RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 RNASE3P12724 160 aaKnown RBP13.85□□□□□ -0.19
TRAPPC3-208ENST00000616074 FLI1Q01543 452 aaPredicted RBP13.85□□□□□ -0.19
TRAPPC3-208ENST00000616074 SMUG1Q53HV7 270 aa13.85□□□□□ -0.19
TRAPPC3-208ENST00000616074 PRNTQ86SH4 94 aa13.85□□□□□ -0.19
TRAPPC3-208ENST00000616074 PTH2Q96A98 100 aa13.85□□□□□ -0.19
TRAPPC3-208ENST00000616074 GTSF1LQ9H1H1 148 aa13.85□□□□□ -0.19
TRAPPC3-208ENST00000616074 FAM229AH3BQW9 127 aa13.84□□□□□ -0.19
TRAPPC3-208ENST00000616074 MGST1P10620 155 aaKnown RBP13.84□□□□□ -0.19
TRAPPC3-208ENST00000616074 ATP6V0CP27449 155 aa13.84□□□□□ -0.19
TRAPPC3-208ENST00000616074 SUMO1P63165 101 aaKnown RBP13.84□□□□□ -0.19
TRAPPC3-208ENST00000616074 ZFP69Q49AA0 526 aa13.84□□□□□ -0.19
TRAPPC3-208ENST00000616074 ATP6V0E2Q8NHE4 81 aa13.84□□□□□ -0.19
TRAPPC3-208ENST00000616074 PSMG3Q9BT73 122 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC3-208ENST00000616074 EPDR1Q9UM22 224 aa13.84□□□□□ -0.19
TRAPPC3-208ENST00000616074 Q8N3U1 123 aa13.83□□□□□ -0.2
TRAPPC3-208ENST00000616074 CYB561D1Q8N8Q1 229 aa13.83□□□□□ -0.2
TRAPPC3-208ENST00000616074 FAM30AQ9NZY2 134 aa13.83□□□□□ -0.2
TRAPPC3-208ENST00000616074 LAGE3Q14657 143 aa13.82□□□□□ -0.2
TRAPPC3-208ENST00000616074 Q6ZSN1 163 aa13.82□□□□□ -0.2
TRAPPC3-208ENST00000616074 ALG5Q9Y673 324 aa13.82□□□□□ -0.2
TRAPPC3-208ENST00000616074 WFDC2Q14508 124 aa13.81□□□□□ -0.2
TRAPPC3-208ENST00000616074 AQP10Q96PS8 301 aa13.81□□□□□ -0.2
TRAPPC3-208ENST00000616074 SH3BGRL3Q9H299 93 aa13.81□□□□□ -0.2
TRAPPC3-208ENST00000616074 PARLQ9H300 379 aa13.81□□□□□ -0.2
TRAPPC3-208ENST00000616074 TMEM167BQ9NRX6 74 aa13.81□□□□□ -0.2
TRAPPC3-208ENST00000616074 IGKV3D-20A0A0C4DH25 116 aa13.8□□□□□ -0.2
TRAPPC3-208ENST00000616074 CXorf1O96002 111 aa13.8□□□□□ -0.2
TRAPPC3-208ENST00000616074 MBP02144 154 aa13.8□□□□□ -0.2
TRAPPC3-208ENST00000616074 LINC00694P0DN24 101 aa13.8□□□□□ -0.2
TRAPPC3-208ENST00000616074 SERF2P84101 59 aa13.8□□□□□ -0.2
TRAPPC3-208ENST00000616074 GAGE12JA6NER3 117 aa13.79□□□□□ -0.2
TRAPPC3-208ENST00000616074 GAGE1Q13065 139 aa13.79□□□□□ -0.2
TRAPPC3-208ENST00000616074 GAGE4Q13068 117 aa13.79□□□□□ -0.2
TRAPPC3-208ENST00000616074 GAGE5Q13069 117 aa13.79□□□□□ -0.2
TRAPPC3-208ENST00000616074 GAGE13Q4V321 117 aa13.79□□□□□ -0.2
TRAPPC3-208ENST00000616074 SAPCD1Q5SSQ6 148 aa13.79□□□□□ -0.2
TRAPPC3-208ENST00000616074 LINC00479Q96M42 142 aa13.79□□□□□ -0.2
TRAPPC3-208ENST00000616074 ACTR3CQ9C0K3 210 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC3-208ENST00000616074 TRAV34A0A0B4J273 112 aa13.78□□□□□ -0.2
TRAPPC3-208ENST00000616074 A8MWV9 139 aa13.78□□□□□ -0.2
TRAPPC3-208ENST00000616074 ZFP2Q6ZN57 461 aa13.78□□□□□ -0.2
TRAPPC3-208ENST00000616074 TM2D2Q9BX73 214 aa13.78□□□□□ -0.2
TRAPPC3-208ENST00000616074 TNFSF18Q9UNG2 199 aa13.78□□□□□ -0.2
TRAPPC3-208ENST00000616074 S100A4P26447 101 aaKnown RBP13.77□□□□□ -0.21
TRAPPC3-208ENST00000616074 LGALSLQ3ZCW2 172 aaPredicted RBP13.77□□□□□ -0.21
TRAPPC3-208ENST00000616074 JPT2Q9H910 190 aa13.77□□□□□ -0.21
TRAPPC3-208ENST00000616074 Q9UF83 564 aa13.77□□□□□ -0.21
TRAPPC3-208ENST00000616074 ARL2-SNX15V9GYD0 113 aa13.77□□□□□ -0.21
TRAPPC3-208ENST00000616074 A0A1W2PRE2 83 aa13.76□□□□□ -0.21
TRAPPC3-208ENST00000616074 C1QBP02746 253 aa13.76□□□□□ -0.21
TRAPPC3-208ENST00000616074 ASIPP42127 132 aa13.76□□□□□ -0.21
TRAPPC3-208ENST00000616074 PIK3CD-AS1Q5SR53 167 aa13.76□□□□□ -0.21
TRAPPC3-208ENST00000616074 DAZ4Q86SG3 579 aaKnown RBP13.76□□□□□ -0.21
TRAPPC3-208ENST00000616074 OR2T35Q8NGX2 323 aa13.76□□□□□ -0.21
TRAPPC3-208ENST00000616074 DAZ3Q9NR90 486 aaKnown RBP13.76□□□□□ -0.21
TRAPPC3-208ENST00000616074 LECT2O14960 151 aa13.75□□□□□ -0.21
TRAPPC3-208ENST00000616074 Q5BKY6 102 aa13.75□□□□□ -0.21
TRAPPC3-208ENST00000616074 UFSP1Q6NVU6 142 aa13.75□□□□□ -0.21
TRAPPC3-208ENST00000616074 C14orf178Q8N769 122 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC3-208ENST00000616074 SAMD10Q9BYL1 202 aa13.75□□□□□ -0.21
TRAPPC3-208ENST00000616074 TRAV8-3A0A0A6YYJ7 113 aa13.74□□□□□ -0.21
TRAPPC3-208ENST00000616074 FABP5P3A8MUU1 101 aa13.74□□□□□ -0.21
TRAPPC3-208ENST00000616074 ZNF726P1Q15940 193 aa13.74□□□□□ -0.21
TRAPPC3-208ENST00000616074 IL36BQ9NZH7 164 aa13.74□□□□□ -0.21
TRAPPC3-208ENST00000616074 H3BVH4 76 aa13.73□□□□□ -0.21
TRAPPC3-208ENST00000616074 UBE2G2P60604 165 aa13.73□□□□□ -0.21
TRAPPC3-208ENST00000616074 RPL7L1Q6DKI1 246 aaKnown RBP13.73□□□□□ -0.21
TRAPPC3-208ENST00000616074 Q6ZSA8 131 aa13.73□□□□□ -0.21
TRAPPC3-208ENST00000616074 Q86TA4 180 aa13.73□□□□□ -0.21
TRAPPC3-208ENST00000616074 MED28Q9H204 178 aa13.73□□□□□ -0.21
TRAPPC3-208ENST00000616074 B4DEV8 164 aa13.72□□□□□ -0.21
TRAPPC3-208ENST00000616074 PEX7O00628 323 aa13.72□□□□□ -0.21
TRAPPC3-208ENST00000616074 IFNA7P01567 189 aa13.72□□□□□ -0.21
TRAPPC3-208ENST00000616074 TOR2AQ5JU69 321 aa13.72□□□□□ -0.21
TRAPPC3-208ENST00000616074 DMRTA1Q5VZB9 504 aa13.72□□□□□ -0.21
TRAPPC3-208ENST00000616074 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC3-208ENST00000616074 CRIP1P50238 77 aa13.71□□□□□ -0.21
TRAPPC3-208ENST00000616074 FGF8P55075 233 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC3-208ENST00000616074 A0A087WWC5 75 aa13.7□□□□□ -0.22
TRAPPC3-208ENST00000616074 CTXND1A0A1B0GTU2 59 aa13.7□□□□□ -0.22
TRAPPC3-208ENST00000616074 RNF222A6NCQ9 220 aa13.7□□□□□ -0.22
TRAPPC3-208ENST00000616074 BAALCQ8WXS3 180 aa13.7□□□□□ -0.22
TRAPPC3-208ENST00000616074 ZC2HC1AQ96GY0 325 aa13.7□□□□□ -0.22
TRAPPC3-208ENST00000616074 FAM74A7A6NL05 159 aa13.69□□□□□ -0.22
TRAPPC3-208ENST00000616074 KRBOX1C9JBD0 128 aa13.69□□□□□ -0.22
TRAPPC3-208ENST00000616074 M0R036 132 aa13.69□□□□□ -0.22
TRAPPC3-208ENST00000616074 ARMS2P0C7Q2 107 aa13.69□□□□□ -0.22
TRAPPC3-208ENST00000616074 DNLZQ5SXM8 178 aa13.69□□□□□ -0.22
TRAPPC3-208ENST00000616074 SYT8Q8NBV8 401 aa13.69□□□□□ -0.22
TRAPPC3-208ENST00000616074 INO80EQ8NBZ0 244 aaPredicted RBP13.69□□□□□ -0.22
TRAPPC3-208ENST00000616074 DNAJC30Q96LL9 226 aa13.69□□□□□ -0.22
TRAPPC3-208ENST00000616074 BORCS7-ASMTA0A0B4J1R7 106 aa13.68□□□□□ -0.22
TRAPPC3-208ENST00000616074 GRIFINA4D1Z8 144 aa13.68□□□□□ -0.22
TRAPPC3-208ENST00000616074 RHODO00212 210 aa13.68□□□□□ -0.22
TRAPPC3-208ENST00000616074 SH2D1AO60880 128 aa13.68□□□□□ -0.22
TRAPPC3-208ENST00000616074 PTTG1O95997 202 aa13.68□□□□□ -0.22
TRAPPC3-208ENST00000616074 GIPP09681 153 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC3-208ENST00000616074 FAM74A4Q5TZK3 123 aa13.68□□□□□ -0.22
TRAPPC3-208ENST00000616074 LINC00528Q8N1L1 170 aa13.68□□□□□ -0.22
TRAPPC3-208ENST00000616074 OR11H4Q8NGC9 324 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms