RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 TRGV4A0A0C4DH28 118 aa10.57□□□□□ -0.72
LIG1-219ENST00000600055 RAB19A4D1S5 217 aa10.57□□□□□ -0.72
LIG1-219ENST00000600055 H3BNG1 76 aa10.57□□□□□ -0.72
LIG1-219ENST00000600055 PAX4O43316 350 aa10.57□□□□□ -0.72
LIG1-219ENST00000600055 CRYBA4P53673 196 aa10.57□□□□□ -0.72
LIG1-219ENST00000600055 RNF212Q495C1 297 aa10.57□□□□□ -0.72
LIG1-219ENST00000600055 ZNF876PQ49A33 203 aa10.57□□□□□ -0.72
LIG1-219ENST00000600055 HHLA3Q9XRX5 114 aa10.57□□□□□ -0.72
LIG1-219ENST00000600055 DNAH6Q9C0G6 4158 aa10.56□□□□□ -0.72
LIG1-219ENST00000600055 A0A096LPF7 62 aa10.56□□□□□ -0.72
LIG1-219ENST00000600055 TMEM250H0YL14 139 aa10.56□□□□□ -0.72
LIG1-219ENST00000600055 H3BVH4 76 aa10.56□□□□□ -0.72
LIG1-219ENST00000600055 RPL19P84098 196 aaKnown RBP10.56□□□□□ -0.72
LIG1-219ENST00000600055 LINC01559Q495D7 138 aa10.56□□□□□ -0.72
LIG1-219ENST00000600055 CENPWQ5EE01 88 aa10.56□□□□□ -0.72
LIG1-219ENST00000600055 PRR27Q6MZM9 219 aa10.56□□□□□ -0.72
LIG1-219ENST00000600055 MED9Q9NWA0 146 aa10.56□□□□□ -0.72
LIG1-219ENST00000600055 PRO0255Q9UI72 69 aa10.56□□□□□ -0.72
LIG1-219ENST00000600055 LINC00588Q9Y4M8 146 aa10.56□□□□□ -0.72
LIG1-219ENST00000600055 IGLV2-18A0A075B6J9 118 aa10.55□□□□□ -0.72
LIG1-219ENST00000600055 M0R2N4 97 aa10.55□□□□□ -0.72
LIG1-219ENST00000600055 RS1O15537 224 aa10.55□□□□□ -0.72
LIG1-219ENST00000600055 IGLV2-8P01709 118 aa10.55□□□□□ -0.72
LIG1-219ENST00000600055 ARMS2P0C7Q2 107 aa10.55□□□□□ -0.72
LIG1-219ENST00000600055 TOR2AQ5JU69 321 aa10.55□□□□□ -0.72
LIG1-219ENST00000600055 DNLZQ5SXM8 178 aa10.55□□□□□ -0.72
LIG1-219ENST00000600055 PCNPQ8WW12 178 aaKnown RBP10.55□□□□□ -0.72
LIG1-219ENST00000600055 MUC4Q99102 2169 aa10.55□□□□□ -0.72
LIG1-219ENST00000600055 IGHV3-73A0A0B4J1V6 119 aa10.54□□□□□ -0.72
LIG1-219ENST00000600055 CCL18P55774 89 aa10.54□□□□□ -0.72
LIG1-219ENST00000600055 SLAQ13239 276 aa10.54□□□□□ -0.72
LIG1-219ENST00000600055 ESRGQ1W209 222 aa10.54□□□□□ -0.72
LIG1-219ENST00000600055 CFAP126Q5VTH2 177 aa10.54□□□□□ -0.72
LIG1-219ENST00000600055 PTH2Q96A98 100 aa10.54□□□□□ -0.72
LIG1-219ENST00000600055 IL36BQ9NZH7 164 aa10.54□□□□□ -0.72
LIG1-219ENST00000600055 TRBV20OR9-2A0A075B6H5 130 aa10.53□□□□□ -0.72
LIG1-219ENST00000600055 MGST1P10620 155 aaKnown RBP10.53□□□□□ -0.72
LIG1-219ENST00000600055 JPT2Q9H910 190 aa10.53□□□□□ -0.72
LIG1-219ENST00000600055 LOC100131303A0A0U1RQF7 123 aa10.52□□□□□ -0.73
LIG1-219ENST00000600055 GATA1P15976 413 aaPredicted RBP10.52□□□□□ -0.73
LIG1-219ENST00000600055 GNG4P50150 75 aa10.52□□□□□ -0.73
LIG1-219ENST00000600055 DMRTA1Q5VZB9 504 aa10.52□□□□□ -0.73
LIG1-219ENST00000600055 ZNRF2Q8NHG8 242 aa10.52□□□□□ -0.73
LIG1-219ENST00000600055 SCRT2Q9NQ03 307 aa10.52□□□□□ -0.73
LIG1-219ENST00000600055 BIN3Q9NQY0 253 aa10.52□□□□□ -0.73
LIG1-219ENST00000600055 ICOSQ9Y6W8 199 aa10.52□□□□□ -0.73
LIG1-219ENST00000600055 GYPEP15421 78 aa10.51□□□□□ -0.73
LIG1-219ENST00000600055 FAM3BP58499 235 aaPredicted RBP10.51□□□□□ -0.73
LIG1-219ENST00000600055 UQCC3Q6UW78 93 aa10.51□□□□□ -0.73
LIG1-219ENST00000600055 SMIM12Q96EX1 92 aa10.51□□□□□ -0.73
LIG1-219ENST00000600055 K7EQD1 137 aa10.5□□□□□ -0.73
LIG1-219ENST00000600055 MRPL23Q16540 153 aaKnown RBP10.5□□□□□ -0.73
LIG1-219ENST00000600055 FAM74A3Q4VXF1 159 aa10.5□□□□□ -0.73
LIG1-219ENST00000600055 SAMD10Q9BYL1 202 aa10.5□□□□□ -0.73
LIG1-219ENST00000600055 PARLQ9H300 379 aa10.5□□□□□ -0.73
LIG1-219ENST00000600055 PHLDA3Q9Y5J5 127 aa10.5□□□□□ -0.73
LIG1-219ENST00000600055 NACAE9PAV3 2078 aa10.49□□□□□ -0.73
LIG1-219ENST00000600055 C19orf71A6NCJ1 209 aa10.49□□□□□ -0.73
LIG1-219ENST00000600055 M0R381 172 aa10.49□□□□□ -0.73
LIG1-219ENST00000600055 CEBPGP53567 150 aa10.49□□□□□ -0.73
LIG1-219ENST00000600055 PIK3CD-AS1Q5SR53 167 aa10.49□□□□□ -0.73
LIG1-219ENST00000600055 Q6ZSN1 163 aa10.49□□□□□ -0.73
LIG1-219ENST00000600055 SLC25A29Q8N8R3 303 aa10.49□□□□□ -0.73
LIG1-219ENST00000600055 SYT8Q8NBV8 401 aa10.49□□□□□ -0.73
LIG1-219ENST00000600055 MUC21A0A0G2JKD1 596 aa10.48□□□□□ -0.73
LIG1-219ENST00000600055 MUC21A0A140T8X8 626 aa10.48□□□□□ -0.73
LIG1-219ENST00000600055 LINC00862A6NCI5 91 aa10.48□□□□□ -0.73
LIG1-219ENST00000600055 A8MWV9 139 aa10.48□□□□□ -0.73
LIG1-219ENST00000600055 SRP19P09132 144 aaKnown RBP10.48□□□□□ -0.73
LIG1-219ENST00000600055 CXCL1P09341 107 aa10.48□□□□□ -0.73
LIG1-219ENST00000600055 GZMBP10144 247 aa10.48□□□□□ -0.73
LIG1-219ENST00000600055 UFSP1Q6NVU6 142 aa10.48□□□□□ -0.73
LIG1-219ENST00000600055 Q6ZR54 194 aa10.48□□□□□ -0.73
LIG1-219ENST00000600055 DAZAP1Q96EP5 407 aaKnown RBP10.48□□□□□ -0.73
LIG1-219ENST00000600055 MRPS16Q9Y3D3 137 aaKnown RBP10.48□□□□□ -0.73
LIG1-219ENST00000600055 ZNF727A8MUV8 499 aa10.47□□□□□ -0.73
LIG1-219ENST00000600055 CIDEAO60543 219 aa10.47□□□□□ -0.73
LIG1-219ENST00000600055 MED14OSP0DP75 135 aa10.47□□□□□ -0.73
LIG1-219ENST00000600055 SRIP30626 198 aa10.47□□□□□ -0.73
LIG1-219ENST00000600055 SOHLH1Q5JUK2 328 aa10.47□□□□□ -0.73
LIG1-219ENST00000600055 LYPD5Q6UWN5 251 aa10.47□□□□□ -0.73
LIG1-219ENST00000600055 NEGR1Q7Z3B1 354 aa10.47□□□□□ -0.73
LIG1-219ENST00000600055 OR10AG1Q8NH19 301 aa10.47□□□□□ -0.73
LIG1-219ENST00000600055 OCC1Q8TAD7 63 aa10.47□□□□□ -0.73
LIG1-219ENST00000600055 Q9H8V8 135 aa10.47□□□□□ -0.73
LIG1-219ENST00000600055 A0A087WWL8 130 aa10.46□□□□□ -0.73
LIG1-219ENST00000600055 K7EN84 100 aa10.46□□□□□ -0.73
LIG1-219ENST00000600055 SNAI2O43623 268 aa10.46□□□□□ -0.73
LIG1-219ENST00000600055 SSTP61278 116 aa10.46□□□□□ -0.73
LIG1-219ENST00000600055 ZFP2Q6ZN57 461 aa10.46□□□□□ -0.73
LIG1-219ENST00000600055 COMMD7Q86VX2 200 aa10.46□□□□□ -0.73
LIG1-219ENST00000600055 ZFP82Q8N141 532 aa10.46□□□□□ -0.73
LIG1-219ENST00000600055 OR2D3Q8NGH3 330 aa10.46□□□□□ -0.73
LIG1-219ENST00000600055 SFRP2Q96HF1 295 aa10.46□□□□□ -0.73
LIG1-219ENST00000600055 SMIM7Q9BQ49 75 aa10.46□□□□□ -0.73
LIG1-219ENST00000600055 UPK3BQ9BT76 320 aa10.46□□□□□ -0.73
LIG1-219ENST00000600055 SSBP4Q9BWG4 385 aaPredicted RBP10.46□□□□□ -0.73
LIG1-219ENST00000600055 LY96Q9Y6Y9 160 aa10.46□□□□□ -0.73
LIG1-219ENST00000600055 DNAH10Q8IVF4 4471 aa10.46□□□□□ -0.74
LIG1-219ENST00000600055 NBDYA0A0U1RRE5 68 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms