RNA–Protein interactions for RNA: ENST00000612455.1

CCND3-222, Transcript of cyclin D3, human

Gene CCND3, Length 536 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCND3-222	ENST00000612455	FAM162B	Q5T6X4	162 aa		11.5	□□□□□ -0.57
CCND3-222	ENST00000612455	CFAP126	Q5VTH2	177 aa		11.5	□□□□□ -0.57
CCND3-222	ENST00000612455	MLST8	Q9BVC4	326 aa		11.5	□□□□□ -0.57
CCND3-222	ENST00000612455	MANBAL	Q9NQG1	85 aa		11.5	□□□□□ -0.57
CCND3-222	ENST00000612455	IL36B	Q9NZH7	164 aa		11.5	□□□□□ -0.57
CCND3-222	ENST00000612455		B4DEV8	164 aa		11.49	□□□□□ -0.57
CCND3-222	ENST00000612455		K7EQD1	137 aa		11.49	□□□□□ -0.57
CCND3-222	ENST00000612455	ORM1	P02763	201 aa		11.49	□□□□□ -0.57
CCND3-222	ENST00000612455	GATA1	P15976	413 aa	Predicted RBP	11.49	□□□□□ -0.57
CCND3-222	ENST00000612455	ZNF506	Q5JVG8	444 aa		11.49	□□□□□ -0.57
CCND3-222	ENST00000612455	C1orf134	Q5TEV5	83 aa		11.49	□□□□□ -0.57
CCND3-222	ENST00000612455	LYPD5	Q6UWN5	251 aa		11.49	□□□□□ -0.57
CCND3-222	ENST00000612455	TXNDC17	Q9BRA2	123 aa		11.49	□□□□□ -0.57
CCND3-222	ENST00000612455	HECTD4	Q9Y4D8	3996 aa		11.49	□□□□□ -0.57
CCND3-222	ENST00000612455		A0A1B0GVY2	172 aa		11.48	□□□□□ -0.57
CCND3-222	ENST00000612455	ASIP	P42127	132 aa		11.48	□□□□□ -0.57
CCND3-222	ENST00000612455	LINC01559	Q495D7	138 aa		11.48	□□□□□ -0.57
CCND3-222	ENST00000612455	NEGR1	Q7Z3B1	354 aa		11.48	□□□□□ -0.57
CCND3-222	ENST00000612455	C11orf52	Q96A22	123 aa		11.48	□□□□□ -0.57
CCND3-222	ENST00000612455	PRSS29P	A6NIE9	313 aa		11.47	□□□□□ -0.57
CCND3-222	ENST00000612455	TEX46	H3BTG2	121 aa		11.47	□□□□□ -0.57
CCND3-222	ENST00000612455	GYPE	P15421	78 aa		11.47	□□□□□ -0.57
CCND3-222	ENST00000612455	S100A4	P26447	101 aa	Known RBP	11.47	□□□□□ -0.57
CCND3-222	ENST00000612455	SOHLH1	Q5JUK2	328 aa		11.47	□□□□□ -0.57
CCND3-222	ENST00000612455	BAGE2	Q86Y30	109 aa		11.47	□□□□□ -0.57
CCND3-222	ENST00000612455	GNG13	Q9P2W3	67 aa		11.47	□□□□□ -0.57
CCND3-222	ENST00000612455		A0A1B0GVG6	124 aa		11.46	□□□□□ -0.57
CCND3-222	ENST00000612455		A0A1W2PPQ1	181 aa		11.46	□□□□□ -0.57
CCND3-222	ENST00000612455	SCRT2	Q9NQ03	307 aa		11.46	□□□□□ -0.57
CCND3-222	ENST00000612455	TRBV6-4	A0A1B0GX49	114 aa		11.45	□□□□□ -0.58
CCND3-222	ENST00000612455		M0R036	132 aa		11.45	□□□□□ -0.58
CCND3-222	ENST00000612455	ARMS2	P0C7Q2	107 aa		11.45	□□□□□ -0.58
CCND3-222	ENST00000612455	SRI	P30626	198 aa		11.45	□□□□□ -0.58
CCND3-222	ENST00000612455	C6orf223	Q8N319	242 aa		11.45	□□□□□ -0.58
CCND3-222	ENST00000612455	SLC25A29	Q8N8R3	303 aa		11.45	□□□□□ -0.58
CCND3-222	ENST00000612455	NHLRC2	Q8NBF2	726 aa		11.45	□□□□□ -0.58
CCND3-222	ENST00000612455	KRTAP1-5	Q9BYS1	174 aa		11.45	□□□□□ -0.58
CCND3-222	ENST00000612455	PKD1	P98161	4303 aa		11.45	□□□□□ -0.58
CCND3-222	ENST00000612455	LOC100131303	A0A0U1RQF7	123 aa		11.44	□□□□□ -0.58
CCND3-222	ENST00000612455	GRIFIN	A4D1Z8	144 aa		11.44	□□□□□ -0.58
CCND3-222	ENST00000612455		A8MWV9	139 aa		11.44	□□□□□ -0.58
CCND3-222	ENST00000612455	TTC32	Q5I0X7	151 aa		11.44	□□□□□ -0.58
CCND3-222	ENST00000612455	DMRTA1	Q5VZB9	504 aa		11.44	□□□□□ -0.58
CCND3-222	ENST00000612455	UFSP1	Q6NVU6	142 aa		11.44	□□□□□ -0.58
CCND3-222	ENST00000612455	ZFP2	Q6ZN57	461 aa		11.44	□□□□□ -0.58
CCND3-222	ENST00000612455	PCNP	Q8WW12	178 aa	Known RBP	11.44	□□□□□ -0.58
CCND3-222	ENST00000612455		H3BVH4	76 aa		11.43	□□□□□ -0.58
CCND3-222	ENST00000612455	SIVA1	O15304	175 aa		11.43	□□□□□ -0.58
CCND3-222	ENST00000612455	NXPH4	O95158	308 aa		11.43	□□□□□ -0.58
CCND3-222	ENST00000612455	CXCL1	P09341	107 aa		11.43	□□□□□ -0.58
CCND3-222	ENST00000612455	BTF3	P20290	206 aa	Known RBP	11.43	□□□□□ -0.58
CCND3-222	ENST00000612455	RPL35	P42766	123 aa	Known RBP	11.43	□□□□□ -0.58
CCND3-222	ENST00000612455	TIRAP	P58753	221 aa		11.43	□□□□□ -0.58
CCND3-222	ENST00000612455	SH2D6	Q7Z4S9	175 aa		11.43	□□□□□ -0.58
CCND3-222	ENST00000612455	PARL	Q9H300	379 aa		11.43	□□□□□ -0.58
CCND3-222	ENST00000612455	IGLV2-8	P01709	118 aa		11.42	□□□□□ -0.58
CCND3-222	ENST00000612455	MGST1	P10620	155 aa	Known RBP	11.42	□□□□□ -0.58
CCND3-222	ENST00000612455	MEF2B	Q02080	365 aa	Predicted RBP	11.42	□□□□□ -0.58
CCND3-222	ENST00000612455	DERL1	Q9BUN8	251 aa		11.42	□□□□□ -0.58
CCND3-222	ENST00000612455	JPT2	Q9H910	190 aa		11.42	□□□□□ -0.58
CCND3-222	ENST00000612455	TMSB15B	A0A087X1C1	80 aa		11.41	□□□□□ -0.58
CCND3-222	ENST00000612455	IGHV3-73	A0A0B4J1V6	119 aa		11.41	□□□□□ -0.58
CCND3-222	ENST00000612455	PDE6D	O43924	150 aa		11.41	□□□□□ -0.58
CCND3-222	ENST00000612455	IFNA1	P01562	189 aa		11.41	□□□□□ -0.58
CCND3-222	ENST00000612455	MED14OS	P0DP75	135 aa		11.41	□□□□□ -0.58
CCND3-222	ENST00000612455	BCL2	P10415	239 aa		11.41	□□□□□ -0.58
CCND3-222	ENST00000612455	RHOH	Q15669	191 aa		11.41	□□□□□ -0.58
CCND3-222	ENST00000612455		Q6ZSN1	163 aa		11.41	□□□□□ -0.58
CCND3-222	ENST00000612455	PRADC1	Q9BSG0	188 aa		11.41	□□□□□ -0.58
CCND3-222	ENST00000612455	TAGLN2	P37802	199 aa	Known RBP	11.4	□□□□□ -0.58
CCND3-222	ENST00000612455	SYT8	Q8NBV8	401 aa		11.4	□□□□□ -0.58
CCND3-222	ENST00000612455	LYPD6B	Q8NI32	183 aa		11.4	□□□□□ -0.58
CCND3-222	ENST00000612455	SFRP2	Q96HF1	295 aa		11.4	□□□□□ -0.58
CCND3-222	ENST00000612455	SSBP4	Q9BWG4	385 aa	Predicted RBP	11.4	□□□□□ -0.58
CCND3-222	ENST00000612455	SAMD10	Q9BYL1	202 aa		11.4	□□□□□ -0.58
CCND3-222	ENST00000612455	VAX2	Q9UIW0	290 aa		11.4	□□□□□ -0.58
CCND3-222	ENST00000612455	BLOC1S1	P78537	153 aa		11.39	□□□□□ -0.59
CCND3-222	ENST00000612455	ALKAL2	Q6UX46	152 aa		11.39	□□□□□ -0.59
CCND3-222	ENST00000612455	SMIM12	Q96EX1	92 aa		11.39	□□□□□ -0.59
CCND3-222	ENST00000612455	PHLDA3	Q9Y5J5	127 aa		11.39	□□□□□ -0.59
CCND3-222	ENST00000612455	PKHD1	P08F94	4074 aa		11.38	□□□□□ -0.59
CCND3-222	ENST00000612455	RAB19	A4D1S5	217 aa		11.38	□□□□□ -0.59
CCND3-222	ENST00000612455	SNAI2	O43623	268 aa		11.38	□□□□□ -0.59
CCND3-222	ENST00000612455	CRYGD	P07320	174 aa		11.38	□□□□□ -0.59
CCND3-222	ENST00000612455	NKX2-5	P52952	324 aa	Predicted RBP	11.38	□□□□□ -0.59
CCND3-222	ENST00000612455	RPL19	P84098	196 aa	Known RBP	11.38	□□□□□ -0.59
CCND3-222	ENST00000612455	TNP2	Q05952	138 aa		11.38	□□□□□ -0.59
CCND3-222	ENST00000612455	MED9	Q9NWA0	146 aa		11.38	□□□□□ -0.59
CCND3-222	ENST00000612455	TRBV20OR9-2	A0A075B6H5	130 aa		11.37	□□□□□ -0.59
CCND3-222	ENST00000612455	C19orf71	A6NCJ1	209 aa		11.37	□□□□□ -0.59
CCND3-222	ENST00000612455	RHOD	O00212	210 aa		11.37	□□□□□ -0.59
CCND3-222	ENST00000612455	OR5AL1	P0C617	328 aa		11.37	□□□□□ -0.59
CCND3-222	ENST00000612455	CENPW	Q5EE01	88 aa		11.37	□□□□□ -0.59
CCND3-222	ENST00000612455	WFDC10B	Q8IUB3	73 aa		11.37	□□□□□ -0.59
CCND3-222	ENST00000612455	ZFP82	Q8N141	532 aa		11.37	□□□□□ -0.59
CCND3-222	ENST00000612455	BOLA1	Q9Y3E2	137 aa		11.37	□□□□□ -0.59
CCND3-222	ENST00000612455	DNAH11	Q96DT5	4516 aa		11.37	□□□□□ -0.59
CCND3-222	ENST00000612455		K7EP13	123 aa		11.36	□□□□□ -0.59
CCND3-222	ENST00000612455	DNAH10OS	P0CZ25	163 aa		11.36	□□□□□ -0.59
CCND3-222	ENST00000612455	LINC00694	P0DN24	101 aa		11.36	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms