CIITA-213ENST00000618327 K7EP34 96 aa10.71□□□□□ -0.69
CIITA-213ENST00000618327 TRBV12-3P01733 135 aa10.71□□□□□ -0.69
CIITA-213ENST00000618327 EGR2P11161 476 aaPredicted RBP10.71□□□□□ -0.69
CIITA-213ENST00000618327 CCDC140Q96MF4 163 aa10.71□□□□□ -0.69
CIITA-213ENST00000618327 H3BMM0 161 aa10.71□□□□□ -0.7
CIITA-213ENST00000618327 Q6YL49 198 aa10.71□□□□□ -0.7
CIITA-213ENST00000618327 UBE2WQ96B02 151 aa10.71□□□□□ -0.7
CIITA-213ENST00000618327 VWC2LB2RUY7 222 aa10.7□□□□□ -0.7
CIITA-213ENST00000618327 INAFM2P0DMQ5 153 aa10.7□□□□□ -0.7
CIITA-213ENST00000618327 GAGE12HA6NDE8 117 aa10.7□□□□□ -0.7
CIITA-213ENST00000618327 DNAJC9-AS1A6NH13 148 aa10.7□□□□□ -0.7
CIITA-213ENST00000618327 BVES-AS1Q5T3Y7 98 aa10.7□□□□□ -0.7
CIITA-213ENST00000618327 C2orf66Q6UXQ4 117 aa10.7□□□□□ -0.7
CIITA-213ENST00000618327 UNQ9165/PRO28630Q6UXU0 137 aa10.7□□□□□ -0.7
CIITA-213ENST00000618327 TRAV13-1A0A0B4J241 112 aa10.7□□□□□ -0.7
CIITA-213ENST00000618327 ZNF503Q96F45 646 aa10.7□□□□□ -0.7
CIITA-213ENST00000618327 IGF2BP2-AS1Q96M15 143 aa10.7□□□□□ -0.7
CIITA-213ENST00000618327 IGHG4P01861 327 aa10.69□□□□□ -0.7
CIITA-213ENST00000618327 PCSK5Q92824 1860 aa10.69□□□□□ -0.7
CIITA-213ENST00000618327 C2orf70A6NJV1 201 aa10.69□□□□□ -0.7
CIITA-213ENST00000618327 PLA2G2AP14555 144 aa10.69□□□□□ -0.7
CIITA-213ENST00000618327 MRPL51Q4U2R6 128 aaKnown RBP10.69□□□□□ -0.7
CIITA-213ENST00000618327 DEFB130BP0DP73 79 aa10.69□□□□□ -0.7
CIITA-213ENST00000618327 DEFB130AP0DP74 79 aa10.69□□□□□ -0.7
CIITA-213ENST00000618327 LGALS9BQ3B8N2 356 aa10.69□□□□□ -0.7
CIITA-213ENST00000618327 LGALS9CQ6DKI2 356 aa10.69□□□□□ -0.7
CIITA-213ENST00000618327 A0A1W2PPM0 123 aa10.68□□□□□ -0.7
CIITA-213ENST00000618327 PRUNE2Q8WUY3 3088 aa10.68□□□□□ -0.7
CIITA-213ENST00000618327 IGHV1-24A0A0C4DH33 117 aa10.68□□□□□ -0.7
CIITA-213ENST00000618327 RHODO00212 210 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms