RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 PHLDA3Q9Y5J5 127 aa8.78□□□□□ -1
ARHGEF1-220ENST00000600274 ITPR3Q14573 2671 aa8.78□□□□□ -1
ARHGEF1-220ENST00000600274 HELZ2Q9BYK8 2649 aaKnown RBP8.77□□□□□ -1
ARHGEF1-220ENST00000600274 NACAE9PAV3 2078 aa8.77□□□□□ -1
ARHGEF1-220ENST00000600274 TRAV12-2A0A075B6T6 113 aa8.77□□□□□ -1.01
ARHGEF1-220ENST00000600274 HBDP02042 147 aa8.77□□□□□ -1.01
ARHGEF1-220ENST00000600274 IGLC6P0CF74 106 aa8.77□□□□□ -1.01
ARHGEF1-220ENST00000600274 AZU1P20160 251 aa8.77□□□□□ -1.01
ARHGEF1-220ENST00000600274 PSMG4Q5JS54 123 aa8.77□□□□□ -1.01
ARHGEF1-220ENST00000600274 C9orf139Q6ZV77 190 aa8.77□□□□□ -1.01
ARHGEF1-220ENST00000600274 MS4A6AQ9H2W1 248 aa8.77□□□□□ -1.01
ARHGEF1-220ENST00000600274 FASNP49327 2511 aaKnown RBP8.76□□□□□ -1.01
ARHGEF1-220ENST00000600274 NDUFA4O00483 81 aa8.76□□□□□ -1.01
ARHGEF1-220ENST00000600274 LINC01356Q8N9X3 169 aa8.76□□□□□ -1.01
ARHGEF1-220ENST00000600274 APCP25054 2843 aa8.76□□□□□ -1.01
ARHGEF1-220ENST00000600274 TRAV12-3A0A0B4J271 114 aa8.76□□□□□ -1.01
ARHGEF1-220ENST00000600274 AMTNQ6UX39 209 aa8.76□□□□□ -1.01
ARHGEF1-220ENST00000600274 DAZ1Q9NQZ3 744 aaKnown RBP8.76□□□□□ -1.01
ARHGEF1-220ENST00000600274 F5H697 171 aa8.76□□□□□ -1.01
ARHGEF1-220ENST00000600274 SMIM13P0DJ93 91 aa8.76□□□□□ -1.01
ARHGEF1-220ENST00000600274 FAM74A4Q5TZK3 123 aa8.76□□□□□ -1.01
ARHGEF1-220ENST00000600274 NEGR1Q7Z3B1 354 aa8.76□□□□□ -1.01
ARHGEF1-220ENST00000600274 SAMD5Q5TGI4 173 aa8.75□□□□□ -1.01
ARHGEF1-220ENST00000600274 TMEM158Q8WZ71 300 aa8.75□□□□□ -1.01
ARHGEF1-220ENST00000600274 USMG5Q96IX5 58 aa8.75□□□□□ -1.01
ARHGEF1-220ENST00000600274 A0A096LNJ9 63 aa8.75□□□□□ -1.01
ARHGEF1-220ENST00000600274 HOXA3O43365 443 aaPredicted RBP8.75□□□□□ -1.01
ARHGEF1-220ENST00000600274 ZNF493Q6ZR52 646 aa8.75□□□□□ -1.01
ARHGEF1-220ENST00000600274 RNF185Q96GF1 192 aa8.75□□□□□ -1.01
ARHGEF1-220ENST00000600274 ZC2HC1BQ5TFG8 222 aa8.74□□□□□ -1.01
ARHGEF1-220ENST00000600274 GPHB5Q86YW7 130 aa8.74□□□□□ -1.01
ARHGEF1-220ENST00000600274 JMJD8Q96S16 334 aa8.74□□□□□ -1.01
ARHGEF1-220ENST00000600274 HIVEP2P31629 2446 aa8.74□□□□□ -1.01
ARHGEF1-220ENST00000600274 ITPR2Q14571 2701 aa8.74□□□□□ -1.01
ARHGEF1-220ENST00000600274 IGHV7-4-1A0A0J9YVY3 117 aa8.74□□□□□ -1.01
ARHGEF1-220ENST00000600274 SEC11AP67812 179 aa8.74□□□□□ -1.01
ARHGEF1-220ENST00000600274 LINC01559Q495D7 138 aa8.74□□□□□ -1.01
ARHGEF1-220ENST00000600274 LINC01545Q5VT33 79 aa8.74□□□□□ -1.01
ARHGEF1-220ENST00000600274 TMEM190Q8WZ59 177 aa8.74□□□□□ -1.01
ARHGEF1-220ENST00000600274 HIST1H4GQ99525 98 aa8.74□□□□□ -1.01
ARHGEF1-220ENST00000600274 TSSC4Q9Y5U2 329 aaPredicted RBP8.74□□□□□ -1.01
ARHGEF1-220ENST00000600274 TRAV26-1A0A087WT03 109 aa8.74□□□□□ -1.01
ARHGEF1-220ENST00000600274 ASIPP42127 132 aa8.73□□□□□ -1.01
ARHGEF1-220ENST00000600274 Q96MF0 132 aa8.73□□□□□ -1.01
ARHGEF1-220ENST00000600274 A0A087WWL8 130 aa8.73□□□□□ -1.01
ARHGEF1-220ENST00000600274 TEX48A0A1B0GUV7 120 aa8.73□□□□□ -1.01
ARHGEF1-220ENST00000600274 C9orf118A6NHY6 69 aa8.73□□□□□ -1.01
ARHGEF1-220ENST00000600274 C2orf91Q6ZV80 131 aa8.73□□□□□ -1.01
ARHGEF1-220ENST00000600274 ZNF575Q86XF7 245 aa8.73□□□□□ -1.01
ARHGEF1-220ENST00000600274 JPT2Q9H910 190 aa8.73□□□□□ -1.01
ARHGEF1-220ENST00000600274 NIPBLQ6KC79 2804 aaeCLIP8.73□□□□□ -1.01
ARHGEF1-220ENST00000600274 TRAV21A0A0B4J279 112 aa8.73□□□□□ -1.01
ARHGEF1-220ENST00000600274 CD7P09564 240 aa8.73□□□□□ -1.01
ARHGEF1-220ENST00000600274 SH2D6Q7Z4S9 175 aa8.73□□□□□ -1.01
ARHGEF1-220ENST00000600274 RPL39LQ96EH5 51 aaKnown RBP8.73□□□□□ -1.01
ARHGEF1-220ENST00000600274 FN1P02751 2386 aaKnown RBP8.73□□□□□ -1.01
ARHGEF1-220ENST00000600274 LOC107984156A0A0G2JMH3 177 aa8.72□□□□□ -1.01
ARHGEF1-220ENST00000600274 HSD52Q0P140 79 aa8.72□□□□□ -1.01
ARHGEF1-220ENST00000600274 C9orf47Q6ZRZ4 202 aa8.72□□□□□ -1.01
ARHGEF1-220ENST00000600274 C18orf65Q6ZTR6 163 aa8.72□□□□□ -1.01
ARHGEF1-220ENST00000600274 ARL17AQ8IVW1 177 aa8.72□□□□□ -1.01
ARHGEF1-220ENST00000600274 KLK9Q9UKQ9 250 aa8.72□□□□□ -1.01
ARHGEF1-220ENST00000600274 U3KQE9 123 aa8.72□□□□□ -1.01
ARHGEF1-220ENST00000600274 A0A1W2PRX2 142 aa8.72□□□□□ -1.01
ARHGEF1-220ENST00000600274 RBAKDNA6NC62 111 aa8.72□□□□□ -1.01
ARHGEF1-220ENST00000600274 SLC25A16P16260 332 aa8.72□□□□□ -1.01
ARHGEF1-220ENST00000600274 FXYD2P54710 66 aa8.72□□□□□ -1.01
ARHGEF1-220ENST00000600274 FAM159AQ6UWV7 190 aa8.72□□□□□ -1.01
ARHGEF1-220ENST00000600274 ZNF843Q8N446 348 aa8.72□□□□□ -1.01
ARHGEF1-220ENST00000600274 MYOZ3Q8TDC0 251 aa8.72□□□□□ -1.01
ARHGEF1-220ENST00000600274 SMPXQ9UHP9 88 aa8.72□□□□□ -1.01
ARHGEF1-220ENST00000600274 EMP1P54849 157 aa8.71□□□□□ -1.01
ARHGEF1-220ENST00000600274 SPINK13Q1W4C9 94 aa8.71□□□□□ -1.01
ARHGEF1-220ENST00000600274 SCGB1D4Q6XE38 83 aa8.71□□□□□ -1.01
ARHGEF1-220ENST00000600274 ZFAND2AQ8N6M9 145 aa8.71□□□□□ -1.01
ARHGEF1-220ENST00000600274 OVOL1O14753 267 aa8.71□□□□□ -1.01
ARHGEF1-220ENST00000600274 CKS1BP61024 79 aa8.71□□□□□ -1.01
ARHGEF1-220ENST00000600274 ETDBQ3ZM63 59 aa8.71□□□□□ -1.01
ARHGEF1-220ENST00000600274 LINC00477Q96M19 166 aa8.71□□□□□ -1.01
ARHGEF1-220ENST00000600274 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.71□□□□□ -1.02
ARHGEF1-220ENST00000600274 SMIM17P0DL12 118 aa8.71□□□□□ -1.02
ARHGEF1-220ENST00000600274 TMEM8BA6NDV4 472 aa8.7□□□□□ -1.02
ARHGEF1-220ENST00000600274 C19orf54Q5BKX5 351 aa8.7□□□□□ -1.02
ARHGEF1-220ENST00000600274 IGHV4OR15-8A0A075B7B6 117 aa8.7□□□□□ -1.02
ARHGEF1-220ENST00000600274 A0A087WW49 117 aa8.7□□□□□ -1.02
ARHGEF1-220ENST00000600274 IGKV2D-26A0A0A0MRZ7 120 aa8.7□□□□□ -1.02
ARHGEF1-220ENST00000600274 ID1P41134 155 aa8.7□□□□□ -1.02
ARHGEF1-220ENST00000600274 SS18L2Q9UHA2 77 aa8.7□□□□□ -1.02
ARHGEF1-220ENST00000600274 UBR5O95071 2799 aaPredicted RBP8.7□□□□□ -1.02
ARHGEF1-220ENST00000600274 H3BMG7 143 aa8.7□□□□□ -1.02
ARHGEF1-220ENST00000600274 CRXO43186 299 aaPredicted RBP8.7□□□□□ -1.02
ARHGEF1-220ENST00000600274 SRSF1Q07955 248 aaKnown RBP eCLIP8.7□□□□□ -1.025e-7■■■□□ 17.2
ARHGEF1-220ENST00000600274 SRSF9Q13242 221 aaKnown RBP eCLIP8.7□□□□□ -1.02
ARHGEF1-220ENST00000600274 ADAMTSL5Q6ZMM2 481 aa8.7□□□□□ -1.02
ARHGEF1-220ENST00000600274 A6NJY4 79 aa8.69□□□□□ -1.02
ARHGEF1-220ENST00000600274 H3BRM9 83 aa8.69□□□□□ -1.02
ARHGEF1-220ENST00000600274 H7C2G1 150 aa8.69□□□□□ -1.02
ARHGEF1-220ENST00000600274 SLURP1P55000 103 aa8.69□□□□□ -1.02
ARHGEF1-220ENST00000600274 ZNF418Q8TF45 676 aaPredicted RBP8.69□□□□□ -1.02
ARHGEF1-220ENST00000600274 CHAC1Q9BUX1 264 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms