RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 GGTLC3B5MD39 225 aa11.95□□□□□ -0.5
CHMP2A-208ENST00000601220 FAM229AH3BQW9 127 aa11.95□□□□□ -0.5
CHMP2A-208ENST00000601220 LINC00694P0DN24 101 aa11.95□□□□□ -0.5
CHMP2A-208ENST00000601220 WFDC2Q14508 124 aa11.95□□□□□ -0.5
CHMP2A-208ENST00000601220 Q8N3U1 123 aa11.95□□□□□ -0.5
CHMP2A-208ENST00000601220 EPDR1Q9UM22 224 aa11.95□□□□□ -0.5
CHMP2A-208ENST00000601220 MGST1P10620 155 aaKnown RBP11.94□□□□□ -0.5
CHMP2A-208ENST00000601220 SUMO1P63165 101 aaKnown RBP11.94□□□□□ -0.5
CHMP2A-208ENST00000601220 FLI1Q01543 452 aaPredicted RBP11.94□□□□□ -0.5
CHMP2A-208ENST00000601220 LAGE3Q14657 143 aa11.94□□□□□ -0.5
CHMP2A-208ENST00000601220 HSD17B11Q8NBQ5 300 aa11.94□□□□□ -0.5
CHMP2A-208ENST00000601220 ATP6V0E2Q8NHE4 81 aa11.94□□□□□ -0.5
CHMP2A-208ENST00000601220 PSMG3Q9BT73 122 aaPredicted RBP11.94□□□□□ -0.5
CHMP2A-208ENST00000601220 IGKV3D-20A0A0C4DH25 116 aa11.93□□□□□ -0.5
CHMP2A-208ENST00000601220 C1QBP02746 253 aa11.93□□□□□ -0.5
CHMP2A-208ENST00000601220 SMUG1Q53HV7 270 aa11.93□□□□□ -0.5
CHMP2A-208ENST00000601220 UFSP1Q6NVU6 142 aa11.93□□□□□ -0.5
CHMP2A-208ENST00000601220 Q9UF83 564 aa11.93□□□□□ -0.5
CHMP2A-208ENST00000601220 ATP6V0CP27449 155 aa11.92□□□□□ -0.5
CHMP2A-208ENST00000601220 DEFA1P59665 94 aa11.92□□□□□ -0.5
CHMP2A-208ENST00000601220 DEFA3P59666 94 aa11.92□□□□□ -0.5
CHMP2A-208ENST00000601220 PRNTQ86SH4 94 aa11.92□□□□□ -0.5
CHMP2A-208ENST00000601220 LINC00479Q96M42 142 aa11.92□□□□□ -0.5
CHMP2A-208ENST00000601220 PARLQ9H300 379 aa11.92□□□□□ -0.5
CHMP2A-208ENST00000601220 K7EQM0 130 aa11.91□□□□□ -0.5
CHMP2A-208ENST00000601220 ZFP2Q6ZN57 461 aa11.91□□□□□ -0.5
CHMP2A-208ENST00000601220 Q6ZSA8 131 aa11.91□□□□□ -0.5
CHMP2A-208ENST00000601220 CYB561D1Q8N8Q1 229 aa11.91□□□□□ -0.5
CHMP2A-208ENST00000601220 AQP10Q96PS8 301 aa11.91□□□□□ -0.5
CHMP2A-208ENST00000601220 SERF2P84101 59 aa11.9□□□□□ -0.5
CHMP2A-208ENST00000601220 PIK3CD-AS1Q5SR53 167 aa11.9□□□□□ -0.5
CHMP2A-208ENST00000601220 SAPCD1Q5SSQ6 148 aa11.9□□□□□ -0.5
CHMP2A-208ENST00000601220 TM2D2Q9BX73 214 aa11.9□□□□□ -0.5
CHMP2A-208ENST00000601220 SH3BGRL3Q9H299 93 aa11.9□□□□□ -0.5
CHMP2A-208ENST00000601220 TMEM167BQ9NRX6 74 aa11.9□□□□□ -0.5
CHMP2A-208ENST00000601220 ALG5Q9Y673 324 aa11.9□□□□□ -0.5
CHMP2A-208ENST00000601220 CXorf1O96002 111 aa11.89□□□□□ -0.51
CHMP2A-208ENST00000601220 MBP02144 154 aa11.89□□□□□ -0.51
CHMP2A-208ENST00000601220 Q5BKY6 102 aa11.89□□□□□ -0.51
CHMP2A-208ENST00000601220 JPT2Q9H910 190 aa11.89□□□□□ -0.51
CHMP2A-208ENST00000601220 TNFSF18Q9UNG2 199 aa11.89□□□□□ -0.51
CHMP2A-208ENST00000601220 TRAV34A0A0B4J273 112 aa11.88□□□□□ -0.51
CHMP2A-208ENST00000601220 A0A1W2PRE2 83 aa11.88□□□□□ -0.51
CHMP2A-208ENST00000601220 GAGE12JA6NER3 117 aa11.88□□□□□ -0.51
CHMP2A-208ENST00000601220 A8MWV9 139 aa11.88□□□□□ -0.51
CHMP2A-208ENST00000601220 GAGE1Q13065 139 aa11.88□□□□□ -0.51
CHMP2A-208ENST00000601220 GAGE4Q13068 117 aa11.88□□□□□ -0.51
CHMP2A-208ENST00000601220 GAGE5Q13069 117 aa11.88□□□□□ -0.51
CHMP2A-208ENST00000601220 ZFP69Q49AA0 526 aa11.88□□□□□ -0.51
CHMP2A-208ENST00000601220 GAGE13Q4V321 117 aa11.88□□□□□ -0.51
CHMP2A-208ENST00000601220 DAZ4Q86SG3 579 aaKnown RBP11.88□□□□□ -0.51
CHMP2A-208ENST00000601220 SAMD10Q9BYL1 202 aa11.88□□□□□ -0.51
CHMP2A-208ENST00000601220 ACTR3CQ9C0K3 210 aaPredicted RBP11.88□□□□□ -0.51
CHMP2A-208ENST00000601220 DAZ3Q9NR90 486 aaKnown RBP11.88□□□□□ -0.51
CHMP2A-208ENST00000601220 ZNF726P1Q15940 193 aa11.87□□□□□ -0.51
CHMP2A-208ENST00000601220 C14orf178Q8N769 122 aaPredicted RBP11.87□□□□□ -0.51
CHMP2A-208ENST00000601220 OR2T35Q8NGX2 323 aa11.87□□□□□ -0.51
CHMP2A-208ENST00000601220 ARL2-SNX15V9GYD0 113 aa11.87□□□□□ -0.51
CHMP2A-208ENST00000601220 TRAV8-3A0A0A6YYJ7 113 aa11.86□□□□□ -0.51
CHMP2A-208ENST00000601220 FABP5P3A8MUU1 101 aa11.86□□□□□ -0.51
CHMP2A-208ENST00000601220 CRIP1P50238 77 aa11.86□□□□□ -0.51
CHMP2A-208ENST00000601220 LGALSLQ3ZCW2 172 aaPredicted RBP11.86□□□□□ -0.51
CHMP2A-208ENST00000601220 DMRTA1Q5VZB9 504 aa11.86□□□□□ -0.51
CHMP2A-208ENST00000601220 IL36BQ9NZH7 164 aa11.86□□□□□ -0.51
CHMP2A-208ENST00000601220 LECT2O14960 151 aa11.85□□□□□ -0.51
CHMP2A-208ENST00000601220 DNLZQ5SXM8 178 aa11.85□□□□□ -0.51
CHMP2A-208ENST00000601220 S100A4P26447 101 aaKnown RBP11.84□□□□□ -0.51
CHMP2A-208ENST00000601220 ASIPP42127 132 aa11.84□□□□□ -0.51
CHMP2A-208ENST00000601220 COX8CQ7Z4L0 72 aa11.84□□□□□ -0.51
CHMP2A-208ENST00000601220 DNAJC30Q96LL9 226 aa11.84□□□□□ -0.51
CHMP2A-208ENST00000601220 A0A087WWC5 75 aa11.83□□□□□ -0.52
CHMP2A-208ENST00000601220 KRBOX1C9JBD0 128 aa11.83□□□□□ -0.52
CHMP2A-208ENST00000601220 FGF8P55075 233 aaPredicted RBP11.83□□□□□ -0.52
CHMP2A-208ENST00000601220 RPL7L1Q6DKI1 246 aaKnown RBP11.83□□□□□ -0.52
CHMP2A-208ENST00000601220 BAALCQ8WXS3 180 aa11.83□□□□□ -0.52
CHMP2A-208ENST00000601220 RNF222A6NCQ9 220 aa11.82□□□□□ -0.52
CHMP2A-208ENST00000601220 TOR2AQ5JU69 321 aa11.82□□□□□ -0.52
CHMP2A-208ENST00000601220 Q86TA4 180 aa11.82□□□□□ -0.52
CHMP2A-208ENST00000601220 NIT1Q86X76 327 aa11.82□□□□□ -0.52
CHMP2A-208ENST00000601220 ZC2HC1AQ96GY0 325 aa11.82□□□□□ -0.52
CHMP2A-208ENST00000601220 FAM74A7A6NL05 159 aa11.81□□□□□ -0.52
CHMP2A-208ENST00000601220 B4DEV8 164 aa11.81□□□□□ -0.52
CHMP2A-208ENST00000601220 H3BVH4 76 aa11.81□□□□□ -0.52
CHMP2A-208ENST00000601220 PEX7O00628 323 aa11.81□□□□□ -0.52
CHMP2A-208ENST00000601220 ARMS2P0C7Q2 107 aa11.81□□□□□ -0.52
CHMP2A-208ENST00000601220 LINC01620Q4KN68 170 aa11.81□□□□□ -0.52
CHMP2A-208ENST00000601220 LINC00528Q8N1L1 170 aa11.81□□□□□ -0.52
CHMP2A-208ENST00000601220 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.8□□□□□ -0.52
CHMP2A-208ENST00000601220 CTXND1A0A1B0GTU2 59 aa11.8□□□□□ -0.52
CHMP2A-208ENST00000601220 KRTAP29-1A8MX34 341 aaPredicted RBP11.8□□□□□ -0.52
CHMP2A-208ENST00000601220 IFNA7P01567 189 aa11.8□□□□□ -0.52
CHMP2A-208ENST00000601220 PLA2G1BP04054 148 aaKnown RBP11.8□□□□□ -0.52
CHMP2A-208ENST00000601220 UBE2G2P60604 165 aa11.8□□□□□ -0.52
CHMP2A-208ENST00000601220 HIST1H2BAQ96A08 127 aa11.8□□□□□ -0.52
CHMP2A-208ENST00000601220 SFRP2Q96HF1 295 aa11.8□□□□□ -0.52
CHMP2A-208ENST00000601220 MED28Q9H204 178 aa11.8□□□□□ -0.52
CHMP2A-208ENST00000601220 COX11Q9Y6N1 276 aa11.8□□□□□ -0.52
CHMP2A-208ENST00000601220 LRP1Q07954 4544 aaKnown RBP11.79□□□□□ -0.52
CHMP2A-208ENST00000601220 GRIFINA4D1Z8 144 aa11.79□□□□□ -0.52
CHMP2A-208ENST00000601220 J3QL48 77 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 302.5 ms