RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 ZFHX3Q15911 3703 aa11.84□□□□□ -0.51
NOP56-220ENST00000616692 NAV3Q8IVL0 2385 aa11.84□□□□□ -0.51
NOP56-220ENST00000616692 IGLV3-1P01715 115 aa11.84□□□□□ -0.51
NOP56-220ENST00000616692 FBN3Q75N90 2809 aa11.84□□□□□ -0.51
NOP56-220ENST00000616692 NDUFC2-KCTD14E9PQ53 114 aa11.83□□□□□ -0.51
NOP56-220ENST00000616692 B3GALT5-AS1P59052 145 aa11.83□□□□□ -0.51
NOP56-220ENST00000616692 BORCS8Q96FH0 119 aa11.83□□□□□ -0.51
NOP56-220ENST00000616692 AMMECR1Q9Y4X0 333 aaPredicted RBP11.83□□□□□ -0.51
NOP56-220ENST00000616692 C15orf61A6NNL5 157 aa11.83□□□□□ -0.52
NOP56-220ENST00000616692 P01737 135 aa11.83□□□□□ -0.52
NOP56-220ENST00000616692 ACYP1P07311 99 aa11.83□□□□□ -0.52
NOP56-220ENST00000616692 CCL8P80075 99 aa11.83□□□□□ -0.52
NOP56-220ENST00000616692 C17orf77Q96MU5 243 aa11.83□□□□□ -0.52
NOP56-220ENST00000616692 SERP1Q9Y6X1 66 aa11.83□□□□□ -0.52
NOP56-220ENST00000616692 PRSS1P07477 247 aa11.83□□□□□ -0.52
NOP56-220ENST00000616692 ATXN8Q156A1 80 aa11.83□□□□□ -0.52
NOP56-220ENST00000616692 MDFIQ99750 246 aa11.83□□□□□ -0.52
NOP56-220ENST00000616692 ZNF492Q9P255 531 aa11.83□□□□□ -0.52
NOP56-220ENST00000616692 NIPBLQ6KC79 2804 aaeCLIP11.83□□□□□ -0.521e-18■■□□□ 11.4
NOP56-220ENST00000616692 FLNAP21333 2647 aaKnown RBP11.82□□□□□ -0.52
NOP56-220ENST00000616692 FAM90A20PA6NIJ5 464 aa11.82□□□□□ -0.52
NOP56-220ENST00000616692 P0C879 139 aa11.82□□□□□ -0.52
NOP56-220ENST00000616692 LINC01559Q495D7 138 aa11.82□□□□□ -0.52
NOP56-220ENST00000616692 OTORQ9NRC9 128 aa11.82□□□□□ -0.52
NOP56-220ENST00000616692 IGLV3-32A0A0A0MS00 114 aa11.82□□□□□ -0.52
NOP56-220ENST00000616692 SRRM4A7MD48 611 aaKnown RBP11.82□□□□□ -0.52
NOP56-220ENST00000616692 FAM90A22PA8MWA6 464 aa11.82□□□□□ -0.52
NOP56-220ENST00000616692 LEPP41159 167 aa11.82□□□□□ -0.52
NOP56-220ENST00000616692 SERP2Q8N6R1 65 aa11.82□□□□□ -0.52
NOP56-220ENST00000616692 NSUN5P1Q3KNT7 163 aa11.81□□□□□ -0.52
NOP56-220ENST00000616692 ZNF524Q96C55 264 aa11.81□□□□□ -0.52
NOP56-220ENST00000616692 METTL26Q96S19 204 aa11.81□□□□□ -0.52
NOP56-220ENST00000616692 NSD1Q96L73 2696 aaPredicted RBP11.81□□□□□ -0.52
NOP56-220ENST00000616692 H3BT86 120 aa11.81□□□□□ -0.52
NOP56-220ENST00000616692 HSPB6O14558 160 aa11.81□□□□□ -0.52
NOP56-220ENST00000616692 IGKV1-12A0A0C4DH73 117 aa11.8□□□□□ -0.52
NOP56-220ENST00000616692 IGKV1D-12P01611 117 aa11.8□□□□□ -0.52
NOP56-220ENST00000616692 IGLV2-14P01704 120 aa11.8□□□□□ -0.52
NOP56-220ENST00000616692 SPINK9Q5DT21 86 aa11.8□□□□□ -0.52
NOP56-220ENST00000616692 IGKV1-27A0A075B6S5 117 aa11.8□□□□□ -0.52
NOP56-220ENST00000616692 TRAV40A0A0B4J280 105 aa11.8□□□□□ -0.52
NOP56-220ENST00000616692 FAM90A7PA6NKC0 464 aa11.8□□□□□ -0.52
NOP56-220ENST00000616692 FAM90A12PA8MX19 464 aa11.8□□□□□ -0.52
NOP56-220ENST00000616692 LYZL6O75951 148 aa11.8□□□□□ -0.52
NOP56-220ENST00000616692 P0DMU3 169 aa11.8□□□□□ -0.52
NOP56-220ENST00000616692 FAM231AP0DMU4 169 aa11.8□□□□□ -0.52
NOP56-220ENST00000616692 FAM231CP0DMU5 169 aa11.8□□□□□ -0.52
NOP56-220ENST00000616692 RIGQ13278 110 aa11.8□□□□□ -0.52
NOP56-220ENST00000616692 HRNRQ86YZ3 2850 aaPredicted RBP11.79□□□□□ -0.52
NOP56-220ENST00000616692 MKXQ8IYA7 352 aa11.79□□□□□ -0.52
NOP56-220ENST00000616692 ACANP16112 2415 aa11.79□□□□□ -0.52
NOP56-220ENST00000616692 SMIM26A0A096LP01 95 aa11.79□□□□□ -0.52
NOP56-220ENST00000616692 A0A1B0GUT8 65 aa11.79□□□□□ -0.52
NOP56-220ENST00000616692 C1orf158Q8N1D5 194 aa11.79□□□□□ -0.52
NOP56-220ENST00000616692 U3KQK5 164 aa11.79□□□□□ -0.52
NOP56-220ENST00000616692 INAFM1C9JVW0 142 aa11.78□□□□□ -0.52
NOP56-220ENST00000616692 SS18L1O75177 396 aaPredicted RBP11.78□□□□□ -0.52
NOP56-220ENST00000616692 CDAP32320 146 aa11.78□□□□□ -0.52
NOP56-220ENST00000616692 C2orf82Q6UX34 121 aa11.78□□□□□ -0.52
NOP56-220ENST00000616692 D6R8Y8 96 aa11.78□□□□□ -0.52
NOP56-220ENST00000616692 RPL18AQ02543 176 aaKnown RBP11.78□□□□□ -0.52
NOP56-220ENST00000616692 LINC00322Q6ZN03 302 aaPredicted RBP11.78□□□□□ -0.52
NOP56-220ENST00000616692 CD177Q8N6Q3 437 aa11.78□□□□□ -0.52
NOP56-220ENST00000616692 CNEP1R1Q8N9A8 125 aa11.78□□□□□ -0.52
NOP56-220ENST00000616692 C1orf159Q96HA4 380 aa11.78□□□□□ -0.52
NOP56-220ENST00000616692 PRO1854Q9UHT4 67 aa11.78□□□□□ -0.52
NOP56-220ENST00000616692 DNHD1Q96M86 4753 aa11.78□□□□□ -0.52
NOP56-220ENST00000616692 PRR20EP86478 221 aa11.77□□□□□ -0.52
NOP56-220ENST00000616692 PRR20CP86479 221 aa11.77□□□□□ -0.52
NOP56-220ENST00000616692 PRR20DP86480 221 aa11.77□□□□□ -0.52
NOP56-220ENST00000616692 PRR20BP86481 221 aa11.77□□□□□ -0.52
NOP56-220ENST00000616692 PRR20AP86496 221 aa11.77□□□□□ -0.52
NOP56-220ENST00000616692 PRSS46E5RG02 174 aa11.77□□□□□ -0.53
NOP56-220ENST00000616692 OVOL3O00110 214 aa11.77□□□□□ -0.53
NOP56-220ENST00000616692 TCRAP04437 139 aa11.77□□□□□ -0.53
NOP56-220ENST00000616692 CFC1BP0CG36 223 aa11.77□□□□□ -0.53
NOP56-220ENST00000616692 CFC1P0CG37 223 aa11.77□□□□□ -0.53
NOP56-220ENST00000616692 FOXL2NBQ6ZUU3 175 aa11.77□□□□□ -0.53
NOP56-220ENST00000616692 M0R135 149 aa11.76□□□□□ -0.53
NOP56-220ENST00000616692 KRTAP1-1Q07627 177 aa11.76□□□□□ -0.53
NOP56-220ENST00000616692 SMCR5Q8TEV8 140 aa11.76□□□□□ -0.53
NOP56-220ENST00000616692 NNATQ16517 81 aa11.76□□□□□ -0.53
NOP56-220ENST00000616692 FP248Q71RG6 208 aaPredicted RBP11.76□□□□□ -0.53
NOP56-220ENST00000616692 MRPL35Q9NZE8 188 aaKnown RBP11.76□□□□□ -0.53
NOP56-220ENST00000616692 PCBD1P61457 104 aa11.75□□□□□ -0.53
NOP56-220ENST00000616692 ZNF329Q86UD4 541 aa11.75□□□□□ -0.53
NOP56-220ENST00000616692 Q8N8P6 123 aa11.75□□□□□ -0.53
NOP56-220ENST00000616692 HS3ST6Q96QI5 342 aa11.75□□□□□ -0.53
NOP56-220ENST00000616692 FN1P02751 2386 aaKnown RBP11.75□□□□□ -0.53
NOP56-220ENST00000616692 ORMDL3Q8N138 153 aa11.75□□□□□ -0.53
NOP56-220ENST00000616692 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.74□□□□□ -0.53
NOP56-220ENST00000616692 ITLN1Q8WWA0 313 aa11.74□□□□□ -0.53
NOP56-220ENST00000616692 ARMS2P0C7Q2 107 aa11.74□□□□□ -0.53
NOP56-220ENST00000616692 SYNJ2BPP57105 145 aa11.74□□□□□ -0.53
NOP56-220ENST00000616692 RNF182Q8N6D2 247 aa11.74□□□□□ -0.53
NOP56-220ENST00000616692 TRAV26-2A0A0B4J265 109 aa11.73□□□□□ -0.53
NOP56-220ENST00000616692 PLNP26678 52 aa11.73□□□□□ -0.53
NOP56-220ENST00000616692 DSCR9P59020 149 aa11.73□□□□□ -0.53
NOP56-220ENST00000616692 GNG12Q9UBI6 72 aa11.73□□□□□ -0.53
NOP56-220ENST00000616692 ZNF469Q96JG9 3925 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms