RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	TRAV8-3	A0A0A6YYJ7	113 aa		13.83	□□□□□ -0.2
NECAB3-222	ENST00000607805		A0A1W2PPV4	95 aa		13.83	□□□□□ -0.2
NECAB3-222	ENST00000607805	UPK1B	O75841	260 aa		13.83	□□□□□ -0.2
NECAB3-222	ENST00000607805	GCG	P01275	180 aa		13.83	□□□□□ -0.2
NECAB3-222	ENST00000607805	TCRA	P04437	139 aa		13.83	□□□□□ -0.2
NECAB3-222	ENST00000607805	INMT-MINDY4	F8WBC2	141 aa		13.82	□□□□□ -0.2
NECAB3-222	ENST00000607805	LECT2	O14960	151 aa		13.82	□□□□□ -0.2
NECAB3-222	ENST00000607805	HMGB3	O15347	200 aa	Known RBP	13.82	□□□□□ -0.2
NECAB3-222	ENST00000607805	IFITM3	Q01628	133 aa		13.82	□□□□□ -0.2
NECAB3-222	ENST00000607805	ZFP2	Q6ZN57	461 aa		13.82	□□□□□ -0.2
NECAB3-222	ENST00000607805	DAZ4	Q86SG3	579 aa	Known RBP	13.82	□□□□□ -0.2
NECAB3-222	ENST00000607805	C5orf17	Q8NAS9	161 aa		13.82	□□□□□ -0.2
NECAB3-222	ENST00000607805	NDFIP1	Q9BT67	221 aa		13.82	□□□□□ -0.2
NECAB3-222	ENST00000607805	DAZ3	Q9NR90	486 aa	Known RBP	13.82	□□□□□ -0.2
NECAB3-222	ENST00000607805		Q9UF83	564 aa		13.82	□□□□□ -0.2
NECAB3-222	ENST00000607805	PSG8	Q9UQ74	426 aa		13.82	□□□□□ -0.2
NECAB3-222	ENST00000607805	STAG3L2	P0CL84	134 aa		13.81	□□□□□ -0.2
NECAB3-222	ENST00000607805	STAG3L3	P0CL85	134 aa		13.81	□□□□□ -0.2
NECAB3-222	ENST00000607805	PET100	P0DJ07	73 aa		13.81	□□□□□ -0.2
NECAB3-222	ENST00000607805	ARL14EPL	P0DKL9	152 aa		13.81	□□□□□ -0.2
NECAB3-222	ENST00000607805	PIK3CD-AS1	Q5SR53	167 aa		13.81	□□□□□ -0.2
NECAB3-222	ENST00000607805	UFSP1	Q6NVU6	142 aa		13.81	□□□□□ -0.2
NECAB3-222	ENST00000607805	OR10G9	Q8NGN4	311 aa		13.81	□□□□□ -0.2
NECAB3-222	ENST00000607805	OR10G7	Q8NGN6	311 aa		13.81	□□□□□ -0.2
NECAB3-222	ENST00000607805	MARVELD1	Q9BSK0	173 aa		13.81	□□□□□ -0.2
NECAB3-222	ENST00000607805	PARL	Q9H300	379 aa		13.81	□□□□□ -0.2
NECAB3-222	ENST00000607805	SCX	Q7RTU7	201 aa		13.8	□□□□□ -0.2
NECAB3-222	ENST00000607805	LINC00479	Q96M42	142 aa		13.8	□□□□□ -0.2
NECAB3-222	ENST00000607805	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	13.79	□□□□□ -0.2
NECAB3-222	ENST00000607805	LINC01620	Q4KN68	170 aa		13.79	□□□□□ -0.2
NECAB3-222	ENST00000607805	SMUG1	Q53HV7	270 aa		13.79	□□□□□ -0.2
NECAB3-222	ENST00000607805	BAALC	Q8WXS3	180 aa		13.79	□□□□□ -0.2
NECAB3-222	ENST00000607805	SH3BGRL3	Q9H299	93 aa		13.79	□□□□□ -0.2
NECAB3-222	ENST00000607805	BATF3	Q9NR55	127 aa		13.79	□□□□□ -0.2
NECAB3-222	ENST00000607805	GAGE12J	A6NER3	117 aa		13.78	□□□□□ -0.2
NECAB3-222	ENST00000607805	FLI1	Q01543	452 aa	Predicted RBP	13.78	□□□□□ -0.2
NECAB3-222	ENST00000607805	GAGE1	Q13065	139 aa		13.78	□□□□□ -0.2
NECAB3-222	ENST00000607805	GAGE4	Q13068	117 aa		13.78	□□□□□ -0.2
NECAB3-222	ENST00000607805	GAGE5	Q13069	117 aa		13.78	□□□□□ -0.2
NECAB3-222	ENST00000607805	GAGE13	Q4V321	117 aa		13.78	□□□□□ -0.2
NECAB3-222	ENST00000607805	TOR2A	Q5JU69	321 aa		13.78	□□□□□ -0.2
NECAB3-222	ENST00000607805	OR2G3	Q8NGZ4	309 aa		13.78	□□□□□ -0.2
NECAB3-222	ENST00000607805	IGKV3D-20	A0A0C4DH25	116 aa		13.77	□□□□□ -0.21
NECAB3-222	ENST00000607805	RNF222	A6NCQ9	220 aa		13.77	□□□□□ -0.21
NECAB3-222	ENST00000607805		A8MWV9	139 aa		13.77	□□□□□ -0.21
NECAB3-222	ENST00000607805	CDC34	P49427	236 aa	Predicted RBP	13.77	□□□□□ -0.21
NECAB3-222	ENST00000607805	CYB561D1	Q8N8Q1	229 aa		13.77	□□□□□ -0.21
NECAB3-222	ENST00000607805	COX11	Q9Y6N1	276 aa		13.77	□□□□□ -0.21
NECAB3-222	ENST00000607805	GGTLC3	B5MD39	225 aa		13.76	□□□□□ -0.21
NECAB3-222	ENST00000607805	GCHFR	P30047	84 aa		13.76	□□□□□ -0.21
NECAB3-222	ENST00000607805	DNAJC30	Q96LL9	226 aa		13.76	□□□□□ -0.21
NECAB3-222	ENST00000607805	CHAC1	Q9BUX1	264 aa		13.76	□□□□□ -0.21
NECAB3-222	ENST00000607805	SAMD10	Q9BYL1	202 aa		13.76	□□□□□ -0.21
NECAB3-222	ENST00000607805	JPT2	Q9H910	190 aa		13.76	□□□□□ -0.21
NECAB3-222	ENST00000607805	EPDR1	Q9UM22	224 aa		13.76	□□□□□ -0.21
NECAB3-222	ENST00000607805		A0A087WWC5	75 aa		13.75	□□□□□ -0.21
NECAB3-222	ENST00000607805		K7EQM0	130 aa		13.75	□□□□□ -0.21
NECAB3-222	ENST00000607805	SUMO1	P63165	101 aa	Known RBP	13.75	□□□□□ -0.21
NECAB3-222	ENST00000607805	SERTAD4-AS1	Q5TG53	156 aa		13.75	□□□□□ -0.21
NECAB3-222	ENST00000607805	PRNT	Q86SH4	94 aa		13.75	□□□□□ -0.21
NECAB3-222	ENST00000607805	C14orf178	Q8N769	122 aa	Predicted RBP	13.75	□□□□□ -0.21
NECAB3-222	ENST00000607805	RAB24	Q969Q5	203 aa		13.75	□□□□□ -0.21
NECAB3-222	ENST00000607805	ZFP69	Q49AA0	526 aa		13.74	□□□□□ -0.21
NECAB3-222	ENST00000607805	NIT1	Q86X76	327 aa		13.74	□□□□□ -0.21
NECAB3-222	ENST00000607805		Q8N976	141 aa		13.74	□□□□□ -0.21
NECAB3-222	ENST00000607805	OR2T35	Q8NGX2	323 aa		13.74	□□□□□ -0.21
NECAB3-222	ENST00000607805	SSNA1	O43805	119 aa		13.73	□□□□□ -0.21
NECAB3-222	ENST00000607805	DEFA1	P59665	94 aa		13.73	□□□□□ -0.21
NECAB3-222	ENST00000607805	DEFA3	P59666	94 aa		13.73	□□□□□ -0.21
NECAB3-222	ENST00000607805	SAPCD1	Q5SSQ6	148 aa		13.73	□□□□□ -0.21
NECAB3-222	ENST00000607805	CIRBP-AS1	Q8TBR5	109 aa		13.73	□□□□□ -0.21
NECAB3-222	ENST00000607805	IL36B	Q9NZH7	164 aa		13.73	□□□□□ -0.21
NECAB3-222	ENST00000607805	OXT	P01178	125 aa		13.72	□□□□□ -0.21
NECAB3-222	ENST00000607805	FGF8	P55075	233 aa	Predicted RBP	13.72	□□□□□ -0.21
NECAB3-222	ENST00000607805	LGALSL	Q3ZCW2	172 aa	Predicted RBP	13.72	□□□□□ -0.21
NECAB3-222	ENST00000607805	PSMG3	Q9BT73	122 aa	Predicted RBP	13.72	□□□□□ -0.21
NECAB3-222	ENST00000607805	RBFOX3	A6NFN3	312 aa		13.71	□□□□□ -0.21
NECAB3-222	ENST00000607805	DNLZ	Q5SXM8	178 aa		13.71	□□□□□ -0.21
NECAB3-222	ENST00000607805	DMRTA1	Q5VZB9	504 aa		13.71	□□□□□ -0.21
NECAB3-222	ENST00000607805	ATRAID	Q6UW56	229 aa		13.71	□□□□□ -0.21
NECAB3-222	ENST00000607805	RMI2	Q96E14	147 aa		13.71	□□□□□ -0.21
NECAB3-222	ENST00000607805	TMEM167B	Q9NRX6	74 aa		13.71	□□□□□ -0.21
NECAB3-222	ENST00000607805	HSD17B11	Q8NBQ5	300 aa		13.7	□□□□□ -0.22
NECAB3-222	ENST00000607805	IGKV2D-24	A0A075B6R9	120 aa		13.69	□□□□□ -0.22
NECAB3-222	ENST00000607805	FABP5P3	A8MUU1	101 aa		13.69	□□□□□ -0.22
NECAB3-222	ENST00000607805	S100A4	P26447	101 aa	Known RBP	13.69	□□□□□ -0.22
NECAB3-222	ENST00000607805	ATP6V0C	P27449	155 aa		13.69	□□□□□ -0.22
NECAB3-222	ENST00000607805	ASIP	P42127	132 aa		13.69	□□□□□ -0.22
NECAB3-222	ENST00000607805	KLK12	Q9UKR0	248 aa		13.69	□□□□□ -0.22
NECAB3-222	ENST00000607805	ARL2-SNX15	V9GYD0	113 aa		13.69	□□□□□ -0.22
NECAB3-222	ENST00000607805	TRAV34	A0A0B4J273	112 aa		13.68	□□□□□ -0.22
NECAB3-222	ENST00000607805		A0A1W2PRE2	83 aa		13.68	□□□□□ -0.22
NECAB3-222	ENST00000607805	CXorf1	O96002	111 aa		13.68	□□□□□ -0.22
NECAB3-222	ENST00000607805	SERF2	P84101	59 aa		13.68	□□□□□ -0.22
NECAB3-222	ENST00000607805	CHCHD7	Q9BUK0	85 aa		13.68	□□□□□ -0.22
NECAB3-222	ENST00000607805	RHOD	O00212	210 aa		13.67	□□□□□ -0.22
NECAB3-222	ENST00000607805	IGLV2-8	P01709	118 aa		13.67	□□□□□ -0.22
NECAB3-222	ENST00000607805	MB	P02144	154 aa		13.67	□□□□□ -0.22
NECAB3-222	ENST00000607805	SEC11B	P0C7V7	166 aa		13.67	□□□□□ -0.22
NECAB3-222	ENST00000607805	CRIP1	P50238	77 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms