RNA–Protein interactions for RNA: ENST00000605358.5

CCDC12-212, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-212ENST00000605358 SMIM3Q9BZL3 60 aa11.77□□□□□ -0.53
CCDC12-212ENST00000605358 C11orf21Q9P2W6 132 aa11.77□□□□□ -0.53
CCDC12-212ENST00000605358 IGHV3-73A0A0B4J1V6 119 aa11.76□□□□□ -0.53
CCDC12-212ENST00000605358 GGTLC3B5MD39 225 aa11.76□□□□□ -0.53
CCDC12-212ENST00000605358 UPK1BO75841 260 aa11.76□□□□□ -0.53
CCDC12-212ENST00000605358 GCGP01275 180 aa11.76□□□□□ -0.53
CCDC12-212ENST00000605358 RNASE3P12724 160 aaKnown RBP11.76□□□□□ -0.53
CCDC12-212ENST00000605358 ZNF80P51504 273 aaPredicted RBP11.76□□□□□ -0.53
CCDC12-212ENST00000605358 FGF8P55075 233 aaPredicted RBP11.76□□□□□ -0.53
CCDC12-212ENST00000605358 LINC00528Q8N1L1 170 aa11.76□□□□□ -0.53
CCDC12-212ENST00000605358 RMI2Q96E14 147 aa11.76□□□□□ -0.53
CCDC12-212ENST00000605358 PSG8Q9UQ74 426 aa11.76□□□□□ -0.53
CCDC12-212ENST00000605358 STAG3L2P0CL84 134 aa11.75□□□□□ -0.53
CCDC12-212ENST00000605358 STAG3L3P0CL85 134 aa11.75□□□□□ -0.53
CCDC12-212ENST00000605358 ARL14EPLP0DKL9 152 aa11.75□□□□□ -0.53
CCDC12-212ENST00000605358 LINC00694P0DN24 101 aa11.75□□□□□ -0.53
CCDC12-212ENST00000605358 RAB2AP61019 212 aa11.75□□□□□ -0.53
CCDC12-212ENST00000605358 Q8N976 141 aa11.75□□□□□ -0.53
CCDC12-212ENST00000605358 OR2G3Q8NGZ4 309 aa11.75□□□□□ -0.53
CCDC12-212ENST00000605358 SSNA1O43805 119 aa11.74□□□□□ -0.53
CCDC12-212ENST00000605358 CDC34P49427 236 aaPredicted RBP11.74□□□□□ -0.53
CCDC12-212ENST00000605358 FLI1Q01543 452 aaPredicted RBP11.74□□□□□ -0.53
CCDC12-212ENST00000605358 SERTAD4-AS1Q5TG53 156 aa11.74□□□□□ -0.53
CCDC12-212ENST00000605358 CYB561D1Q8N8Q1 229 aa11.74□□□□□ -0.53
CCDC12-212ENST00000605358 TMEM75Q8N9X5 138 aa11.74□□□□□ -0.53
CCDC12-212ENST00000605358 PARLQ9H300 379 aa11.74□□□□□ -0.53
CCDC12-212ENST00000605358 WFDC1Q9HC57 220 aa11.74□□□□□ -0.53
CCDC12-212ENST00000605358 EIF3GO75821 320 aaKnown RBP eCLIP11.73□□□□□ -0.53
CCDC12-212ENST00000605358 IGLV2-11P01706 119 aa11.73□□□□□ -0.53
CCDC12-212ENST00000605358 MBP02144 154 aa11.73□□□□□ -0.53
CCDC12-212ENST00000605358 WFDC2Q14508 124 aa11.73□□□□□ -0.53
CCDC12-212ENST00000605358 SGK494Q96LW2 274 aa11.73□□□□□ -0.53
CCDC12-212ENST00000605358 TMEM167BQ9NRX6 74 aa11.73□□□□□ -0.53
CCDC12-212ENST00000605358 EPDR1Q9UM22 224 aa11.73□□□□□ -0.53
CCDC12-212ENST00000605358 SERF2P84101 59 aa11.72□□□□□ -0.53
CCDC12-212ENST00000605358 LINC00479Q96M42 142 aa11.72□□□□□ -0.53
CCDC12-212ENST00000605358 PSMG3Q9BT73 122 aaPredicted RBP11.72□□□□□ -0.53
CCDC12-212ENST00000605358 HMGB3O15347 200 aaKnown RBP11.71□□□□□ -0.53
CCDC12-212ENST00000605358 S100A4P26447 101 aaKnown RBP11.71□□□□□ -0.53
CCDC12-212ENST00000605358 GCHFRP30047 84 aa11.71□□□□□ -0.53
CCDC12-212ENST00000605358 SUMO1P63165 101 aaKnown RBP11.71□□□□□ -0.53
CCDC12-212ENST00000605358 DAZ4Q86SG3 579 aaKnown RBP11.71□□□□□ -0.53
CCDC12-212ENST00000605358 RAB24Q969Q5 203 aa11.71□□□□□ -0.53
CCDC12-212ENST00000605358 CHCHD7Q9BUK0 85 aa11.71□□□□□ -0.53
CCDC12-212ENST00000605358 DAZ3Q9NR90 486 aaKnown RBP11.71□□□□□ -0.53
CCDC12-212ENST00000605358 IL36BQ9NZH7 164 aa11.71□□□□□ -0.53
CCDC12-212ENST00000605358 URGCP-MRPS24S4R325 110 aa11.71□□□□□ -0.53
CCDC12-212ENST00000605358 RNF222A6NCQ9 220 aa11.7□□□□□ -0.54
CCDC12-212ENST00000605358 GAGE12JA6NER3 117 aa11.7□□□□□ -0.54
CCDC12-212ENST00000605358 FABP5P3A8MUU1 101 aa11.7□□□□□ -0.54
CCDC12-212ENST00000605358 RHODO00212 210 aa11.7□□□□□ -0.54
CCDC12-212ENST00000605358 CXorf1O96002 111 aa11.7□□□□□ -0.54
CCDC12-212ENST00000605358 GAGE1Q13065 139 aa11.7□□□□□ -0.54
CCDC12-212ENST00000605358 GAGE4Q13068 117 aa11.7□□□□□ -0.54
CCDC12-212ENST00000605358 GAGE5Q13069 117 aa11.7□□□□□ -0.54
CCDC12-212ENST00000605358 ELOBQ15370 118 aa11.7□□□□□ -0.54
CCDC12-212ENST00000605358 LGALSLQ3ZCW2 172 aaPredicted RBP11.7□□□□□ -0.54
CCDC12-212ENST00000605358 GAGE13Q4V321 117 aa11.7□□□□□ -0.54
CCDC12-212ENST00000605358 UFSP1Q6NVU6 142 aa11.7□□□□□ -0.54
CCDC12-212ENST00000605358 PRNTQ86SH4 94 aa11.7□□□□□ -0.54
CCDC12-212ENST00000605358 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.69□□□□□ -0.54
CCDC12-212ENST00000605358 RBFOX3A6NFN3 312 aa11.69□□□□□ -0.54
CCDC12-212ENST00000605358 OXTP01178 125 aa11.69□□□□□ -0.54
CCDC12-212ENST00000605358 ASIPP42127 132 aa11.69□□□□□ -0.54
CCDC12-212ENST00000605358 DNLZQ5SXM8 178 aa11.69□□□□□ -0.54
CCDC12-212ENST00000605358 SYT8Q8NBV8 401 aa11.69□□□□□ -0.54
CCDC12-212ENST00000605358 BAALCQ8WXS3 180 aa11.69□□□□□ -0.54
CCDC12-212ENST00000605358 CHAC1Q9BUX1 264 aa11.69□□□□□ -0.54
CCDC12-212ENST00000605358 IGKV3D-20A0A0C4DH25 116 aa11.68□□□□□ -0.54
CCDC12-212ENST00000605358 A0A1W2PRE2 83 aa11.68□□□□□ -0.54
CCDC12-212ENST00000605358 DEFA1P59665 94 aa11.68□□□□□ -0.54
CCDC12-212ENST00000605358 DEFA3P59666 94 aa11.68□□□□□ -0.54
CCDC12-212ENST00000605358 IFITM3Q01628 133 aa11.68□□□□□ -0.54
CCDC12-212ENST00000605358 SCXQ7RTU7 201 aa11.68□□□□□ -0.54
CCDC12-212ENST00000605358 NIT1Q86X76 327 aa11.68□□□□□ -0.54
CCDC12-212ENST00000605358 Q8N3U1 123 aa11.68□□□□□ -0.54
CCDC12-212ENST00000605358 LECT2O14960 151 aa11.67□□□□□ -0.54
CCDC12-212ENST00000605358 OR2T35Q8NGX2 323 aa11.67□□□□□ -0.54
CCDC12-212ENST00000605358 ACTR3CQ9C0K3 210 aaPredicted RBP11.67□□□□□ -0.54
CCDC12-212ENST00000605358 TNFSF18Q9UNG2 199 aa11.67□□□□□ -0.54
CCDC12-212ENST00000605358 Q0VG73 95 aa11.66□□□□□ -0.54
CCDC12-212ENST00000605358 C14orf177Q52M58 125 aa11.66□□□□□ -0.54
CCDC12-212ENST00000605358 ATRAIDQ6UW56 229 aa11.66□□□□□ -0.54
CCDC12-212ENST00000605358 NKX6-2Q9C056 277 aaPredicted RBP11.66□□□□□ -0.54
CCDC12-212ENST00000605358 IGKV2D-24A0A075B6R9 120 aa11.65□□□□□ -0.54
CCDC12-212ENST00000605358 ATP6V0CP27449 155 aa11.65□□□□□ -0.54
CCDC12-212ENST00000605358 KCNIP4Q6PIL6 250 aa11.65□□□□□ -0.54
CCDC12-212ENST00000605358 HSD17B11Q8NBQ5 300 aa11.65□□□□□ -0.54
CCDC12-212ENST00000605358 SAMD10Q9BYL1 202 aa11.65□□□□□ -0.54
CCDC12-212ENST00000605358 A0A087WX48 190 aa11.64□□□□□ -0.55
CCDC12-212ENST00000605358 TRBV10-1A0A0K0K1A3 114 aa11.64□□□□□ -0.55
CCDC12-212ENST00000605358 B4DEV8 164 aa11.64□□□□□ -0.55
CCDC12-212ENST00000605358 IGLV2-8P01709 118 aa11.64□□□□□ -0.55
CCDC12-212ENST00000605358 DMRTA1Q5VZB9 504 aa11.64□□□□□ -0.55
CCDC12-212ENST00000605358 COX8CQ7Z4L0 72 aa11.64□□□□□ -0.55
CCDC12-212ENST00000605358 C14orf178Q8N769 122 aaPredicted RBP11.64□□□□□ -0.55
CCDC12-212ENST00000605358 AQP10Q96PS8 301 aa11.64□□□□□ -0.55
CCDC12-212ENST00000605358 ARL2-SNX15V9GYD0 113 aa11.64□□□□□ -0.55
CCDC12-212ENST00000605358 KRTAP10-4P60372 401 aaPredicted RBP11.63□□□□□ -0.55
CCDC12-212ENST00000605358 OR11H4Q8NGC9 324 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms