RNA–Protein interactions for RNA: ENST00000602565.2

SGMS1-206, Transcript of sphingomyelin synthase 1, humanhuman

Gene SGMS1, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-206ENST00000602565 OR10AG1Q8NH19 301 aa3.41□□□□□ -1.86
SGMS1-206ENST00000602565 HEATR1Q9H583 2144 aaKnown RBP3.41□□□□□ -1.86
SGMS1-206ENST00000602565 COMMD3Q9UBI1 195 aa3.41□□□□□ -1.86
SGMS1-206ENST00000602565 METTL1Q9UBP6 276 aaKnown RBP3.41□□□□□ -1.86
SGMS1-206ENST00000602565 MPC1Q9Y5U8 109 aa3.41□□□□□ -1.86
SGMS1-206ENST00000602565 DAPK1P53355 1430 aa3.4□□□□□ -1.87
SGMS1-206ENST00000602565 QSER1Q2KHR3 1735 aa3.4□□□□□ -1.87
SGMS1-206ENST00000602565 ALS2Q96Q42 1657 aa3.4□□□□□ -1.87
SGMS1-206ENST00000602565 BAHCC1Q9P281 2608 aa3.4□□□□□ -1.87
SGMS1-206ENST00000602565 LRRC37A3O60309 1634 aa3.4□□□□□ -1.87
SGMS1-206ENST00000602565 C3orf85A0A1B0GTC6 90 aa3.4□□□□□ -1.87
SGMS1-206ENST00000602565 KRTAP5-8O75690 187 aa3.4□□□□□ -1.87
SGMS1-206ENST00000602565 COPZ1P61923 177 aa3.4□□□□□ -1.87
SGMS1-206ENST00000602565 WHAMMP3Q1A5X7 153 aa3.4□□□□□ -1.87
SGMS1-206ENST00000602565 C10orf111Q8N326 155 aa3.4□□□□□ -1.87
SGMS1-206ENST00000602565 LPAR5Q9H1C0 372 aa3.4□□□□□ -1.87
SGMS1-206ENST00000602565 MED9Q9NWA0 146 aa3.4□□□□□ -1.87
SGMS1-206ENST00000602565 COL1A1P02452 1464 aaPredicted RBP3.39□□□□□ -1.87
SGMS1-206ENST00000602565 CLTCL1P53675 1640 aa3.39□□□□□ -1.87
SGMS1-206ENST00000602565 COL5A1P20908 1838 aaPredicted RBP3.39□□□□□ -1.87
SGMS1-206ENST00000602565 CCL16O15467 120 aa3.39□□□□□ -1.87
SGMS1-206ENST00000602565 YPEL1O60688 119 aa3.39□□□□□ -1.87
SGMS1-206ENST00000602565 MRPS14O60783 128 aaKnown RBP3.39□□□□□ -1.87
SGMS1-206ENST00000602565 SELENOWP63302 87 aa3.39□□□□□ -1.87
SGMS1-206ENST00000602565 CASC2Q6XLA1 102 aa3.39□□□□□ -1.87
SGMS1-206ENST00000602565 IDO2Q6ZQW0 420 aa3.39□□□□□ -1.87
SGMS1-206ENST00000602565 KRTAP13-1Q8IUC0 172 aa3.39□□□□□ -1.87
SGMS1-206ENST00000602565 Q8N2B8 174 aa3.39□□□□□ -1.87
SGMS1-206ENST00000602565 PATE1Q8WXA2 126 aa3.39□□□□□ -1.87
SGMS1-206ENST00000602565 DNAJC15Q9Y5T4 150 aa3.39□□□□□ -1.87
SGMS1-206ENST00000602565 IFT172Q9UG01 1749 aa3.39□□□□□ -1.87
SGMS1-206ENST00000602565 CEP192Q8TEP8 1941 aa3.38□□□□□ -1.87
SGMS1-206ENST00000602565 CICQ96RK0 1608 aaPredicted RBP3.38□□□□□ -1.87
SGMS1-206ENST00000602565 RGPD8O14715 1765 aaPredicted RBP3.38□□□□□ -1.87
SGMS1-206ENST00000602565 AKAP12Q02952 1782 aa3.38□□□□□ -1.87
SGMS1-206ENST00000602565 COL5A3P25940 1745 aaPredicted RBP3.38□□□□□ -1.87
SGMS1-206ENST00000602565 F8W1H4 67 aa3.38□□□□□ -1.87
SGMS1-206ENST00000602565 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.38□□□□□ -1.87
SGMS1-206ENST00000602565 FOXI2Q6ZQN5 318 aa3.38□□□□□ -1.87
SGMS1-206ENST00000602565 LINC00052Q96N35 136 aa3.38□□□□□ -1.87
SGMS1-206ENST00000602565 CIB3Q96Q77 187 aaPredicted RBP3.38□□□□□ -1.87
SGMS1-206ENST00000602565 GOLGB1Q14789 3259 aaKnown RBP3.38□□□□□ -1.87
SGMS1-206ENST00000602565 C10orf71Q711Q0 1435 aa3.38□□□□□ -1.87
SGMS1-206ENST00000602565 ANKRD50Q9ULJ7 1429 aa3.38□□□□□ -1.87
SGMS1-206ENST00000602565 PHRF1Q9P1Y6 1649 aaKnown RBP3.37□□□□□ -1.87
SGMS1-206ENST00000602565 RFX7Q2KHR2 1363 aa3.37□□□□□ -1.87
SGMS1-206ENST00000602565 KNDC1Q76NI1 1749 aa3.37□□□□□ -1.87
SGMS1-206ENST00000602565 RBP4P02753 201 aa3.37□□□□□ -1.87
SGMS1-206ENST00000602565 COX7CP15954 63 aa3.37□□□□□ -1.87
SGMS1-206ENST00000602565 MIR22HGQ0VDD5 57 aa3.37□□□□□ -1.87
SGMS1-206ENST00000602565 OTOSQ8NHW6 89 aa3.37□□□□□ -1.87
SGMS1-206ENST00000602565 ZNF625Q96I27 306 aaPredicted RBP3.37□□□□□ -1.87
SGMS1-206ENST00000602565 LAMB4A4D0S4 1761 aa3.37□□□□□ -1.87
SGMS1-206ENST00000602565 LAMB2P55268 1798 aa3.37□□□□□ -1.87
SGMS1-206ENST00000602565 MYH1P12882 1939 aa3.37□□□□□ -1.87
SGMS1-206ENST00000602565 NHSQ6T4R5 1651 aa3.36□□□□□ -1.87
SGMS1-206ENST00000602565 LMO7Q8WWI1 1683 aa3.36□□□□□ -1.87
SGMS1-206ENST00000602565 PVALEFA0A1B0GWK0 134 aa3.36□□□□□ -1.87
SGMS1-206ENST00000602565 IFITM5A6NNB3 132 aa3.36□□□□□ -1.87
SGMS1-206ENST00000602565 CD14P08571 375 aa3.36□□□□□ -1.87
SGMS1-206ENST00000602565 DNAJB13P59910 316 aa3.36□□□□□ -1.87
SGMS1-206ENST00000602565 CCSMST1Q4G0I0 132 aa3.36□□□□□ -1.87
SGMS1-206ENST00000602565 FAM19A2Q8N3H0 131 aa3.36□□□□□ -1.87
SGMS1-206ENST00000602565 SMIM7Q9BQ49 75 aa3.36□□□□□ -1.87
SGMS1-206ENST00000602565 NAA38Q9BRA0 125 aaKnown RBP3.36□□□□□ -1.87
SGMS1-206ENST00000602565 SLC35B3Q9H1N7 401 aa3.36□□□□□ -1.87
SGMS1-206ENST00000602565 SNURFQ9Y675 71 aa3.36□□□□□ -1.87
SGMS1-206ENST00000602565 ANKARQ7Z5J8 1434 aa3.36□□□□□ -1.87
SGMS1-206ENST00000602565 PLXNA4Q9HCM2 1894 aa3.36□□□□□ -1.87
SGMS1-206ENST00000602565 TNRC6CQ9HCJ0 1690 aaKnown RBP3.35□□□□□ -1.87
SGMS1-206ENST00000602565 WNK3Q9BYP7 1800 aa3.35□□□□□ -1.87
SGMS1-206ENST00000602565 IGHV1-24A0A0C4DH33 117 aa3.35□□□□□ -1.87
SGMS1-206ENST00000602565 LOC107984156A0A0G2JMH3 177 aa3.35□□□□□ -1.87
SGMS1-206ENST00000602565 NPFFO15130 113 aa3.35□□□□□ -1.87
SGMS1-206ENST00000602565 CD3DP04234 171 aa3.35□□□□□ -1.87
SGMS1-206ENST00000602565 ARL17AQ8IVW1 177 aa3.35□□□□□ -1.87
SGMS1-206ENST00000602565 ARL11Q969Q4 196 aa3.35□□□□□ -1.87
SGMS1-206ENST00000602565 KCPQ6ZWJ8 1503 aa3.35□□□□□ -1.87
SGMS1-206ENST00000602565 MUC4Q99102 2169 aa3.35□□□□□ -1.87
SGMS1-206ENST00000602565 PCNTO95613 3336 aa3.34□□□□□ -1.87
SGMS1-206ENST00000602565 PCOTHQ58A44 107 aa3.34□□□□□ -1.87
SGMS1-206ENST00000602565 CLLU1Q5K131 121 aa3.34□□□□□ -1.87
SGMS1-206ENST00000602565 FAIMQ9NVQ4 179 aa3.34□□□□□ -1.87
SGMS1-206ENST00000602565 PKD1L3Q7Z443 1732 aa3.34□□□□□ -1.88
SGMS1-206ENST00000602565 BTAF1O14981 1849 aa3.33□□□□□ -1.88
SGMS1-206ENST00000602565 INTS1Q8N201 2190 aaKnown RBP3.33□□□□□ -1.88
SGMS1-206ENST00000602565 PPLO60437 1756 aa3.33□□□□□ -1.88
SGMS1-206ENST00000602565 EDF1O60869 148 aaKnown RBP3.33□□□□□ -1.88
SGMS1-206ENST00000602565 CDC42SE1Q9NRR8 79 aa3.33□□□□□ -1.88
SGMS1-206ENST00000602565 MYOFQ9NZM1 2061 aa3.32□□□□□ -1.88
SGMS1-206ENST00000602565 H3BRM9 83 aa3.32□□□□□ -1.88
SGMS1-206ENST00000602565 APOC1P02654 83 aa3.32□□□□□ -1.88
SGMS1-206ENST00000602565 PLGLB1Q02325 96 aa3.32□□□□□ -1.88
SGMS1-206ENST00000602565 ATOH7Q8N100 152 aa3.32□□□□□ -1.88
SGMS1-206ENST00000602565 SAR1AQ9NR31 198 aa3.32□□□□□ -1.88
SGMS1-206ENST00000602565 ARFGEF3Q5TH69 2177 aa3.32□□□□□ -1.88
SGMS1-206ENST00000602565 VPS8Q8N3P4 1428 aa3.31□□□□□ -1.88
SGMS1-206ENST00000602565 FAM236AA0A1B0GUQ0 79 aa3.31□□□□□ -1.88
SGMS1-206ENST00000602565 FAM236BA0A1B0GV22 79 aa3.31□□□□□ -1.88
SGMS1-206ENST00000602565 TRBV6-4A0A1B0GX49 114 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms