RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 HHLA3Q9XRX5 114 aa10.86□□□□□ -0.67
RPS28-203ENST00000600659 B4DEV8 164 aa10.85□□□□□ -0.67
RPS28-203ENST00000600659 C9JCJ5 164 aa10.85□□□□□ -0.67
RPS28-203ENST00000600659 M0R036 132 aa10.85□□□□□ -0.67
RPS28-203ENST00000600659 RTL8CO15255 209 aa10.85□□□□□ -0.67
RPS28-203ENST00000600659 CFAP126Q5VTH2 177 aa10.85□□□□□ -0.67
RPS28-203ENST00000600659 UPK3BQ9BT76 320 aa10.85□□□□□ -0.67
RPS28-203ENST00000600659 IL36BQ9NZH7 164 aa10.85□□□□□ -0.67
RPS28-203ENST00000600659 PKHD1P08F94 4074 aa10.84□□□□□ -0.67
RPS28-203ENST00000600659 TRGV4A0A0C4DH28 118 aa10.84□□□□□ -0.67
RPS28-203ENST00000600659 IGLV2-8P01709 118 aa10.84□□□□□ -0.67
RPS28-203ENST00000600659 ORM1P02763 201 aa10.84□□□□□ -0.67
RPS28-203ENST00000600659 S100A9P06702 114 aaKnown RBP10.84□□□□□ -0.67
RPS28-203ENST00000600659 BCL2P10415 239 aa10.84□□□□□ -0.67
RPS28-203ENST00000600659 GATA1P15976 413 aaPredicted RBP10.84□□□□□ -0.67
RPS28-203ENST00000600659 RPL35P42766 123 aaKnown RBP10.84□□□□□ -0.67
RPS28-203ENST00000600659 SLAQ13239 276 aa10.84□□□□□ -0.67
RPS28-203ENST00000600659 OR4C5Q8NGB2 326 aa10.84□□□□□ -0.67
RPS28-203ENST00000600659 TXNDC17Q9BRA2 123 aa10.84□□□□□ -0.67
RPS28-203ENST00000600659 SCRT2Q9NQ03 307 aa10.84□□□□□ -0.67
RPS28-203ENST00000600659 MRPS16Q9Y3D3 137 aaKnown RBP10.84□□□□□ -0.67
RPS28-203ENST00000600659 ICOSQ9Y6W8 199 aa10.84□□□□□ -0.67
RPS28-203ENST00000600659 TEX46H3BTG2 121 aa10.84□□□□□ -0.67
RPS28-203ENST00000600659 H3BVH4 76 aa10.84□□□□□ -0.67
RPS28-203ENST00000600659 K7EQD1 137 aa10.84□□□□□ -0.67
RPS28-203ENST00000600659 ASIPP42127 132 aa10.84□□□□□ -0.67
RPS28-203ENST00000600659 MEF2BQ02080 365 aaPredicted RBP10.84□□□□□ -0.67
RPS28-203ENST00000600659 BAGE2Q86Y30 109 aa10.84□□□□□ -0.67
RPS28-203ENST00000600659 LYPD6BQ8NI32 183 aa10.84□□□□□ -0.67
RPS28-203ENST00000600659 KRTAP1-5Q9BYS1 174 aa10.84□□□□□ -0.67
RPS28-203ENST00000600659 TRBV20OR9-2A0A075B6H5 130 aa10.83□□□□□ -0.68
RPS28-203ENST00000600659 LOC100131303A0A0U1RQF7 123 aa10.83□□□□□ -0.68
RPS28-203ENST00000600659 NBDYA0A0U1RRE5 68 aa10.83□□□□□ -0.68
RPS28-203ENST00000600659 GRIFINA4D1Z8 144 aa10.83□□□□□ -0.68
RPS28-203ENST00000600659 RPL19P84098 196 aaKnown RBP10.83□□□□□ -0.68
RPS28-203ENST00000600659 PIK3CD-AS1Q5SR53 167 aa10.83□□□□□ -0.68
RPS28-203ENST00000600659 UFSP1Q6NVU6 142 aa10.83□□□□□ -0.68
RPS28-203ENST00000600659 TMSB15BA0A087X1C1 80 aa10.82□□□□□ -0.68
RPS28-203ENST00000600659 ARMS2P0C7Q2 107 aa10.82□□□□□ -0.68
RPS28-203ENST00000600659 PARLQ9H300 379 aa10.82□□□□□ -0.68
RPS28-203ENST00000600659 JPT2Q9H910 190 aa10.82□□□□□ -0.68
RPS28-203ENST00000600659 A0A1B0GVY2 172 aa10.81□□□□□ -0.68
RPS28-203ENST00000600659 GYPEP15421 78 aa10.81□□□□□ -0.68
RPS28-203ENST00000600659 S100A4P26447 101 aaKnown RBP10.81□□□□□ -0.68
RPS28-203ENST00000600659 MRPL23Q16540 153 aaKnown RBP10.81□□□□□ -0.68
RPS28-203ENST00000600659 CENPWQ5EE01 88 aa10.81□□□□□ -0.68
RPS28-203ENST00000600659 DMRTA1Q5VZB9 504 aa10.81□□□□□ -0.68
RPS28-203ENST00000600659 SLC25A29Q8N8R3 303 aa10.81□□□□□ -0.68
RPS28-203ENST00000600659 SAMD10Q9BYL1 202 aa10.81□□□□□ -0.68
RPS28-203ENST00000600659 Q9H8V8 135 aa10.81□□□□□ -0.68
RPS28-203ENST00000600659 IGHV3-73A0A0B4J1V6 119 aa10.8□□□□□ -0.68
RPS28-203ENST00000600659 RAB19A4D1S5 217 aa10.8□□□□□ -0.68
RPS28-203ENST00000600659 PDE6DO43924 150 aa10.8□□□□□ -0.68
RPS28-203ENST00000600659 IFNA1P01562 189 aa10.8□□□□□ -0.68
RPS28-203ENST00000600659 CXCL1P09341 107 aa10.8□□□□□ -0.68
RPS28-203ENST00000600659 LYPD5Q6UWN5 251 aa10.8□□□□□ -0.68
RPS28-203ENST00000600659 Q6ZSN1 163 aa10.8□□□□□ -0.68
RPS28-203ENST00000600659 VAX2Q9UIW0 290 aa10.8□□□□□ -0.68
RPS28-203ENST00000600659 NEGR1Q7Z3B1 354 aa10.79□□□□□ -0.68
RPS28-203ENST00000600659 TRBV6-4A0A1B0GX49 114 aa10.78□□□□□ -0.68
RPS28-203ENST00000600659 C19orf71A6NCJ1 209 aa10.78□□□□□ -0.68
RPS28-203ENST00000600659 A8MWV9 139 aa10.78□□□□□ -0.68
RPS28-203ENST00000600659 CIDEAO60543 219 aa10.78□□□□□ -0.68
RPS28-203ENST00000600659 NXPH4O95158 308 aa10.78□□□□□ -0.68
RPS28-203ENST00000600659 MED14OSP0DP75 135 aa10.78□□□□□ -0.68
RPS28-203ENST00000600659 SRIP30626 198 aa10.78□□□□□ -0.68
RPS28-203ENST00000600659 BLOC1S1P78537 153 aa10.78□□□□□ -0.68
RPS28-203ENST00000600659 PRR27Q6MZM9 219 aa10.78□□□□□ -0.68
RPS28-203ENST00000600659 LINC00336Q6ZUF6 198 aa10.78□□□□□ -0.68
RPS28-203ENST00000600659 SNAI2O43623 268 aa10.77□□□□□ -0.69
RPS28-203ENST00000600659 LINC00694P0DN24 101 aa10.77□□□□□ -0.69
RPS28-203ENST00000600659 ZFP2Q6ZN57 461 aa10.77□□□□□ -0.69
RPS28-203ENST00000600659 SMIM12Q96EX1 92 aa10.77□□□□□ -0.69
RPS28-203ENST00000600659 SSBP4Q9BWG4 385 aaPredicted RBP10.77□□□□□ -0.69
RPS28-203ENST00000600659 Q9UF83 564 aa10.77□□□□□ -0.69
RPS28-203ENST00000600659 DNAH5Q8TE73 4624 aa10.76□□□□□ -0.69
RPS28-203ENST00000600659 MGST1P10620 155 aaKnown RBP10.76□□□□□ -0.69
RPS28-203ENST00000600659 TAGLN2P37802 199 aaKnown RBP10.76□□□□□ -0.69
RPS28-203ENST00000600659 RHOHQ15669 191 aa10.76□□□□□ -0.69
RPS28-203ENST00000600659 C1orf134Q5TEV5 83 aa10.76□□□□□ -0.69
RPS28-203ENST00000600659 OR10AG1Q8NH19 301 aa10.76□□□□□ -0.69
RPS28-203ENST00000600659 SFRP2Q96HF1 295 aa10.76□□□□□ -0.69
RPS28-203ENST00000600659 MED9Q9NWA0 146 aa10.76□□□□□ -0.69
RPS28-203ENST00000600659 CRYGDP07320 174 aa10.75□□□□□ -0.69
RPS28-203ENST00000600659 GNG4P50150 75 aa10.75□□□□□ -0.69
RPS28-203ENST00000600659 PCNPQ8WW12 178 aaKnown RBP10.75□□□□□ -0.69
RPS28-203ENST00000600659 PHLDA3Q9Y5J5 127 aa10.75□□□□□ -0.69
RPS28-203ENST00000600659 KIAA1109Q2LD37 5005 aa10.74□□□□□ -0.69
RPS28-203ENST00000600659 PRSS29PA6NIE9 313 aa10.74□□□□□ -0.69
RPS28-203ENST00000600659 M0R381 172 aa10.74□□□□□ -0.69
RPS28-203ENST00000600659 SIVA1O15304 175 aa10.74□□□□□ -0.69
RPS28-203ENST00000600659 WFDC10BQ8IUB3 73 aa10.74□□□□□ -0.69
RPS28-203ENST00000600659 ZFP82Q8N141 532 aa10.74□□□□□ -0.69
RPS28-203ENST00000600659 C6orf223Q8N319 242 aa10.74□□□□□ -0.69
RPS28-203ENST00000600659 C14orf178Q8N769 122 aaPredicted RBP10.74□□□□□ -0.69
RPS28-203ENST00000600659 LRP1BQ9NZR2 4599 aa10.73□□□□□ -0.69
RPS28-203ENST00000600659 A0A1W2PPQ1 181 aa10.73□□□□□ -0.69
RPS28-203ENST00000600659 RBFOX3A6NFN3 312 aa10.73□□□□□ -0.69
RPS28-203ENST00000600659 K7EN84 100 aa10.73□□□□□ -0.69
RPS28-203ENST00000600659 OR5AL1P0C617 328 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms