RNA–Protein interactions for RNA: ENST00000606676.1

SHROOM1-207, Transcript of shroom family member 1, humanhuman

Gene SHROOM1, Length 351 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-207ENST00000606676 B4DEV8 164 aa8.82□□□□□ -1
SHROOM1-207ENST00000606676 M0R036 132 aa8.82□□□□□ -1
SHROOM1-207ENST00000606676 RS1O15537 224 aa8.82□□□□□ -1
SHROOM1-207ENST00000606676 ZNF506Q5JVG8 444 aa8.82□□□□□ -1
SHROOM1-207ENST00000606676 DNLZQ5SXM8 178 aa8.82□□□□□ -1
SHROOM1-207ENST00000606676 CFAP126Q5VTH2 177 aa8.82□□□□□ -1
SHROOM1-207ENST00000606676 BAGE2Q86Y30 109 aa8.82□□□□□ -1
SHROOM1-207ENST00000606676 C11orf52Q96A22 123 aa8.82□□□□□ -1
SHROOM1-207ENST00000606676 UPK3BQ9BT76 320 aa8.82□□□□□ -1
SHROOM1-207ENST00000606676 Q9H8V8 135 aa8.82□□□□□ -1
SHROOM1-207ENST00000606676 MRPS16Q9Y3D3 137 aaKnown RBP8.82□□□□□ -1
SHROOM1-207ENST00000606676 ICOSQ9Y6W8 199 aa8.82□□□□□ -1
SHROOM1-207ENST00000606676 NBDYA0A0U1RRE5 68 aa8.81□□□□□ -1
SHROOM1-207ENST00000606676 GRIFINA4D1Z8 144 aa8.81□□□□□ -1
SHROOM1-207ENST00000606676 TEX46H3BTG2 121 aa8.81□□□□□ -1
SHROOM1-207ENST00000606676 K7EQD1 137 aa8.81□□□□□ -1
SHROOM1-207ENST00000606676 GATA1P15976 413 aaPredicted RBP8.81□□□□□ -1
SHROOM1-207ENST00000606676 ASIPP42127 132 aa8.81□□□□□ -1
SHROOM1-207ENST00000606676 RPL35P42766 123 aaKnown RBP8.81□□□□□ -1
SHROOM1-207ENST00000606676 NKX2-5P52952 324 aaPredicted RBP8.81□□□□□ -1
SHROOM1-207ENST00000606676 LINC01559Q495D7 138 aa8.81□□□□□ -1
SHROOM1-207ENST00000606676 DERL1Q9BUN8 251 aa8.81□□□□□ -1
SHROOM1-207ENST00000606676 IL36BQ9NZH7 164 aa8.81□□□□□ -1
SHROOM1-207ENST00000606676 DYNC1H1Q14204 4646 aaKnown RBP8.8□□□□□ -1
SHROOM1-207ENST00000606676 ARMS2P0C7Q2 107 aa8.8□□□□□ -1
SHROOM1-207ENST00000606676 S100A4P26447 101 aaKnown RBP8.8□□□□□ -1
SHROOM1-207ENST00000606676 MRPL23Q16540 153 aaKnown RBP8.8□□□□□ -1
SHROOM1-207ENST00000606676 PIK3CD-AS1Q5SR53 167 aa8.8□□□□□ -1
SHROOM1-207ENST00000606676 ALKAL2Q6UX46 152 aa8.8□□□□□ -1
SHROOM1-207ENST00000606676 TXNDC17Q9BRA2 123 aa8.8□□□□□ -1
SHROOM1-207ENST00000606676 BOLA1Q9Y3E2 137 aa8.8□□□□□ -1
SHROOM1-207ENST00000606676 TMSB15BA0A087X1C1 80 aa8.79□□□□□ -1
SHROOM1-207ENST00000606676 LOC100131303A0A0U1RQF7 123 aa8.79□□□□□ -1
SHROOM1-207ENST00000606676 H3BVH4 76 aa8.79□□□□□ -1
SHROOM1-207ENST00000606676 GYPEP15421 78 aa8.79□□□□□ -1
SHROOM1-207ENST00000606676 MEF2BQ02080 365 aaPredicted RBP8.79□□□□□ -1
SHROOM1-207ENST00000606676 LYPD5Q6UWN5 251 aa8.79□□□□□ -1
SHROOM1-207ENST00000606676 LINC00336Q6ZUF6 198 aa8.79□□□□□ -1
SHROOM1-207ENST00000606676 SLC25A29Q8N8R3 303 aa8.79□□□□□ -1
SHROOM1-207ENST00000606676 KRTAP1-5Q9BYS1 174 aa8.79□□□□□ -1
SHROOM1-207ENST00000606676 SCRT2Q9NQ03 307 aa8.79□□□□□ -1
SHROOM1-207ENST00000606676 IGHV3-73A0A0B4J1V6 119 aa8.78□□□□□ -1
SHROOM1-207ENST00000606676 CIDEAO60543 219 aa8.78□□□□□ -1
SHROOM1-207ENST00000606676 BCL2P10415 239 aa8.78□□□□□ -1
SHROOM1-207ENST00000606676 RPL19P84098 196 aaKnown RBP8.78□□□□□ -1
SHROOM1-207ENST00000606676 C1orf134Q5TEV5 83 aa8.78□□□□□ -1
SHROOM1-207ENST00000606676 DMRTA1Q5VZB9 504 aa8.78□□□□□ -1
SHROOM1-207ENST00000606676 UFSP1Q6NVU6 142 aa8.78□□□□□ -1
SHROOM1-207ENST00000606676 NEGR1Q7Z3B1 354 aa8.78□□□□□ -1
SHROOM1-207ENST00000606676 JPT2Q9H910 190 aa8.78□□□□□ -1
SHROOM1-207ENST00000606676 A0A1B0GVY2 172 aa8.77□□□□□ -1.01
SHROOM1-207ENST00000606676 TRBV6-4A0A1B0GX49 114 aa8.77□□□□□ -1.01
SHROOM1-207ENST00000606676 RAB19A4D1S5 217 aa8.77□□□□□ -1.01
SHROOM1-207ENST00000606676 A8MWV9 139 aa8.77□□□□□ -1.01
SHROOM1-207ENST00000606676 PDE6DO43924 150 aa8.77□□□□□ -1.01
SHROOM1-207ENST00000606676 IFNA1P01562 189 aa8.77□□□□□ -1.01
SHROOM1-207ENST00000606676 IGLV2-8P01709 118 aa8.77□□□□□ -1.01
SHROOM1-207ENST00000606676 SRIP30626 198 aa8.77□□□□□ -1.01
SHROOM1-207ENST00000606676 ZFP2Q6ZN57 461 aa8.77□□□□□ -1.01
SHROOM1-207ENST00000606676 Q6ZSN1 163 aa8.77□□□□□ -1.01
SHROOM1-207ENST00000606676 LYPD6BQ8NI32 183 aa8.77□□□□□ -1.01
SHROOM1-207ENST00000606676 SAMD10Q9BYL1 202 aa8.77□□□□□ -1.01
SHROOM1-207ENST00000606676 PARLQ9H300 379 aa8.77□□□□□ -1.01
SHROOM1-207ENST00000606676 VAX2Q9UIW0 290 aa8.77□□□□□ -1.01
SHROOM1-207ENST00000606676 TRBV20OR9-2A0A075B6H5 130 aa8.76□□□□□ -1.01
SHROOM1-207ENST00000606676 PRSS29PA6NIE9 313 aa8.76□□□□□ -1.01
SHROOM1-207ENST00000606676 NXPH4O95158 308 aa8.76□□□□□ -1.01
SHROOM1-207ENST00000606676 CENPWQ5EE01 88 aa8.76□□□□□ -1.01
SHROOM1-207ENST00000606676 PRR27Q6MZM9 219 aa8.76□□□□□ -1.01
SHROOM1-207ENST00000606676 PCNPQ8WW12 178 aaKnown RBP8.76□□□□□ -1.01
SHROOM1-207ENST00000606676 SIVA1O15304 175 aa8.75□□□□□ -1.01
SHROOM1-207ENST00000606676 CXCL1P09341 107 aa8.75□□□□□ -1.01
SHROOM1-207ENST00000606676 MED14OSP0DP75 135 aa8.75□□□□□ -1.01
SHROOM1-207ENST00000606676 TAGLN2P37802 199 aaKnown RBP8.75□□□□□ -1.01
SHROOM1-207ENST00000606676 BLOC1S1P78537 153 aa8.75□□□□□ -1.01
SHROOM1-207ENST00000606676 SSBP4Q9BWG4 385 aaPredicted RBP8.75□□□□□ -1.01
SHROOM1-207ENST00000606676 MED9Q9NWA0 146 aa8.75□□□□□ -1.01
SHROOM1-207ENST00000606676 PHLDA3Q9Y5J5 127 aa8.75□□□□□ -1.01
SHROOM1-207ENST00000606676 A0A1W2PPQ1 181 aa8.74□□□□□ -1.01
SHROOM1-207ENST00000606676 MGST1P10620 155 aaKnown RBP8.74□□□□□ -1.01
SHROOM1-207ENST00000606676 RHOHQ15669 191 aa8.74□□□□□ -1.01
SHROOM1-207ENST00000606676 TTC32Q5I0X7 151 aa8.74□□□□□ -1.01
SHROOM1-207ENST00000606676 SOHLH1Q5JUK2 328 aa8.74□□□□□ -1.01
SHROOM1-207ENST00000606676 C6orf223Q8N319 242 aa8.74□□□□□ -1.01
SHROOM1-207ENST00000606676 SYT8Q8NBV8 401 aa8.74□□□□□ -1.01
SHROOM1-207ENST00000606676 SFRP2Q96HF1 295 aa8.74□□□□□ -1.01
SHROOM1-207ENST00000606676 PRADC1Q9BSG0 188 aa8.74□□□□□ -1.01
SHROOM1-207ENST00000606676 Q9UF83 564 aa8.74□□□□□ -1.01
SHROOM1-207ENST00000606676 M0R381 172 aa8.73□□□□□ -1.01
SHROOM1-207ENST00000606676 SNAI2O43623 268 aa8.73□□□□□ -1.01
SHROOM1-207ENST00000606676 CRYGDP07320 174 aa8.73□□□□□ -1.01
SHROOM1-207ENST00000606676 GNG4P50150 75 aa8.73□□□□□ -1.01
SHROOM1-207ENST00000606676 SH2D6Q7Z4S9 175 aa8.73□□□□□ -1.01
SHROOM1-207ENST00000606676 OR10AG1Q8NH19 301 aa8.73□□□□□ -1.01
SHROOM1-207ENST00000606676 SMIM12Q96EX1 92 aa8.73□□□□□ -1.01
SHROOM1-207ENST00000606676 A0A087WWL8 130 aa8.72□□□□□ -1.01
SHROOM1-207ENST00000606676 C19orf71A6NCJ1 209 aa8.72□□□□□ -1.01
SHROOM1-207ENST00000606676 RBFOX3A6NFN3 312 aa8.72□□□□□ -1.01
SHROOM1-207ENST00000606676 TIRAPP58753 221 aa8.72□□□□□ -1.01
SHROOM1-207ENST00000606676 WFDC10BQ8IUB3 73 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms