RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 MGPP08493 103 aa8.46□□□□□ -1.06
CDH4-202ENST00000611855 GAGE12FP0CL80 117 aa8.46□□□□□ -1.06
CDH4-202ENST00000611855 GAGE12GP0CL81 117 aa8.46□□□□□ -1.06
CDH4-202ENST00000611855 GAGE12IP0CL82 117 aa8.46□□□□□ -1.06
CDH4-202ENST00000611855 GAGE4Q13068 117 aa8.46□□□□□ -1.06
CDH4-202ENST00000611855 LYRM7Q5U5X0 104 aa8.46□□□□□ -1.06
CDH4-202ENST00000611855 GRNP28799 593 aaKnown RBP8.45□□□□□ -1.06
CDH4-202ENST00000611855 Q1RN00 199 aa8.45□□□□□ -1.06
CDH4-202ENST00000611855 SLC25A20O43772 301 aa8.45□□□□□ -1.06
CDH4-202ENST00000611855 CLEC3BP05452 202 aa8.45□□□□□ -1.06
CDH4-202ENST00000611855 NRACQ8N912 160 aa8.45□□□□□ -1.06
CDH4-202ENST00000611855 NDUFV3P56181 108 aaKnown RBP8.44□□□□□ -1.06
CDH4-202ENST00000611855 RPL32P62910 135 aaKnown RBP8.44□□□□□ -1.06
CDH4-202ENST00000611855 C15orf32Q32M92 178 aa8.44□□□□□ -1.06
CDH4-202ENST00000611855 NDUFA11Q86Y39 141 aa8.44□□□□□ -1.06
CDH4-202ENST00000611855 NTN5Q8WTR8 489 aaPredicted RBP8.44□□□□□ -1.06
CDH4-202ENST00000611855 RPL39LQ96EH5 51 aaKnown RBP8.44□□□□□ -1.06
CDH4-202ENST00000611855 TMEM262E9PQX1 116 aa8.44□□□□□ -1.06
CDH4-202ENST00000611855 IGHV4-39P01824 125 aa8.44□□□□□ -1.06
CDH4-202ENST00000611855 LINC01559Q495D7 138 aa8.44□□□□□ -1.06
CDH4-202ENST00000611855 Q6ZS46 218 aa8.44□□□□□ -1.06
CDH4-202ENST00000611855 ZNF672Q499Z4 452 aaPredicted RBP8.44□□□□□ -1.06
CDH4-202ENST00000611855 FAM159AQ6UWV7 190 aa8.44□□□□□ -1.06
CDH4-202ENST00000611855 CLEC19AQ6UXS0 136 aa8.44□□□□□ -1.06
CDH4-202ENST00000611855 SORL1Q92673 2214 aa8.44□□□□□ -1.06
CDH4-202ENST00000611855 PTPRQQ9UMZ3 2332 aa8.43□□□□□ -1.06
CDH4-202ENST00000611855 IGKV3-7A0A075B6H7 116 aa8.43□□□□□ -1.06
CDH4-202ENST00000611855 UBE2D1P51668 147 aa8.43□□□□□ -1.06
CDH4-202ENST00000611855 TMEM170BQ5T4T1 132 aa8.43□□□□□ -1.06
CDH4-202ENST00000611855 C2orf66Q6UXQ4 117 aa8.43□□□□□ -1.06
CDH4-202ENST00000611855 SMIM2Q9BVW6 85 aa8.43□□□□□ -1.06
CDH4-202ENST00000611855 UBE2D3P61077 147 aa8.43□□□□□ -1.06
CDH4-202ENST00000611855 UBE2D2P62837 147 aa8.43□□□□□ -1.06
CDH4-202ENST00000611855 RASL10AQ92737 203 aa8.43□□□□□ -1.06
CDH4-202ENST00000611855 CUBNO60494 3623 aa8.43□□□□□ -1.06
CDH4-202ENST00000611855 G3V318 75 aa8.42□□□□□ -1.06
CDH4-202ENST00000611855 CD3EP07766 207 aa8.42□□□□□ -1.06
CDH4-202ENST00000611855 IFITM1P13164 125 aa8.42□□□□□ -1.06
CDH4-202ENST00000611855 IGFL3Q6UXB1 125 aa8.42□□□□□ -1.06
CDH4-202ENST00000611855 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.42□□□□□ -1.06
CDH4-202ENST00000611855 PSMG3-AS1Q96PY0 264 aa8.42□□□□□ -1.06
CDH4-202ENST00000611855 LINC00527Q9UJ94 153 aa8.42□□□□□ -1.06
CDH4-202ENST00000611855 IGHV3-64A0A075B6Q5 118 aa8.42□□□□□ -1.06
CDH4-202ENST00000611855 IGHV7-4-1A0A0J9YVY3 117 aa8.42□□□□□ -1.06
CDH4-202ENST00000611855 CFC1BP0CG36 223 aa8.42□□□□□ -1.06
CDH4-202ENST00000611855 CFC1P0CG37 223 aa8.42□□□□□ -1.06
CDH4-202ENST00000611855 PRR9Q5T870 116 aa8.42□□□□□ -1.06
CDH4-202ENST00000611855 C14orf178Q8N769 122 aaPredicted RBP8.42□□□□□ -1.06
CDH4-202ENST00000611855 BAALCQ8WXS3 180 aa8.42□□□□□ -1.06
CDH4-202ENST00000611855 CNFNQ9BYD5 112 aa8.42□□□□□ -1.06
CDH4-202ENST00000611855 CD7P09564 240 aa8.42□□□□□ -1.06
CDH4-202ENST00000611855 S100A4P26447 101 aaKnown RBP8.42□□□□□ -1.06
CDH4-202ENST00000611855 CREBBPQ92793 2442 aa8.42□□□□□ -1.06
CDH4-202ENST00000611855 LINC01546A6NGU7 62 aa8.41□□□□□ -1.06
CDH4-202ENST00000611855 PIP4P1Q86T03 277 aa8.41□□□□□ -1.06
CDH4-202ENST00000611855 RNF5Q99942 180 aa8.41□□□□□ -1.06
CDH4-202ENST00000611855 MSRB2Q9Y3D2 182 aa8.41□□□□□ -1.06
CDH4-202ENST00000611855 RHODO00212 210 aa8.41□□□□□ -1.06
CDH4-202ENST00000611855 COX8CQ7Z4L0 72 aa8.41□□□□□ -1.06
CDH4-202ENST00000611855 NEXN-AS1Q8NBZ9 246 aa8.41□□□□□ -1.06
CDH4-202ENST00000611855 VCX2Q9H322 139 aa8.41□□□□□ -1.06
CDH4-202ENST00000611855 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.41□□□□□ -1.06
CDH4-202ENST00000611855 C11orf86A6NJI1 115 aa8.41□□□□□ -1.06
CDH4-202ENST00000611855 B9A039 149 aa8.41□□□□□ -1.06
CDH4-202ENST00000611855 BUB3O43684 328 aa8.41□□□□□ -1.06
CDH4-202ENST00000611855 SUMO2P61956 95 aaKnown RBP8.41□□□□□ -1.06
CDH4-202ENST00000611855 NPBQ8NG41 125 aa8.41□□□□□ -1.06
CDH4-202ENST00000611855 IGHV7-81A0A0B4J1V7 117 aa8.4□□□□□ -1.06
CDH4-202ENST00000611855 TRAV2A0A0B4J234 112 aa8.4□□□□□ -1.06
CDH4-202ENST00000611855 TEX49A0A1B0GTD5 131 aa8.4□□□□□ -1.06
CDH4-202ENST00000611855 DUSP14O95147 198 aaKnown RBP8.4□□□□□ -1.06
CDH4-202ENST00000611855 C10orf126Q8N4M7 172 aa8.4□□□□□ -1.06
CDH4-202ENST00000611855 C15orf53Q8NAA6 179 aa8.4□□□□□ -1.06
CDH4-202ENST00000611855 CITED1Q99966 193 aa8.4□□□□□ -1.06
CDH4-202ENST00000611855 PRO1854Q9UHT4 67 aa8.4□□□□□ -1.06
CDH4-202ENST00000611855 SPG11Q96JI7 2443 aa8.4□□□□□ -1.06
CDH4-202ENST00000611855 TRAV12-1A0A0B4J245 112 aa8.4□□□□□ -1.07
CDH4-202ENST00000611855 ORMDL2Q53FV1 153 aa8.4□□□□□ -1.07
CDH4-202ENST00000611855 ZFYVE26Q68DK2 2539 aa8.4□□□□□ -1.07
CDH4-202ENST00000611855 A0A0J9YY99 117 aa8.39□□□□□ -1.07
CDH4-202ENST00000611855 MEIG1Q5JSS6 88 aa8.39□□□□□ -1.07
CDH4-202ENST00000611855 VMO1Q7Z5L0 202 aa8.39□□□□□ -1.07
CDH4-202ENST00000611855 Q8N1Y9 231 aa8.39□□□□□ -1.07
CDH4-202ENST00000611855 HERVK_113P61574 105 aa8.39□□□□□ -1.07
CDH4-202ENST00000611855 ACACBO00763 2458 aa8.38□□□□□ -1.07
CDH4-202ENST00000611855 TRAV8-4A0A0B4J246 113 aa8.38□□□□□ -1.07
CDH4-202ENST00000611855 A4D1N5 150 aa8.38□□□□□ -1.07
CDH4-202ENST00000611855 ATP6V0E1O15342 81 aa8.38□□□□□ -1.07
CDH4-202ENST00000611855 TOMM6Q96B49 74 aa8.38□□□□□ -1.07
CDH4-202ENST00000611855 ZFAND3Q9H8U3 227 aa8.38□□□□□ -1.07
CDH4-202ENST00000611855 CLPSL1A2RUU4 121 aa8.38□□□□□ -1.07
CDH4-202ENST00000611855 C16orf92Q96LL3 132 aa8.38□□□□□ -1.07
CDH4-202ENST00000611855 F6UB75 175 aa8.37□□□□□ -1.07
CDH4-202ENST00000611855 LINC01619G3V211 115 aa8.37□□□□□ -1.07
CDH4-202ENST00000611855 SRD5A1P18405 259 aa8.37□□□□□ -1.07
CDH4-202ENST00000611855 TSPEAR-AS2P59090 65 aa8.37□□□□□ -1.07
CDH4-202ENST00000611855 FOXC1Q12948 553 aa8.37□□□□□ -1.07
CDH4-202ENST00000611855 Q8NA96 180 aa8.37□□□□□ -1.07
CDH4-202ENST00000611855 RPL39P62891 51 aaKnown RBP8.37□□□□□ -1.07
CDH4-202ENST00000611855 RPL11P62913 178 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms